BLASTX nr result

ID: Zingiber24_contig00027329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00027329
         (384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ22769.1| hypothetical protein PRUPE_ppa024649mg, partial [...   109   4e-22
ref|XP_002302793.1| glycoside hydrolase family 28 family protein...   109   4e-22
ref|XP_002320271.2| hypothetical protein POPTR_0014s11110g [Popu...   108   6e-22
ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricin...   107   2e-21
ref|XP_002307031.2| hypothetical protein POPTR_0005s00720g [Popu...   106   3e-21
ref|XP_002318932.2| hypothetical protein POPTR_0013s00640g [Popu...   106   3e-21
ref|XP_002330008.1| predicted protein [Populus trichocarpa]           106   3e-21
ref|XP_003518665.1| PREDICTED: polygalacturonase At1g48100-like ...   106   4e-21
ref|XP_004229555.1| PREDICTED: polygalacturonase At1g48100-like ...   105   6e-21
gb|EXB93148.1| Polygalacturonase [Morus notabilis]                    105   8e-21
ref|XP_006349249.1| PREDICTED: polygalacturonase At1g48100-like ...   105   8e-21
ref|XP_003536857.1| PREDICTED: polygalacturonase At1g48100-like ...   105   8e-21
ref|XP_002272733.2| PREDICTED: polygalacturonase At1g48100-like ...   103   2e-20
emb|CBI37004.3| unnamed protein product [Vitis vinifera]              103   2e-20
gb|EXB50292.1| Polygalacturonase [Morus notabilis]                    103   3e-20
gb|ESW30872.1| hypothetical protein PHAVU_002G189400g [Phaseolus...   103   3e-20
ref|XP_003531109.1| PREDICTED: polygalacturonase At1g48100-like ...   102   4e-20
ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Viti...   102   4e-20
ref|XP_004494454.1| PREDICTED: polygalacturonase At1g48100-like ...   102   5e-20
ref|XP_004163976.1| PREDICTED: polygalacturonase At1g48100-like ...   102   5e-20

>gb|EMJ22769.1| hypothetical protein PRUPE_ppa024649mg, partial [Prunus persica]
          Length = 437

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/75 (66%), Positives = 58/75 (77%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNG 338
           GV  V SFGAVGDG +DDTEAFK AWD+AC+ E    I+ PRG+SF I+S IF GPC  G
Sbjct: 40  GVFDVRSFGAVGDGQTDDTEAFKMAWDTACQSESAARILVPRGFSFMIQSTIFTGPCLGG 99

Query: 339 LVLQVDGTIMAPDGP 383
           LVLQVDGT++ PDGP
Sbjct: 100 LVLQVDGTLVPPDGP 114


>ref|XP_002302793.1| glycoside hydrolase family 28 family protein [Populus trichocarpa]
           gi|222844519|gb|EEE82066.1| glycoside hydrolase family
           28 family protein [Populus trichocarpa]
          Length = 457

 Score =  109 bits (272), Expect = 4e-22
 Identities = 46/75 (61%), Positives = 60/75 (80%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNG 338
           GV  V +FGA+GDG+ DDT+AFK AWD+AC + +P VI+ P G+ F I+S IF+GPC++G
Sbjct: 67  GVFDVRNFGAIGDGIIDDTDAFKMAWDAACNQVDPAVILVPYGFDFMIQSTIFSGPCKDG 126

Query: 339 LVLQVDGTIMAPDGP 383
           LV QVDGT+M PDGP
Sbjct: 127 LVFQVDGTLMPPDGP 141


>ref|XP_002320271.2| hypothetical protein POPTR_0014s11110g [Populus trichocarpa]
           gi|550323965|gb|EEE98586.2| hypothetical protein
           POPTR_0014s11110g [Populus trichocarpa]
          Length = 526

 Score =  108 bits (271), Expect = 6e-22
 Identities = 46/75 (61%), Positives = 59/75 (78%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNG 338
           GV  V SFGA+GDG++DDT+AFK AWD+AC +++  VI+ P G+ F I+S IF GPC+ G
Sbjct: 129 GVFDVRSFGAIGDGITDDTDAFKMAWDAACNQDDSAVILVPYGFEFMIQSTIFTGPCQGG 188

Query: 339 LVLQVDGTIMAPDGP 383
           LV QVDGT+M PDGP
Sbjct: 189 LVFQVDGTLMPPDGP 203


>ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223548521|gb|EEF50012.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 470

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V +V+SFGAVGDG SDDT+AFK AWDSAC + E  +++AP  YSF I+  IF GPC++ L
Sbjct: 74  VFNVLSFGAVGDGASDDTQAFKMAWDSACSQNESSILLAPSRYSFLIQPTIFTGPCKSNL 133

Query: 342 VLQVDGTIMAPDGP 383
           V Q+DGTIM PDGP
Sbjct: 134 VFQIDGTIMPPDGP 147


>ref|XP_002307031.2| hypothetical protein POPTR_0005s00720g [Populus trichocarpa]
           gi|550337647|gb|EEE94027.2| hypothetical protein
           POPTR_0005s00720g [Populus trichocarpa]
          Length = 482

 Score =  106 bits (265), Expect = 3e-21
 Identities = 46/74 (62%), Positives = 59/74 (79%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V++V+SFGAVGDGV+DDT+AFK AWD+AC + E  +++AP  YSF I+  IF GPC+  L
Sbjct: 77  VYNVLSFGAVGDGVTDDTQAFKMAWDTACLQNESAILLAPDDYSFMIQPTIFTGPCKTSL 136

Query: 342 VLQVDGTIMAPDGP 383
           V Q+DGTIM PDGP
Sbjct: 137 VFQIDGTIMPPDGP 150


>ref|XP_002318932.2| hypothetical protein POPTR_0013s00640g [Populus trichocarpa]
           gi|550324639|gb|EEE94855.2| hypothetical protein
           POPTR_0013s00640g [Populus trichocarpa]
          Length = 481

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/74 (60%), Positives = 59/74 (79%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V++V+SFGAVGDG +DDT+AFK AWD+AC + EP +++AP  YSF I+  +F GPC+  L
Sbjct: 79  VYNVLSFGAVGDGDTDDTQAFKMAWDTACFQNEPAILLAPDDYSFMIQPTVFTGPCKTSL 138

Query: 342 VLQVDGTIMAPDGP 383
           V Q+DGTIM PDGP
Sbjct: 139 VFQIDGTIMPPDGP 152


>ref|XP_002330008.1| predicted protein [Populus trichocarpa]
          Length = 408

 Score =  106 bits (265), Expect = 3e-21
 Identities = 46/74 (62%), Positives = 59/74 (79%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V++V+SFGAVGDGV+DDT+AFK AWD+AC + E  +++AP  YSF I+  IF GPC+  L
Sbjct: 21  VYNVLSFGAVGDGVTDDTQAFKMAWDTACLQNESAILLAPDDYSFMIQPTIFTGPCKTSL 80

Query: 342 VLQVDGTIMAPDGP 383
           V Q+DGTIM PDGP
Sbjct: 81  VFQIDGTIMPPDGP 94


>ref|XP_003518665.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 473

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/72 (65%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = +3

Query: 171 VMSFGAVGDGVSDDTEAFKSAWDSACEEEEP-GVIVAPRGYSFKIRSIIFAGPCRNGLVL 347
           V +FGA+GDG++DDTE+FK AWD+ACE E P  VI+ P+G+SF I+S IF GPC+ GLVL
Sbjct: 79  VRTFGAIGDGITDDTESFKMAWDTACESESPVKVILVPQGFSFVIQSTIFTGPCKGGLVL 138

Query: 348 QVDGTIMAPDGP 383
           +VDGT+M PDGP
Sbjct: 139 KVDGTLMPPDGP 150


>ref|XP_004229555.1| PREDICTED: polygalacturonase At1g48100-like [Solanum lycopersicum]
          Length = 475

 Score =  105 bits (262), Expect = 6e-21
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNG 338
           GV+ V SFGAVGDGV+DDTE FK+AWD+AC+ +   VI  P GYSF I+S IF GPC++G
Sbjct: 74  GVYDVRSFGAVGDGVTDDTEGFKAAWDAACQVQS-AVIHVPLGYSFMIQSTIFTGPCQSG 132

Query: 339 LVLQVDGTIMAPDGP 383
           LV Q++GTIM PDGP
Sbjct: 133 LVFQLEGTIMPPDGP 147


>gb|EXB93148.1| Polygalacturonase [Morus notabilis]
          Length = 464

 Score =  105 bits (261), Expect = 8e-21
 Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = +3

Query: 153 KLGVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCR 332
           K+ V +V +FGAVGDGVSD+T+AFK AWD+AC+ E+P +++ P  Y+F I S IF GPC+
Sbjct: 64  KINVFNVRAFGAVGDGVSDETQAFKMAWDTACQAEDPSILLVPHSYTFMIHSTIFTGPCK 123

Query: 333 NG-LVLQVDGTIMAPDGP 383
           +  L LQ+DGT+M PDGP
Sbjct: 124 SSDLTLQIDGTLMPPDGP 141


>ref|XP_006349249.1| PREDICTED: polygalacturonase At1g48100-like [Solanum tuberosum]
          Length = 472

 Score =  105 bits (261), Expect = 8e-21
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNG 338
           GV+ V SFGAVGDGV+DDTE FK+AWD+AC+ +   VI  P GYSF I+S IF GPC++G
Sbjct: 71  GVYDVRSFGAVGDGVTDDTEGFKAAWDAACQVDS-AVIHVPVGYSFMIQSTIFTGPCQSG 129

Query: 339 LVLQVDGTIMAPDGP 383
           LV Q++GTIM PDGP
Sbjct: 130 LVFQLEGTIMPPDGP 144


>ref|XP_003536857.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 475

 Score =  105 bits (261), Expect = 8e-21
 Identities = 46/72 (63%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = +3

Query: 171 VMSFGAVGDGVSDDTEAFKSAWDSACEEEEP-GVIVAPRGYSFKIRSIIFAGPCRNGLVL 347
           V +FGA+GDG++DDTE+FK AWD+AC+ E P  VI+ P+G+SF I+S IF GPC+ GLVL
Sbjct: 81  VRTFGAIGDGITDDTESFKMAWDTACQSESPVKVILVPQGFSFVIQSTIFTGPCKGGLVL 140

Query: 348 QVDGTIMAPDGP 383
           +VDGT+M PDGP
Sbjct: 141 KVDGTLMPPDGP 152


>ref|XP_002272733.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
          Length = 465

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V  V SFGAVG+G++DDT+AFK+AWD+AC+ EE  ++  P GYSF I+S IF GPC++ L
Sbjct: 69  VFDVRSFGAVGNGIADDTQAFKAAWDTACQVEESAIVFVPYGYSFMIQSTIFTGPCQSRL 128

Query: 342 VLQVDGTIMAPDGP 383
           V QVDGT+  PDGP
Sbjct: 129 VFQVDGTLTPPDGP 142


>emb|CBI37004.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V  V SFGAVG+G++DDT+AFK+AWD+AC+ EE  ++  P GYSF I+S IF GPC++ L
Sbjct: 88  VFDVRSFGAVGNGIADDTQAFKAAWDTACQVEESAIVFVPYGYSFMIQSTIFTGPCQSRL 147

Query: 342 VLQVDGTIMAPDGP 383
           V QVDGT+  PDGP
Sbjct: 148 VFQVDGTLTPPDGP 161


>gb|EXB50292.1| Polygalacturonase [Morus notabilis]
          Length = 483

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPG-VIVAPRGYSFKIRSIIFAGPCRN 335
           GV  V  FGA GDGV+DDT+AFK AWD+AC+ +    +I+ PRG+SF I+S IF GPC++
Sbjct: 83  GVFDVRKFGAAGDGVTDDTDAFKMAWDTACQSDSASSLILVPRGFSFMIQSTIFTGPCKS 142

Query: 336 GLVLQVDGTIMAPDGP 383
            LV QVDGT+M PDGP
Sbjct: 143 SLVFQVDGTVMPPDGP 158


>gb|ESW30872.1| hypothetical protein PHAVU_002G189400g [Phaseolus vulgaris]
          Length = 479

 Score =  103 bits (256), Expect = 3e-20
 Identities = 48/74 (64%), Positives = 58/74 (78%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V  V SFGAVGDG +DDT AF++AW +AC  E  G+++AP  YSFKI S IF+GPC+ GL
Sbjct: 83  VFDVRSFGAVGDGCADDTPAFRAAWKAACAVES-GILLAPENYSFKITSTIFSGPCKPGL 141

Query: 342 VLQVDGTIMAPDGP 383
           V QVDGT+MAPDGP
Sbjct: 142 VFQVDGTLMAPDGP 155


>ref|XP_003531109.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 484

 Score =  102 bits (255), Expect = 4e-20
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V  V SFGAVGDG +DDT AF++AW +AC  +  G+++AP  YSFKI S IF+GPC+ GL
Sbjct: 88  VFDVRSFGAVGDGCADDTRAFRAAWKAACAVDS-GIVLAPENYSFKITSTIFSGPCKPGL 146

Query: 342 VLQVDGTIMAPDGP 383
           V QVDGT+MAPDGP
Sbjct: 147 VFQVDGTLMAPDGP 160


>ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|296089826|emb|CBI39645.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  102 bits (255), Expect = 4e-20
 Identities = 46/74 (62%), Positives = 59/74 (79%)
 Frame = +3

Query: 162 VHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEPGVIVAPRGYSFKIRSIIFAGPCRNGL 341
           V +V SFGAVGDGV+DDT+AFK  WD+AC+ E   ++V P G+SF I+S IF GPC+ GL
Sbjct: 69  VFNVRSFGAVGDGVTDDTQAFKMTWDTACQAESATLLV-PHGHSFMIQSTIFTGPCKTGL 127

Query: 342 VLQVDGTIMAPDGP 383
           + Q++GTIMAPDGP
Sbjct: 128 IFQIEGTIMAPDGP 141


>ref|XP_004494454.1| PREDICTED: polygalacturonase At1g48100-like [Cicer arietinum]
          Length = 456

 Score =  102 bits (254), Expect = 5e-20
 Identities = 45/76 (59%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = +3

Query: 159 GVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEE-EPGVIVAPRGYSFKIRSIIFAGPCRN 335
           G+  V SFGA+GDG  DDTE+FK AWD+AC+ + E  VI+ P+G+SF ++SIIF GPC+ 
Sbjct: 58  GIFDVRSFGAIGDGKKDDTESFKMAWDTACQSQLEDNVILVPQGFSFIVQSIIFTGPCQG 117

Query: 336 GLVLQVDGTIMAPDGP 383
            LV +VDGT+M PDGP
Sbjct: 118 DLVFKVDGTVMPPDGP 133


>ref|XP_004163976.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 483

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
 Frame = +3

Query: 147 LTKLGVHSVMSFGAVGDGVSDDTEAFKSAWDSACEEEEP------GVIVAPRGYSFKIRS 308
           +    +  V  FGA+GDG +DDT AFK AWD+AC+  +       GVI+ P G+SF I+S
Sbjct: 79  INSTSIFDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDNNDDYGVILVPYGFSFMIQS 138

Query: 309 IIFAGPCRNGLVLQVDGTIMAPDGP 383
            IF GPC+NG+V QVDGT+MAPDGP
Sbjct: 139 TIFTGPCKNGVVFQVDGTLMAPDGP 163


Top