BLASTX nr result

ID: Zingiber24_contig00027255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00027255
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ90706.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   6e-06

>dbj|BAJ90706.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 276

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/109 (30%), Positives = 50/109 (45%)
 Frame = -2

Query: 417 HNGGDDLPEFYTPDKGNSYFQYGDEHARSLGLHKIRNDHTGSVGAHEIRNYIPDLEKTTK 238
           +N  DD     TP   NS F +  E A++             V   ++  Y+    +   
Sbjct: 186 NNSSDDFDGLDTPRSKNSCFSFTHEPAKA-------------VNNCDVHQYLRSFSRVIS 232

Query: 237 SIEGVKEESTYNAKDYSSNPSDESLLFEKVTFRNRINFGGILVCSINTF 91
                KE S Y A DY    + E+ L +KV F+NRI +GG+++C+I TF
Sbjct: 233 -----KERSNYCADDYDVQKASENRLTDKVAFKNRIEYGGLVLCNIRTF 276


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