BLASTX nr result
ID: Zingiber24_contig00027141
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027141
(239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 87 3e-15
ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 86 5e-15
ref|XP_004953845.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 86 7e-15
dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare] 86 7e-15
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 85 1e-14
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 84 1e-14
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 84 1e-14
ref|XP_006649025.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 84 2e-14
ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 84 2e-14
gb|ESW25240.1| hypothetical protein PHAVU_003G019100g [Phaseolus... 84 2e-14
gb|ESW25239.1| hypothetical protein PHAVU_003G019100g [Phaseolus... 84 2e-14
dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japo... 84 2e-14
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 84 2e-14
gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indi... 84 2e-14
dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica G... 84 2e-14
ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group] g... 84 2e-14
gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus pe... 84 3e-14
gb|AFK39085.1| unknown [Lotus japonicus] 83 3e-14
ref|XP_006584880.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 83 4e-14
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 83 4e-14
>ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 86.7 bits (213), Expect = 3e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDGVEL +PCNHHFHS+CITKWLR+HATCPLCK+NILKG++
Sbjct: 324 EDGVELSALPCNHHFHSTCITKWLRMHATCPLCKFNILKGSE 365
>ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cicer arietinum]
Length = 349
Score = 85.9 bits (211), Expect = 5e-15
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL T+PCNHHFHSSCI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 306 EDGTELHTLPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 349
>ref|XP_004953845.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Setaria italica]
Length = 368
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDG EL +PCNHHFH +CITKWLR+HATCPLCKYNILKG+D
Sbjct: 325 EDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSD 366
>dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDGVEL +PCNHHFHS CITKWLR+HA CPLCKYNILKG++
Sbjct: 325 EDGVELSALPCNHHFHSMCITKWLRMHANCPLCKYNILKGSE 366
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 84.7 bits (208), Expect = 1e-14
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL T+PCNHHFHS+CI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 920 EDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 963
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 84.3 bits (207), Expect = 1e-14
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHS+CI KWL+++ATCPLCKYNILKGND V
Sbjct: 905 EDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNDQV 948
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 84.3 bits (207), Expect = 1e-14
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHS+CI KWL+++ATCPLCKYNILKGND V
Sbjct: 1000 EDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNDQV 1043
>ref|XP_006649025.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Oryza
brachyantha]
Length = 409
Score = 84.0 bits (206), Expect = 2e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDG EL +PCNHHFH +CITKWLR+HATCPLCKYNILKG++
Sbjct: 366 EDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSE 407
>ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1
[Glycine max] gi|571466652|ref|XP_006583717.1|
PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform
X2 [Glycine max]
Length = 356
Score = 84.0 bits (206), Expect = 2e-14
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHSSCI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 313 EDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 356
>gb|ESW25240.1| hypothetical protein PHAVU_003G019100g [Phaseolus vulgaris]
Length = 342
Score = 84.0 bits (206), Expect = 2e-14
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHSSCI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 299 EDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 342
>gb|ESW25239.1| hypothetical protein PHAVU_003G019100g [Phaseolus vulgaris]
Length = 271
Score = 84.0 bits (206), Expect = 2e-14
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHSSCI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 228 EDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 271
>dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 84.0 bits (206), Expect = 2e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDG EL +PCNHHFH +CITKWLR+HATCPLCKYNILKG++
Sbjct: 137 EDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSE 178
>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 84.0 bits (206), Expect = 2e-14
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHSSCI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 314 EDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 357
>gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 84.0 bits (206), Expect = 2e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDG EL +PCNHHFH +CITKWLR+HATCPLCKYNILKG++
Sbjct: 279 EDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSE 320
>dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 84.0 bits (206), Expect = 2e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDG EL +PCNHHFH +CITKWLR+HATCPLCKYNILKG++
Sbjct: 89 EDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSE 130
>ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial
[Oryza sativa Japonica Group]
Length = 157
Score = 84.0 bits (206), Expect = 2e-14
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGND 127
EDG EL +PCNHHFH +CITKWLR+HATCPLCKYNILKG++
Sbjct: 114 EDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILKGSE 155
>gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus persica]
Length = 374
Score = 83.6 bits (205), Expect = 3e-14
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL T+PCNHHFH++CI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 331 EDGTELHTLPCNHHFHATCIVKWLKMNATCPLCKYNILKGNEPV 374
>gb|AFK39085.1| unknown [Lotus japonicus]
Length = 89
Score = 83.2 bits (204), Expect = 3e-14
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL ++PCNHHFHS+CI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 46 EDGAELHSLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 89
>ref|XP_006584880.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1
[Glycine max] gi|571469954|ref|XP_006584881.1|
PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform
X2 [Glycine max]
Length = 345
Score = 82.8 bits (203), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHS+CI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 302 EDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 345
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 82.8 bits (203), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 2 EDGVELLTMPCNHHFHSSCITKWLRIHATCPLCKYNILKGNDIV 133
EDG EL +PCNHHFHS+CI KWL+++ATCPLCKYNILKGN+ V
Sbjct: 976 EDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 1019