BLASTX nr result
ID: Zingiber24_contig00027016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00027016
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73092.1| hypothetical protein M569_01659, partial [Genlise... 107 1e-21
ref|XP_002303217.1| STICHEL family protein [Populus trichocarpa]... 105 6e-21
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|5... 100 2e-19
gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gam... 98 1e-18
ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis tha... 98 1e-18
ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arab... 96 5e-18
ref|XP_002519367.1| replication factor C / DNA polymerase III ga... 95 1e-17
ref|XP_006417008.1| hypothetical protein EUTSA_v10006609mg [Eutr... 92 7e-17
ref|XP_006306619.1| hypothetical protein CARUB_v10008136mg [Caps... 92 7e-17
gb|EPS63935.1| hypothetical protein M569_10847, partial [Genlise... 91 2e-16
gb|EXB36877.1| DNA polymerase III subunit [Morus notabilis] 75 1e-11
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212... 74 2e-11
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242... 73 4e-11
emb|CBI29623.3| unnamed protein product [Vitis vinifera] 73 4e-11
emb|CAN80767.1| hypothetical protein VITISV_013864 [Vitis vinifera] 73 4e-11
ref|XP_002458591.1| hypothetical protein SORBIDRAFT_03g036320 [S... 72 6e-11
ref|XP_006852261.1| hypothetical protein AMTR_s00049p00169350 [A... 72 1e-10
gb|EMS61249.1| DNA polymerase III subunit gamma/tau [Triticum ur... 72 1e-10
dbj|BAJ97476.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 1e-10
dbj|BAK02414.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 1e-10
>gb|EPS73092.1| hypothetical protein M569_01659, partial [Genlisea aurea]
Length = 1030
Score = 107 bits (268), Expect = 1e-21
Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG----ESQCLEXXXXXXXXXXXXD 170
E++RLK AL ++SDAE+ LR SSERSTWFTA LL+LG +S+C
Sbjct: 744 EVERLKHALGLLSDAEKHLRVSSERSTWFTATLLQLGSEGSQSECSRRRMSKVEDEDDHH 803
Query: 171 MVYNTRFCQGRRSLGDAIIDTRLANEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQL 350
N + + +L ++ + C +NS L W CID+CHS TL+QL
Sbjct: 804 TSLNWKKMSSKSTLVGDDVNAEVRPNFRC------SNSKMLSKIWFECIDKCHSRTLRQL 857
Query: 351 LYGNGRLISITDNEGTLIVLITFEDDKIKTRAE 449
L+ GRL+SI++ EG L+ I F D IKTRAE
Sbjct: 858 LHARGRLVSISEVEGGLVAHIAFGDRSIKTRAE 890
>ref|XP_002303217.1| STICHEL family protein [Populus trichocarpa]
gi|222840649|gb|EEE78196.1| STICHEL family protein
[Populus trichocarpa]
Length = 1241
Score = 105 bits (262), Expect = 6e-21
Identities = 68/189 (35%), Positives = 97/189 (51%), Gaps = 40/189 (21%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGESQCLEXXXXXXXXXXXX----- 167
EL+RLK AL+++S+AE+QLR SS+RSTWFTA LL+LG + ++
Sbjct: 783 ELERLKHALRLLSEAEKQLRISSDRSTWFTATLLQLGSTPSMDLTLSSSSRRQSSRTTEE 842
Query: 168 ----------------DMVYNTRFCQGRRSLGDAI-------------------IDTRLA 242
D Y R SL AI +D+
Sbjct: 843 DPSSVSKESNVYKPNSDAQYFPRRSSSPSSLYRAINGHSSHQGEYEFNAKPPRLMDSN-- 900
Query: 243 NEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFE 422
+E T K+ + NSD LD W +CI++CHS TL+QLL+ +G+L+SI++ +G L V + FE
Sbjct: 901 DEMTGNKVFRYKNSDKLDDIWEKCIEKCHSQTLRQLLHAHGKLLSISEVDGALAVYVAFE 960
Query: 423 DDKIKTRAE 449
D+ IK RAE
Sbjct: 961 DEDIKARAE 969
>ref|XP_002328811.1| predicted protein [Populus trichocarpa]
gi|566168353|ref|XP_006385102.1| STICHEL family protein
[Populus trichocarpa] gi|550341870|gb|ERP62899.1| STICHEL
family protein [Populus trichocarpa]
Length = 1197
Score = 100 bits (250), Expect = 2e-19
Identities = 68/196 (34%), Positives = 94/196 (47%), Gaps = 47/196 (23%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGES-------------QCLEXXXX 143
EL+RLK AL+++S+AE+QLR SS+RSTWFTA LL+LG + Q
Sbjct: 790 ELERLKHALRLLSEAEKQLRISSDRSTWFTATLLQLGSTPSMDLTQSSSSRRQSSRTTEE 849
Query: 144 XXXXXXXXDMVYNTRF---------------------C---QGRRSLGDAIIDTRLAN-- 245
VY T+ C QG +RL N
Sbjct: 850 DPSSASKESKVYKTKSNAQYLTQRSSSPPSLYREINGCSSQQGEFGFNAKAPRSRLVNSR 909
Query: 246 --------EATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTL 401
E T + + NS+ LD W +CI++CHS TL+QLL+ +G+L+SI++ +G L
Sbjct: 910 TSSTSLDDEITGNMIFRYKNSEKLDDIWEKCIEKCHSQTLRQLLHAHGKLLSISEVDGAL 969
Query: 402 IVLITFEDDKIKTRAE 449
V + FED IK RAE
Sbjct: 970 AVYVAFEDQDIKARAE 985
>gb|AAF43947.1|AC012188_24 Contains similarity to DNA Pol III Gamma and Tau from Chlamydia
trachomatis gb|AE001306.1 and contains an AAA (ATPase)
PF|00004 domain [Arabidopsis thaliana]
Length = 1071
Score = 97.8 bits (242), Expect = 1e-18
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 36/185 (19%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGE----------SQCLEXXXXXXX 152
+L+RLK ALK++S+AE+QLR S++RSTWF A LL+LG S +
Sbjct: 745 DLERLKHALKLLSEAEKQLRVSTDRSTWFIATLLQLGSMPSPGTTHTGSSRRQSSRATEE 804
Query: 153 XXXXXDMVY---------NTRFCQGRRSLGDAIIDTRLANEATCV-----KLCAH----- 275
+ Y NT R G+ + + +L++ ++ V + +H
Sbjct: 805 SISREVIAYKQRSGLQCSNTASPTSIRKSGNLVREVKLSSSSSEVLESDTSMASHDDTTA 864
Query: 276 -------ANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKI 434
NS+ L+ W +C+D+CHS TLKQLLY +G+L+SI++ EG L+ I F + +I
Sbjct: 865 STMTLTCRNSEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLSISEVEGILVAYIAFGEGEI 924
Query: 435 KTRAE 449
K RAE
Sbjct: 925 KARAE 929
>ref|NP_172898.2| AAA-type ATPase family protein [Arabidopsis thaliana]
gi|528050033|sp|F4HW65.1|STIL1_ARATH RecName:
Full=Protein STICHEL-like 1 gi|332191046|gb|AEE29167.1|
AAA-type ATPase family protein [Arabidopsis thaliana]
Length = 1116
Score = 97.8 bits (242), Expect = 1e-18
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 36/185 (19%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGE----------SQCLEXXXXXXX 152
+L+RLK ALK++S+AE+QLR S++RSTWF A LL+LG S +
Sbjct: 738 DLERLKHALKLLSEAEKQLRVSTDRSTWFIATLLQLGSMPSPGTTHTGSSRRQSSRATEE 797
Query: 153 XXXXXDMVY---------NTRFCQGRRSLGDAIIDTRLANEATCV-----KLCAH----- 275
+ Y NT R G+ + + +L++ ++ V + +H
Sbjct: 798 SISREVIAYKQRSGLQCSNTASPTSIRKSGNLVREVKLSSSSSEVLESDTSMASHDDTTA 857
Query: 276 -------ANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKI 434
NS+ L+ W +C+D+CHS TLKQLLY +G+L+SI++ EG L+ I F + +I
Sbjct: 858 STMTLTCRNSEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLSISEVEGILVAYIAFGEGEI 917
Query: 435 KTRAE 449
K RAE
Sbjct: 918 KARAE 922
>ref|XP_002892809.1| hypothetical protein ARALYDRAFT_888824 [Arabidopsis lyrata subsp.
lyrata] gi|297338651|gb|EFH69068.1| hypothetical protein
ARALYDRAFT_888824 [Arabidopsis lyrata subsp. lyrata]
Length = 1130
Score = 95.9 bits (237), Expect = 5e-18
Identities = 63/185 (34%), Positives = 96/185 (51%), Gaps = 36/185 (19%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGE----------SQCLEXXXXXXX 152
+L+RLK ALK++S+AE+QLR S++RSTWF A LL+LG S +
Sbjct: 752 DLERLKHALKLLSEAEKQLRVSTDRSTWFIATLLQLGSVPSPGTTHTGSSRRQSSRATDE 811
Query: 153 XXXXXDMVYNTRF---CQGR------RSLGDAIIDTRLANEATCV-----KLCAH----- 275
+ Y R C R G+ + + +L++ + V + +H
Sbjct: 812 SISREVIAYKQRSGLQCSNSASPTSMRKSGNLVHEVKLSSSSREVLESETSIASHDDTTT 871
Query: 276 -------ANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKI 434
NS+ L+ W +C+D+CHS TLKQLLY +G+L+SI++ EG L+ I F + +I
Sbjct: 872 SSMTLTCRNSEKLNDIWIKCVDRCHSKTLKQLLYAHGKLLSISEVEGILVAYIAFGEREI 931
Query: 435 KTRAE 449
K RAE
Sbjct: 932 KARAE 936
>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223541434|gb|EEF42984.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 1270
Score = 94.7 bits (234), Expect = 1e-17
Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 47/196 (23%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALL---------------------RLGES 119
EL+RLK ALK++S+AE+QLR SS+RSTWFTA LL R E
Sbjct: 768 ELERLKHALKLLSEAEKQLRVSSDRSTWFTATLLQLGSVPSPDLTQSSSSRRQSSRTTEE 827
Query: 120 QCLEXXXXXXXXXXXXDMVYNTRFCQGRRSLGDAI---------------------IDTR 236
D Y +R SL AI ID+
Sbjct: 828 DPSSASREVTVYKQKSDAQYLSRRSSSPASLYKAINGKSSHRGEFGFNSKLRPSHSIDSC 887
Query: 237 LANEATCVKLCA-----HANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTL 401
+++ + +L + N++ LD W +CI CHSNTL+QLL+ +G+L S+++ EG L
Sbjct: 888 MSSASRDDELVESMPLRYRNAEKLDRIWEKCIANCHSNTLRQLLHTHGKLFSLSEVEGAL 947
Query: 402 IVLITFEDDKIKTRAE 449
+V + F D+ IK RAE
Sbjct: 948 VVYVAFGDEDIKARAE 963
>ref|XP_006417008.1| hypothetical protein EUTSA_v10006609mg [Eutrema salsugineum]
gi|557094779|gb|ESQ35361.1| hypothetical protein
EUTSA_v10006609mg [Eutrema salsugineum]
Length = 1166
Score = 92.0 bits (227), Expect = 7e-17
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 34/183 (18%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG-------------ESQCLEXXXX 143
+++RLK ALKI+S+AE+QLR +++RSTWF A LL+LG Q
Sbjct: 773 DMERLKHALKILSEAEKQLRVTTDRSTWFIATLLQLGLMPSPGTTHTGSSRRQSSRATEE 832
Query: 144 XXXXXXXXDMVYNTRF---CQGR------RSLGDAIIDTRLANEATCVKLCAHA------ 278
+ Y R C R G+ + + +L + ++ + +
Sbjct: 833 NLSSISREVIAYKQRSGLQCSNSSSPTFLRKGGNTVHEMKLNSSSSDGSISSDGDTTAST 892
Query: 279 ------NSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKIKT 440
NS+ L+ W +CID+CHS TLKQLLY +G+L+SI++ EG L+ I F + +IK
Sbjct: 893 MTLTCRNSEKLNDIWIKCIDKCHSKTLKQLLYTHGKLLSISEVEGILVAYIAFGEREIKL 952
Query: 441 RAE 449
RAE
Sbjct: 953 RAE 955
>ref|XP_006306619.1| hypothetical protein CARUB_v10008136mg [Capsella rubella]
gi|482575330|gb|EOA39517.1| hypothetical protein
CARUB_v10008136mg [Capsella rubella]
Length = 1146
Score = 92.0 bits (227), Expect = 7e-17
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 37/186 (19%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGE----------------SQCLEX 134
+++RLK ALK++S+AE QLR S++RSTWF A LL+LG S+ E
Sbjct: 766 DMERLKHALKLLSEAENQLRVSTDRSTWFIATLLQLGSMPSPGTTHTGSSRRLSSRATED 825
Query: 135 XXXXXXXXXXXDMVYNTRFCQGR------RSLGDAIIDTRLANEATCVKLCAHANSDD-- 290
+ C+ R G+ + + +L++ ++ V A+ DD
Sbjct: 826 HPPSISREVIAYKPRSGLQCKNSASPTSMRKSGNLVYEVKLSSSSSEVLESDTASHDDTT 885
Query: 291 -------------LDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDK 431
L+ W +C+D+CHS TLKQLL+ +G+L+SI++ EG L+ I F + +
Sbjct: 886 ASTMTLTCRNAEKLNDIWIKCVDRCHSKTLKQLLFAHGKLLSISEVEGILVAYIAFGERE 945
Query: 432 IKTRAE 449
IK RAE
Sbjct: 946 IKARAE 951
>gb|EPS63935.1| hypothetical protein M569_10847, partial [Genlisea aurea]
Length = 475
Score = 90.9 bits (224), Expect = 2e-16
Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLGESQCLEXXXXXXXXXXXXDMVYN 182
EL+RL AL ++SD+E+ +R SSERSTWFTA LL+LG CL +
Sbjct: 315 ELNRLNLALSLLSDSEKHIRISSERSTWFTATLLQLG---CLPG---------------S 356
Query: 183 TRFCQGRRSLGDAIIDTRLANEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGN 362
+ RR L + + ++ + C+ + ++S+ L+ W +CI++C S TL++LL +
Sbjct: 357 SSSASSRRKLTSSTGKDK-SSRSECMN-SSSSSSELLNRIWEQCIEKCRSKTLRRLLLEH 414
Query: 363 GRLISITDNEGTLIVL-ITFEDDKIKTRAE 449
GRL SI+D +G L+V I F D +KTRAE
Sbjct: 415 GRLASISDVQGGLLVAHIAFRDRNLKTRAE 444
>gb|EXB36877.1| DNA polymerase III subunit [Morus notabilis]
Length = 1169
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +3
Query: 279 NSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKIKTRAE 449
NS+ LD W RCI++CHS TL+QLL+ +GRL+SI++ EG LI + F D+ IK+RAE
Sbjct: 905 NSEKLDSLWARCIERCHSKTLRQLLHAHGRLVSISEVEGVLIAYVAFADENIKSRAE 961
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
EL+RLK ALK++S+AE++LR SSERSTWFTA LL+LG
Sbjct: 764 ELERLKHALKLLSEAEKRLRVSSERSTWFTATLLQLG 800
>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
gi|449478091|ref|XP_004155220.1| PREDICTED:
uncharacterized protein LOC101227259 [Cucumis sativus]
Length = 1267
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/57 (56%), Positives = 45/57 (78%)
Frame = +3
Query: 279 NSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKIKTRAE 449
NS+ L+ W CI++CHS TL+QLLY +G+L+SI+++EGTLI + FED IK+RAE
Sbjct: 938 NSEKLNSIWVHCIERCHSKTLRQLLYAHGKLLSISESEGTLIAYVAFEDVDIKSRAE 994
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
E++RLK ALK +S+AE+QLR SSERSTWFTA LL+LG
Sbjct: 792 EVERLKHALKFLSEAEKQLRVSSERSTWFTATLLQLG 828
>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
Length = 1274
Score = 72.8 bits (177), Expect = 4e-11
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = +3
Query: 279 NSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKIKTRAE 449
N+D LD W RCI++CHS TL+QLL+ +G+L+SI++ EG L+ + F+D+ IK RAE
Sbjct: 906 NADKLDDIWERCIERCHSKTLRQLLHAHGKLVSISEAEGGLVAYVAFQDEDIKCRAE 962
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
E+DRLK ALK++S+AE+QLR SSERSTWFTA LL+LG
Sbjct: 760 EMDRLKHALKLLSEAEKQLRVSSERSTWFTATLLQLG 796
>emb|CBI29623.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 72.8 bits (177), Expect = 4e-11
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = +3
Query: 279 NSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKIKTRAE 449
N+D LD W RCI++CHS TL+QLL+ +G+L+SI++ EG L+ + F+D+ IK RAE
Sbjct: 765 NADKLDDIWERCIERCHSKTLRQLLHAHGKLVSISEAEGGLVAYVAFQDEDIKCRAE 821
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
E+DRLK ALK++S+AE+QLR SSERSTWFTA LL+LG
Sbjct: 634 EMDRLKHALKLLSEAEKQLRVSSERSTWFTATLLQLG 670
>emb|CAN80767.1| hypothetical protein VITISV_013864 [Vitis vinifera]
Length = 545
Score = 72.8 bits (177), Expect = 4e-11
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = +3
Query: 279 NSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISITDNEGTLIVLITFEDDKIKTRAE 449
N+D LD W RCI++CHS TL+QLL+ +G+L+SI++ EG L+ + F+D+ IK RAE
Sbjct: 146 NADKLDDIWERCIERCHSKTLRQLLHAHGKLVSISEAEGGLVAYVAFQDEDIKCRAE 202
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/36 (75%), Positives = 33/36 (91%)
Frame = +3
Query: 6 LDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
+DRLK ALK++S+AE+QLR SSERSTWFTA LL+LG
Sbjct: 1 MDRLKHALKLLSEAEKQLRVSSERSTWFTATLLQLG 36
>ref|XP_002458591.1| hypothetical protein SORBIDRAFT_03g036320 [Sorghum bicolor]
gi|241930566|gb|EES03711.1| hypothetical protein
SORBIDRAFT_03g036320 [Sorghum bicolor]
Length = 1176
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +3
Query: 204 RSLGDAIIDTRLANEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISIT 383
RS+ A++++ ++ K SD+L WR+CI+ CHS TL+QLLY +G+L S+
Sbjct: 851 RSVDRALLESAQTGISSEQKAMNCGISDNLTRIWRKCIENCHSKTLRQLLYDHGKLASVK 910
Query: 384 DNEGTLIVLITFEDDKIKTRAE 449
+ EGT++ I FED+ IK RA+
Sbjct: 911 ECEGTIVAFIAFEDNDIKFRAQ 932
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/37 (78%), Positives = 36/37 (97%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
EL+RL+QAL+I+SDAE+Q+R SSERSTWFTAALL+LG
Sbjct: 730 ELERLQQALRILSDAEKQIRLSSERSTWFTAALLQLG 766
>ref|XP_006852261.1| hypothetical protein AMTR_s00049p00169350 [Amborella trichopoda]
gi|548855865|gb|ERN13728.1| hypothetical protein
AMTR_s00049p00169350 [Amborella trichopoda]
Length = 1110
Score = 71.6 bits (174), Expect = 1e-10
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG--ESQCLEXXXXXXXXXXXXDMV 176
EL +L+ ALKI+S+ ++QLR S ++ TW T ALL+ G ES + ++
Sbjct: 685 ELQKLRHALKILSETDKQLRSSRDQITWLTVALLQFGSSESSLVLDSSGPNAYQNFSNLR 744
Query: 177 YN----TRFCQGRRSLGDAIIDTRLANEATCVKLCAHAN-SDDLDMTWRRCIDQCHSNTL 341
N T + G+ L D R N + C L AH++ S LD+ WRR I QC S TL
Sbjct: 745 ENGPCSTSYANGK--LEHPKDDIRDDNASCC--LDAHSDTSGKLDLIWRRAISQCQSCTL 800
Query: 342 KQLLYGNGRLISITDNEGT 398
K+ L G+L+SI GT
Sbjct: 801 KEFLQKEGKLLSIHVKNGT 819
>gb|EMS61249.1| DNA polymerase III subunit gamma/tau [Triticum urartu]
Length = 1103
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +3
Query: 204 RSLGDAIIDTRLANEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISIT 383
RS+ ++D+ A+ +T K + +SD L WR+CID CHS TL+QLL +G+L SI
Sbjct: 836 RSVDRVLLDSAQASNSTEQKPIINGSSD-LVQIWRKCIDNCHSKTLQQLLSDHGKLTSIK 894
Query: 384 DNEGTLIVLITFEDDKIKTRAE 449
+ EG L+ I+FED KI +RA+
Sbjct: 895 EFEGYLVAFISFEDSKIMSRAQ 916
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/37 (81%), Positives = 36/37 (97%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
EL+RL+QALKI+SDAE+Q+R SSERSTWFTAALL+LG
Sbjct: 715 ELERLQQALKILSDAEKQIRLSSERSTWFTAALLQLG 751
>dbj|BAJ97476.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1174
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +3
Query: 204 RSLGDAIIDTRLANEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISIT 383
RS+ ++D+ A+ +T K + +SD L WR+CID CHS TL+QLL +G+L SI
Sbjct: 839 RSVDRVLLDSAQASNSTEQKPIINGSSD-LIQIWRKCIDNCHSKTLQQLLSDHGKLASIK 897
Query: 384 DNEGTLIVLITFEDDKIKTRAE 449
+ EG L+ I+FED KI +RA+
Sbjct: 898 EFEGYLVAFISFEDSKIMSRAQ 919
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/37 (81%), Positives = 36/37 (97%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
EL+RL+QALKI+SDAE+Q+R SSERSTWFTAALL+LG
Sbjct: 718 ELERLQQALKILSDAEKQIRLSSERSTWFTAALLQLG 754
>dbj|BAK02414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1174
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +3
Query: 204 RSLGDAIIDTRLANEATCVKLCAHANSDDLDMTWRRCIDQCHSNTLKQLLYGNGRLISIT 383
RS+ ++D+ A+ +T K + +SD L WR+CID CHS TL+QLL +G+L SI
Sbjct: 839 RSVDRVLLDSAQASNSTEQKPIINGSSD-LIQIWRKCIDNCHSKTLQQLLSDHGKLASIK 897
Query: 384 DNEGTLIVLITFEDDKIKTRAE 449
+ EG L+ I+FED KI +RA+
Sbjct: 898 EFEGYLVAFISFEDSKIMSRAQ 919
Score = 63.2 bits (152), Expect = 3e-08
Identities = 30/37 (81%), Positives = 36/37 (97%)
Frame = +3
Query: 3 ELDRLKQALKIVSDAERQLRCSSERSTWFTAALLRLG 113
EL+RL+QALKI+SDAE+Q+R SSERSTWFTAALL+LG
Sbjct: 718 ELERLQQALKILSDAEKQIRLSSERSTWFTAALLQLG 754