BLASTX nr result
ID: Zingiber24_contig00027178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027178
(949 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004953239.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 117 5e-24
ref|XP_006396578.1| hypothetical protein EUTSA_v10028914mg [Eutr... 115 2e-23
gb|ACN25943.1| unknown [Zea mays] gi|413919011|gb|AFW58943.1| pu... 115 2e-23
ref|NP_001152715.1| ring domain containing protein [Zea mays] gi... 115 2e-23
ref|XP_006652556.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 114 5e-23
ref|XP_006652555.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 114 5e-23
ref|XP_004506547.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 114 5e-23
ref|NP_001053390.1| Os04g0530500 [Oryza sativa Japonica Group] g... 113 9e-23
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 112 2e-22
ref|XP_006358981.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-... 112 2e-22
ref|XP_004976324.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 112 2e-22
ref|NP_192260.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis t... 111 4e-22
ref|XP_006350052.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 111 4e-22
ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 111 4e-22
ref|XP_004134706.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 111 4e-22
ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|2235417... 111 4e-22
ref|XP_006376502.1| zinc finger family protein [Populus trichoca... 111 5e-22
ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H... 111 5e-22
ref|XP_002330679.1| predicted protein [Populus trichocarpa] 111 5e-22
ref|XP_002305139.1| putative RING family protein [Populus tricho... 111 5e-22
>ref|XP_004953239.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
[Setaria italica] gi|514715415|ref|XP_004953240.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
isoform X2 [Setaria italica]
gi|514715419|ref|XP_004953241.1| PREDICTED: E3
ubiquitin-protein ligase RMA1H1-like isoform X3 [Setaria
italica]
Length = 252
Score = 117 bits (294), Expect = 5e-24
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 10/128 (7%)
Frame = -3
Query: 851 GVGVCSCAQAMDKPSMKEPPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHLY 672
G G A A D+P+ + +G PA + CFDCNIC +CA EPVVTLCGHLY
Sbjct: 8 GAGEQPAAAAGDEPAKR-------VVGGDAPAATGGGCFDCNICLECAAEPVVTLCGHLY 60
Query: 671 CWPCVYQWMQLE------SISHKQCPVCKARLSQDTLVPLYGCG---RLQQTAAKG-DSD 522
CWPC+Y+W++ + S + ++CPVCKA +S D LVPLYG G R ++ +G S
Sbjct: 61 CWPCIYEWLRPDADADAGSSARRRCPVCKAAVSPDALVPLYGRGGSSRAKKPPPRGLASS 120
Query: 521 VPRRPTTR 498
+PRRP R
Sbjct: 121 IPRRPALR 128
>ref|XP_006396578.1| hypothetical protein EUTSA_v10028914mg [Eutrema salsugineum]
gi|557097595|gb|ESQ38031.1| hypothetical protein
EUTSA_v10028914mg [Eutrema salsugineum]
Length = 246
Score = 115 bits (289), Expect = 2e-23
Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Frame = -3
Query: 854 HGVGVCSCAQAMDKPSMKEPPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHL 675
+G G + +P PS+ S ++ FDCNIC D EPVVTLCGHL
Sbjct: 17 YGEGAFCFKNSKPEPITASVPSDDSN----------ESNFDCNICLDSVQEPVVTLCGHL 66
Query: 674 YCWPCVYQWMQLESIS-------HKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGDSDVP 516
+CWPC+++W+ ++S S H++CPVCK+++S TLVPLYG GR T KG S VP
Sbjct: 67 FCWPCIHKWLNVQSFSTSDEYQRHRECPVCKSKVSHSTLVPLYGRGRC-NTQDKGISSVP 125
Query: 515 RRPTTRMPYDHAPFSYPMHQQQPQFHQDN 429
RRP R+ + +S + + H +N
Sbjct: 126 RRPVYRLEMPSSSYSSTDLRLSQRVHFNN 154
>gb|ACN25943.1| unknown [Zea mays] gi|413919011|gb|AFW58943.1| putative RING zinc
finger domain superfamily protein isoform 1 [Zea mays]
gi|413919012|gb|AFW58944.1| putative RING zinc finger
domain superfamily protein isoform 2 [Zea mays]
Length = 261
Score = 115 bits (289), Expect = 2e-23
Identities = 83/247 (33%), Positives = 103/247 (41%), Gaps = 54/247 (21%)
Frame = -3
Query: 830 AQAMDKPSMKEPPSNSSTLGVTEPARSVDA----------CFDCNICFDCAVEPVVTLCG 681
A MD+P M S TEP + CFDCNIC D A EPVVTLCG
Sbjct: 3 AGRMDQPCMASINSQPFVAD-TEPVKKASGDMPAAPTGSGCFDCNICLDFAAEPVVTLCG 61
Query: 680 HLYCWPCVYQWMQ--LESI-------SHKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGD 528
HLYCWPC+Y+W++ +ES + +QCPVCKA LS DTLVPLYG G + + G
Sbjct: 62 HLYCWPCIYEWLRPGVESTASDNGSSARRQCPVCKATLSPDTLVPLYGRGGSSKKSLDGM 121
Query: 527 SDVPRRPTTR---------------MPYDHAPFSYPMHQQQPQFHQDNXXXXXXXXXXXX 393
+ +PRRP Y + P HQ Q H
Sbjct: 122 A-IPRRPMVHREAVEQQNARSHVNDQHYHQSTGDSPQHQPLMQAHHHPVPPGFDFIYPPA 180
Query: 392 XSDD-------------------PPFVSGIHGESLHHEQSYYLTLNGKSTRL-RQLMHLE 273
P + G SLH+ Y++ + RL RQ M +E
Sbjct: 181 PVGRGLIHSTAGGVLGGMAEVVLPWVLRGQLPASLHYTSPYHVAAQNVNPRLRRQQMEIE 240
Query: 272 CLLHQIW 252
LHQIW
Sbjct: 241 RSLHQIW 247
>ref|NP_001152715.1| ring domain containing protein [Zea mays]
gi|195659279|gb|ACG49107.1| ring domain containing
protein [Zea mays]
Length = 256
Score = 115 bits (288), Expect = 2e-23
Identities = 79/227 (34%), Positives = 99/227 (43%), Gaps = 44/227 (19%)
Frame = -3
Query: 800 EPPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQ--LESI- 630
EP +S G A + CFDCNIC D A EPVVTLCGHLYCWPC+Y+W++ +ES
Sbjct: 19 EPVKKAS--GDMPAAPTGSGCFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTA 76
Query: 629 ------SHKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGDSDVPRRPTTR---------- 498
+ +QCPVCKA LS DTLVPLYG G + + G + +PRRP
Sbjct: 77 SDNGSSARRQCPVCKATLSPDTLVPLYGRGGSSKKSLDGMA-IPRRPMVHREAVEQQNAR 135
Query: 497 -----MPYDHAPFSYPMHQQQPQFHQDNXXXXXXXXXXXXXSDD---------------- 381
Y + P HQ Q H
Sbjct: 136 SHVNDQHYHQSTGDSPQHQPLMQAHHHPVPPGFDFIYPPAPVGRGLIHSTAGGVLGGMAE 195
Query: 380 ---PPFVSGIHGESLHHEQSYYLTLNGKSTRL-RQLMHLECLLHQIW 252
P + G SLH+ Y++ + RL RQ M +E LHQIW
Sbjct: 196 VVLPWVLRGQLPASLHYTSPYHVAAQNVNPRLRRQQMEIERSLHQIW 242
>ref|XP_006652556.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X2
[Oryza brachyantha]
Length = 253
Score = 114 bits (285), Expect = 5e-23
Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Frame = -3
Query: 761 PARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQ---------LESISHKQCPV 609
P + +ACFDCNIC D A EPVVTLCGHLYCWPC+Y+W++ S S +QCPV
Sbjct: 29 PVTAGNACFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASNNRSSSRRQCPV 88
Query: 608 CKARLSQDTLVPLYGCGRLQQTAAKGDSDVPRRPTTR 498
CKA LS D LVPLYG G + + G + +PRRPT +
Sbjct: 89 CKATLSPDMLVPLYGRGGSLKKSLNGVA-IPRRPTVK 124
>ref|XP_006652555.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
[Oryza brachyantha]
Length = 270
Score = 114 bits (285), Expect = 5e-23
Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Frame = -3
Query: 761 PARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQ---------LESISHKQCPV 609
P + +ACFDCNIC D A EPVVTLCGHLYCWPC+Y+W++ S S +QCPV
Sbjct: 46 PVTAGNACFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASNNRSSSRRQCPV 105
Query: 608 CKARLSQDTLVPLYGCGRLQQTAAKGDSDVPRRPTTR 498
CKA LS D LVPLYG G + + G + +PRRPT +
Sbjct: 106 CKATLSPDMLVPLYGRGGSLKKSLNGVA-IPRRPTVK 141
>ref|XP_004506547.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
[Cicer arietinum] gi|502146654|ref|XP_004506548.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
isoform X2 [Cicer arietinum]
Length = 240
Score = 114 bits (285), Expect = 5e-23
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 13/143 (9%)
Frame = -3
Query: 818 DKPSMKE-PPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQ 642
D+PS+K PS G+T+ R+ FDCNIC DC +PVVT CGHLYCWPC+Y+W+
Sbjct: 15 DQPSLKNWKPSKD---GMTDSDRNASGGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLH 71
Query: 641 L--------ESISHKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGDSD----VPRRPTTR 498
L E QCPVCK+ LSQ +LVPLYG G+ + T+ + + VP+RP+
Sbjct: 72 LKTSVYSEYEEQQKPQCPVCKSELSQSSLVPLYGRGQTKTTSEEKVNQVGIVVPQRPSGP 131
Query: 497 MPYDHAPFSYPMHQQQPQFHQDN 429
Y+ S +Q Q N
Sbjct: 132 RSYNATTVSQSSYQSYRHPQQFN 154
>ref|NP_001053390.1| Os04g0530500 [Oryza sativa Japonica Group]
gi|38346627|emb|CAE02141.2| OSJNBa0074L08.21 [Oryza
sativa Japonica Group] gi|38346758|emb|CAE03863.2|
OSJNBa0081C01.9 [Oryza sativa Japonica Group]
gi|90399374|emb|CAH68386.1| B1011H02.2 [Oryza sativa
Indica Group] gi|113564961|dbj|BAF15304.1| Os04g0530500
[Oryza sativa Japonica Group]
gi|116312030|emb|CAJ86386.1| OSIGBa0155K17.13 [Oryza
sativa Indica Group] gi|125549120|gb|EAY94942.1|
hypothetical protein OsI_16747 [Oryza sativa Indica
Group] gi|125591077|gb|EAZ31427.1| hypothetical protein
OsJ_15560 [Oryza sativa Japonica Group]
gi|215697920|dbj|BAG92115.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737491|dbj|BAG96621.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 253
Score = 113 bits (283), Expect = 9e-23
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
Frame = -3
Query: 761 PARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWM---------QLESISHKQCPV 609
P + +ACFDCNIC D A EPVVTLCGHLYCWPC+Y+W+ S++ +QCPV
Sbjct: 29 PVTAGNACFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLCPGVGSTASNNSSLARRQCPV 88
Query: 608 CKARLSQDTLVPLYGCGRLQQTAAKGDSDVPRRPTTR 498
CKA LS D LVPLYG G + + G +PRRPT +
Sbjct: 89 CKATLSPDMLVPLYGRGGSLKKSLNG-VPIPRRPTVQ 124
>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
[Glycine max] gi|571500152|ref|XP_006594593.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
isoform X2 [Glycine max]
Length = 232
Score = 112 bits (281), Expect = 2e-22
Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 9/98 (9%)
Frame = -3
Query: 770 VTEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS-----HKQCPVC 606
VTE A + + CFDCNIC D A EPVVTLCGHLYCWPC+Y+W+ ++S S H QCPVC
Sbjct: 18 VTE-AENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLPPDEHPQCPVC 76
Query: 605 KARLSQDTLVPLYGCGRLQQTA----AKGDSDVPRRPT 504
KA +S T+VPLYG G TA A D +P RP+
Sbjct: 77 KADISNSTMVPLYGRGHAATTAEGKTASCDVFIPPRPS 114
>ref|XP_006358981.1| PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Solanum
tuberosum]
Length = 250
Score = 112 bits (280), Expect = 2e-22
Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Frame = -3
Query: 767 TEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLE-----SISHKQCPVCK 603
T + + +CFDCNIC D A +PVVTLCGHLYCWPC+Y+W+Q+E S+ + +CPVCK
Sbjct: 24 TAASENDTSCFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLQVESSGPGSVENSKCPVCK 83
Query: 602 ARLSQDTLVPLYGCG----RLQQTAAKGDSDVPRRP 507
A +S +LVPLYG G + A+ D D+P RP
Sbjct: 84 AHISNSSLVPLYGRGISSLESEPKKAQADVDIPHRP 119
>ref|XP_004976324.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Setaria
italica]
Length = 405
Score = 112 bits (280), Expect = 2e-22
Identities = 73/213 (34%), Positives = 93/213 (43%), Gaps = 43/213 (20%)
Frame = -3
Query: 761 PARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQ---------LESISHKQCPV 609
P CFDCNIC D A EPVVTLCGHLYCWPC+Y+W++ S + +QCPV
Sbjct: 180 PTTMGSGCFDCNICLDFAAEPVVTLCGHLYCWPCIYEWLRPGVESTASDNSSSARRQCPV 239
Query: 608 CKARLSQDTLVPLYGCGRLQQTAAKGDSDVPRRPTT-RMPYDHAPFSYPMHQQQPQ---- 444
CKA LS DTLVPLYG G + + G + +PRRP R +H + QQ
Sbjct: 240 CKATLSPDTLVPLYGRGGSSKKSLNGVA-IPRRPMVHRETVEHQNAQSNVDDQQHHQSME 298
Query: 443 ---FHQDNXXXXXXXXXXXXXSDDPPFVSG---IHG-----------------------E 351
HQ PP G IH
Sbjct: 299 ANPLHQPLQHAHYRPNPAGFDFIYPPAPLGRGLIHSTAGGVLGGMAEAVLPLVLRGQLPA 358
Query: 350 SLHHEQSYYLTLNGKSTRLRQLMHLECLLHQIW 252
SL++ Y++ + R R+ + +E LHQIW
Sbjct: 359 SLYYTSPYHVAAQNVNPRQRRHLEIERSLHQIW 391
>ref|NP_192260.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis thaliana]
gi|42572819|ref|NP_974506.1| E3 ubiquitin-protein ligase
RMA1 [Arabidopsis thaliana]
gi|75318457|sp|O64425.1|RMA1_ARATH RecName: Full=E3
ubiquitin-protein ligase RMA1; AltName: Full=Protein
RING membrane-anchor 1 gi|3164222|dbj|BAA28598.1| RMA1
[Arabidopsis thaliana] gi|4206205|gb|AAD11593.1| RMA1
RING zinc finger protein [Arabidopsis thaliana]
gi|7270674|emb|CAB77836.1| RMA1 RING zinc finger protein
[Arabidopsis thaliana] gi|28392896|gb|AAO41884.1|
putative E3 ubiquitin ligase, RMA1 [Arabidopsis
thaliana] gi|28827754|gb|AAO50721.1| putative E3
ubiquitin ligase, RMA1 [Arabidopsis thaliana]
gi|332656931|gb|AEE82331.1| E3 ubiquitin-protein ligase
RMA1 [Arabidopsis thaliana] gi|332656932|gb|AEE82332.1|
E3 ubiquitin-protein ligase RMA1 [Arabidopsis thaliana]
Length = 249
Score = 111 bits (278), Expect = 4e-22
Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 10/102 (9%)
Frame = -3
Query: 746 DACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS-------HKQCPVCKARLSQ 588
D+ FDCNIC D EPVVTLCGHL+CWPC+++W+ ++S S H+QCPVCK+++S
Sbjct: 43 DSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSH 102
Query: 587 DTLVPLYGCGRLQQTAAKGDSDVPRR---PTTRMPYDHAPFS 471
TLVPLYG GR T +G + VP+R P R+ ++P++
Sbjct: 103 STLVPLYGRGRC-TTQEEGKNSVPKRPVGPVYRLEMPNSPYA 143
>ref|XP_006350052.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Solanum
tuberosum]
Length = 235
Score = 111 bits (278), Expect = 4e-22
Identities = 65/179 (36%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Frame = -3
Query: 737 FDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESISHK-------QCPVCKARLSQDTL 579
F+CNIC D +PVVTLCGHLYCWPC+Y+W+ +++IS + +CPVCKA +SQ TL
Sbjct: 42 FECNICLDVVHDPVVTLCGHLYCWPCIYKWIHIKTISSENIDNQQPKCPVCKAEVSQKTL 101
Query: 578 VPLYGCGRLQQTAAKG---DSDVPRRPTTRMPYDHAPF---SYPMHQQQPQFHQDNXXXX 417
+PLYG G+ +TA K +P+RP T H + P QQ H N
Sbjct: 102 IPLYGRGQATKTAGKALNLGIVIPQRPPTPRCRSHGVIPNNNMPPLYQQSHDHHRNYTNT 161
Query: 416 XXXXXXXXXSDDPPFVSGIHGESLH-----HEQSYYLTLNGKSTRLRQLMHLECLLHQI 255
+ F + + G SL+ + SY L + RQL H + L++I
Sbjct: 162 EHMLSPGGTTTGEIFYARMFGNSLNTNLYTYSSSYNLAGSNSPRLRRQLSHADQSLNRI 220
>ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2
[Cucumis sativus] gi|449479350|ref|XP_004155576.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
isoform 2 [Cucumis sativus]
Length = 238
Score = 111 bits (278), Expect = 4e-22
Identities = 71/203 (34%), Positives = 101/203 (49%), Gaps = 39/203 (19%)
Frame = -3
Query: 740 CFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS-----HKQCPVCKARLSQDTLV 576
CFDCNIC D A EPVVTLCGHLYCWPC+Y+W+ ++S S H QCPVCKA +S T+V
Sbjct: 25 CFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMV 84
Query: 575 PLYGCGRL------QQTAAKGDSDVPRRPTT--------------RMPYDHAPFSYPMHQ 456
PLYG G+ + A D ++P RP+ ++PY + P+ P H
Sbjct: 85 PLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILATPSTHQQQLPYRN-PYQRPNHD 143
Query: 455 QQ--PQFHQDNXXXXXXXXXXXXXSDDPPFVSGIHGESLH------------HEQSYYLT 318
+ +D+ S P V G+ G+ +H + SY LT
Sbjct: 144 PLLFANYEEDSASPLLNLARTSFSSFHHPVV-GMIGDFVHARVFGNSDNLYSYRNSYQLT 202
Query: 317 LNGKSTRLRQLMHLECLLHQIWI 249
+ ++ RQ M ++ L++I I
Sbjct: 203 GSSRNRLRRQEMQVDKSLNRISI 225
>ref|XP_004134706.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1
[Cucumis sativus] gi|449479346|ref|XP_004155575.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
isoform 1 [Cucumis sativus]
Length = 257
Score = 111 bits (278), Expect = 4e-22
Identities = 71/203 (34%), Positives = 101/203 (49%), Gaps = 39/203 (19%)
Frame = -3
Query: 740 CFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS-----HKQCPVCKARLSQDTLV 576
CFDCNIC D A EPVVTLCGHLYCWPC+Y+W+ ++S S H QCPVCKA +S T+V
Sbjct: 44 CFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMV 103
Query: 575 PLYGCGRL------QQTAAKGDSDVPRRPTT--------------RMPYDHAPFSYPMHQ 456
PLYG G+ + A D ++P RP+ ++PY + P+ P H
Sbjct: 104 PLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQILATPSTHQQQLPYRN-PYQRPNHD 162
Query: 455 QQ--PQFHQDNXXXXXXXXXXXXXSDDPPFVSGIHGESLH------------HEQSYYLT 318
+ +D+ S P V G+ G+ +H + SY LT
Sbjct: 163 PLLFANYEEDSASPLLNLARTSFSSFHHPVV-GMIGDFVHARVFGNSDNLYSYRNSYQLT 221
Query: 317 LNGKSTRLRQLMHLECLLHQIWI 249
+ ++ RQ M ++ L++I I
Sbjct: 222 GSSRNRLRRQEMQVDKSLNRISI 244
>ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|223541719|gb|EEF43267.1| rnf5,
putative [Ricinus communis]
Length = 241
Score = 111 bits (278), Expect = 4e-22
Identities = 57/119 (47%), Positives = 73/119 (61%), Gaps = 12/119 (10%)
Frame = -3
Query: 758 ARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS-----HKQCPVCKARL 594
+ S CFDCNICFD A EPVVTLCGHLYCWPC+Y+W+ ++S S H QCPVCKA +
Sbjct: 21 SESFSGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASIASDEHPQCPVCKADI 80
Query: 593 SQDTLVPLYGCGR------LQQTAAKGDSDVPRRPTTRMPYDHAPFSYPMH-QQQPQFH 438
S T+VPLYG G+ ++ A+ + +P RP+ A S P H QQ +H
Sbjct: 81 SHTTMVPLYGRGQAPAEAEIEGKASCRGTAIPPRPSACGA--QALISSPQHTAQQLPYH 137
>ref|XP_006376502.1| zinc finger family protein [Populus trichocarpa]
gi|550325778|gb|ERP54299.1| zinc finger family protein
[Populus trichocarpa]
Length = 263
Score = 111 bits (277), Expect = 5e-22
Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 16/143 (11%)
Frame = -3
Query: 818 DKPSMKEPPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQL 639
DKPS+ S S T+ ++ +RS + FDCNIC D +PVVTLCGHLYCWPC+Y+W+
Sbjct: 20 DKPSLPNWKSVSETVIDSDDSRS--SGFDCNICLDSVHDPVVTLCGHLYCWPCIYKWLHF 77
Query: 638 ESIS--------HKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGDSD-----VPRRPTTR 498
+SIS +QCPVCKA +SQ T+VPL+G G+ + KG + +PRRP R
Sbjct: 78 QSISAENQDQHPQQQCPVCKAEVSQSTIVPLFGRGQTTK-PCKGKAPNLGIIIPRRPPGR 136
Query: 497 ---MPYDHAPFSYPMHQQQPQFH 438
+P + + PQ H
Sbjct: 137 ACGFDSPRSPIATSSPRVTPQIH 159
>ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform X1
[Glycine max] gi|571467016|ref|XP_006583817.1|
PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like
isoform X2 [Glycine max]
Length = 248
Score = 111 bits (277), Expect = 5e-22
Identities = 77/213 (36%), Positives = 97/213 (45%), Gaps = 43/213 (20%)
Frame = -3
Query: 797 PPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS--- 627
P + S + VTE ++D CFDCNIC D A EPVVTLCGHLYCWPC+Y+W+ ++S S
Sbjct: 15 PSPSPSPMTVTE---NLDGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAP 71
Query: 626 --HKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGDSD----------VPRRP-------- 507
H QCPVCK + T+VPLYG G Q A D D +P RP
Sbjct: 72 DEHPQCPVCKDDICHTTMVPLYGRG---QGIAHSDRDGKASSYRGSFIPPRPPALGAQSL 128
Query: 506 --TTRMPYDHAPFSYPMHQQ--QPQFHQDNXXXXXXXXXXXXXSDDPPF---VSGIHGES 348
T+ P+ P Q P +QD P F V G+ GE
Sbjct: 129 MSTSSQSAQQLPYRNPYQNQHFNPPLYQDEDESSSQMLNPGANMVAPGFPHLVVGMFGEM 188
Query: 347 LH------------HEQSYYL-TLNGKSTRLRQ 288
L+ + SY+L N S RLR+
Sbjct: 189 LYARVFGNSENLYNYPNSYHLGGSNNNSPRLRR 221
>ref|XP_002330679.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 111 bits (277), Expect = 5e-22
Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 16/143 (11%)
Frame = -3
Query: 818 DKPSMKEPPSNSSTLGVTEPARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQL 639
DKPS+ S S T+ ++ +RS + FDCNIC D +PVVTLCGHLYCWPC+Y+W+
Sbjct: 20 DKPSLPNWKSVSETVIDSDDSRS--SGFDCNICLDSVHDPVVTLCGHLYCWPCIYKWLHF 77
Query: 638 ESIS--------HKQCPVCKARLSQDTLVPLYGCGRLQQTAAKGDSD-----VPRRPTTR 498
+SIS +QCPVCKA +SQ T+VPL+G G+ + KG + +PRRP R
Sbjct: 78 QSISAENQDQHPQQQCPVCKAEVSQSTIVPLFGRGQTTK-PCKGKAPNLGIIIPRRPPGR 136
Query: 497 ---MPYDHAPFSYPMHQQQPQFH 438
+P + + PQ H
Sbjct: 137 ACGFDSPRSPIATSSPRVTPQIH 159
>ref|XP_002305139.1| putative RING family protein [Populus trichocarpa]
gi|222848103|gb|EEE85650.1| putative RING family protein
[Populus trichocarpa]
Length = 233
Score = 111 bits (277), Expect = 5e-22
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 10/95 (10%)
Frame = -3
Query: 758 ARSVDACFDCNICFDCAVEPVVTLCGHLYCWPCVYQWMQLESIS-----HKQCPVCKARL 594
+ S CFDCNICFD A EPVVTLCGHLYCWPC+Y+W+ ++S S H QCPVCKA +
Sbjct: 21 SESFSGCFDCNICFDFANEPVVTLCGHLYCWPCIYKWLHVQSASLASDEHPQCPVCKADI 80
Query: 593 SQDTLVPLYGCGRLQQTAAKGDSD-----VPRRPT 504
S T+VPLYG G+ T A+G + +P RP+
Sbjct: 81 SHATMVPLYGRGQ-GSTEAEGKAPYRGMIIPPRPS 114