BLASTX nr result
ID: Zingiber24_contig00026879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026879
(726 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510714.1| protein with unknown function [Ricinus commu... 92 2e-16
ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citr... 91 3e-16
ref|XP_002301903.1| zinc finger family protein [Populus trichoca... 90 8e-16
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 90 8e-16
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera] 90 8e-16
ref|XP_002306993.2| hypothetical protein POPTR_0005s27660g [Popu... 89 1e-15
ref|XP_006302871.1| hypothetical protein CARUB_v10021002mg [Caps... 89 1e-15
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th... 89 1e-15
ref|NP_177767.1| RING-H2 finger protein ATL8 [Arabidopsis thalia... 89 1e-15
ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like ... 89 1e-15
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab... 89 1e-15
ref|XP_003612411.1| Ring finger protein [Medicago truncatula] gi... 89 2e-15
gb|EOX90617.1| Basic helix-loop-helix DNA-binding superfamily pr... 88 2e-15
ref|XP_004512286.1| PREDICTED: RING-H2 finger protein ATL8-like ... 88 2e-15
ref|XP_006390200.1| hypothetical protein EUTSA_v10019183mg [Eutr... 88 3e-15
ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like ... 88 3e-15
ref|XP_002890411.1| zinc finger family protein [Arabidopsis lyra... 88 3e-15
gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis] 87 4e-15
ref|XP_004509462.1| PREDICTED: RING-H2 finger protein ATL80-like... 87 4e-15
ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali... 87 4e-15
>ref|XP_002510714.1| protein with unknown function [Ricinus communis]
gi|223551415|gb|EEF52901.1| protein with unknown
function [Ricinus communis]
Length = 194
Score = 91.7 bits (226), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
DCAICLAEFA GD +RVLPQCGHGFH +C+DTWLGS++SCPSC RCQKC
Sbjct: 113 DCAICLAEFAPGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSC----RQILVVARCQKC 167
>ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citrus clementina]
gi|568839917|ref|XP_006473922.1| PREDICTED: RING-H2
finger protein ATL80-like [Citrus sinensis]
gi|557537540|gb|ESR48658.1| hypothetical protein
CICLE_v10004041mg [Citrus clementina]
Length = 198
Score = 91.3 bits (225), Expect = 3e-16
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKCX 498
DCAICL EF +GD +RVLPQCGHGFH AC+DTWLGS++SCPSC RCQKC
Sbjct: 105 DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC----RQILVVARCQKCG 160
Query: 497 XXXXXXXXXAKPTESGGASTSKTA 426
+ GGA+ + A
Sbjct: 161 GFPASSSSSSGAGVEGGAAETSEA 184
>ref|XP_002301903.1| zinc finger family protein [Populus trichocarpa]
gi|222843629|gb|EEE81176.1| zinc finger family protein
[Populus trichocarpa]
Length = 200
Score = 89.7 bits (221), Expect = 8e-16
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQ 507
+L DCAICL EF+ GD +RVLPQCGHGFH +C+DTWLGS++SCPSC RCQ
Sbjct: 103 KLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSC----RQILVVARCQ 158
Query: 506 KC 501
KC
Sbjct: 159 KC 160
>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
Length = 184
Score = 89.7 bits (221), Expect = 8e-16
Identities = 42/77 (54%), Positives = 45/77 (58%)
Frame = -2
Query: 683 LVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQK 504
L DCAICL EF GD +RVLPQCGHGFH C+DTWLGS+ SCPSC RCQK
Sbjct: 98 LTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSC----RQILVVARCQK 153
Query: 503 CXXXXXXXXXXAKPTES 453
C TES
Sbjct: 154 CGGVPASSSSTGAETES 170
>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
Length = 312
Score = 89.7 bits (221), Expect = 8e-16
Identities = 42/77 (54%), Positives = 45/77 (58%)
Frame = -2
Query: 683 LVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQK 504
L DCAICL EF GD +RVLPQCGHGFH C+DTWLGS+ SCPSC RCQK
Sbjct: 98 LTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSC----RQILVVARCQK 153
Query: 503 CXXXXXXXXXXAKPTES 453
C TES
Sbjct: 154 CGGVPASSSSTGAETES 170
>ref|XP_002306993.2| hypothetical protein POPTR_0005s27660g [Populus trichocarpa]
gi|550339878|gb|EEE93989.2| hypothetical protein
POPTR_0005s27660g [Populus trichocarpa]
Length = 194
Score = 89.4 bits (220), Expect = 1e-15
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
DCAICL EF+ GD +RVLPQCGHGFH AC+DTWLGS++SCPSC RCQKC
Sbjct: 106 DCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC----RQILMVDRCQKC 160
>ref|XP_006302871.1| hypothetical protein CARUB_v10021002mg [Capsella rubella]
gi|482571581|gb|EOA35769.1| hypothetical protein
CARUB_v10021002mg [Capsella rubella]
Length = 186
Score = 89.0 bits (219), Expect = 1e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
+LV+CAICL EFA GD +RVLPQCGHGFH +C+DTWLGS++SCPSC
Sbjct: 100 KLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 145
>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 186
Score = 89.0 bits (219), Expect = 1e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
+LV+CAICL EFA GD +RVLPQCGHGFH +C+DTWLGS++SCPSC
Sbjct: 100 KLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 145
>ref|NP_177767.1| RING-H2 finger protein ATL8 [Arabidopsis thaliana]
gi|68565205|sp|Q8LC69.2|ATL8_ARATH RecName: Full=RING-H2
finger protein ATL8 gi|6554478|gb|AAF16660.1|AC012394_9
putative RING zinc finger protein; 36546-35989
[Arabidopsis thaliana]
gi|12323975|gb|AAG51946.1|AC015450_7 putative RING zinc
finger protein; 5217-5774 [Arabidopsis thaliana]
gi|26452794|dbj|BAC43477.1| putative RING finger protein
[Arabidopsis thaliana] gi|28973309|gb|AAO63979.1|
putative RING zinc finger protein [Arabidopsis thaliana]
gi|332197717|gb|AEE35838.1| RING-H2 finger protein ATL8
[Arabidopsis thaliana]
Length = 185
Score = 89.0 bits (219), Expect = 1e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
+LV+CAICL EFA GD +RVLPQCGHGFH +C+DTWLGS++SCPSC
Sbjct: 100 KLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 145
>ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
Length = 226
Score = 89.0 bits (219), Expect = 1e-15
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
+CAICLAEFA GD +RVLPQCGHGFH C+DTWLGS++SCPSC RCQKC
Sbjct: 104 ECAICLAEFAAGDEIRVLPQCGHGFHVPCIDTWLGSHSSCPSC----RQVLAVARCQKC 158
>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
Length = 186
Score = 89.0 bits (219), Expect = 1e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
+LV+CAICL EFA GD +RVLPQCGHGFH +C+DTWLGS++SCPSC
Sbjct: 100 KLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 145
>ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
gi|355513746|gb|AES95369.1| Ring finger protein
[Medicago truncatula] gi|388496508|gb|AFK36320.1|
unknown [Medicago truncatula]
Length = 215
Score = 88.6 bits (218), Expect = 2e-15
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
+CAICL++FA GD +RVLPQCGHGFH AC+DTWLGS++SCPSC RCQKC
Sbjct: 104 ECAICLSDFAAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC----RQILAVTRCQKC 158
>gb|EOX90617.1| Basic helix-loop-helix DNA-binding superfamily protein isoform 1
[Theobroma cacao] gi|508698722|gb|EOX90618.1| Basic
helix-loop-helix-containing protein, putative isoform 1
[Theobroma cacao]
Length = 185
Score = 88.2 bits (217), Expect = 2e-15
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = -2
Query: 680 VDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
++CAICL EFA+GD +RVLPQCGHGFH CVDTWLGS++SCPSC
Sbjct: 99 MECAICLGEFAEGDEIRVLPQCGHGFHVGCVDTWLGSHSSCPSC 142
>ref|XP_004512286.1| PREDICTED: RING-H2 finger protein ATL8-like [Cicer arietinum]
Length = 217
Score = 88.2 bits (217), Expect = 2e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
+CAICL+EF GD +RVLPQCGHGFH AC+DTWLGS++SCPSC RCQKC
Sbjct: 104 ECAICLSEFTAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC----RQILAVTRCQKC 158
>ref|XP_006390200.1| hypothetical protein EUTSA_v10019183mg [Eutrema salsugineum]
gi|557086634|gb|ESQ27486.1| hypothetical protein
EUTSA_v10019183mg [Eutrema salsugineum]
Length = 190
Score = 87.8 bits (216), Expect = 3e-15
Identities = 38/62 (61%), Positives = 45/62 (72%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQ 507
+ +CAICL EFA GD +RVLPQCGHGFH +C+DTWLGS++SCPSC RCQ
Sbjct: 104 KFAECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC----RQILVVARCQ 159
Query: 506 KC 501
KC
Sbjct: 160 KC 161
>ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
Length = 223
Score = 87.8 bits (216), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
+CAICLA+FA GD +RVLPQCGHGFH C+DTWLGS++SCPSC RCQKC
Sbjct: 104 ECAICLADFAAGDEIRVLPQCGHGFHVPCIDTWLGSHSSCPSC----RQILAVTRCQKC 158
>ref|XP_002890411.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297336253|gb|EFH66670.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 87.8 bits (216), Expect = 3e-15
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
+ V+CAICLAEF+ GD +RVLPQCGHGFH +C+DTWLGS++SCPSC
Sbjct: 107 KFVECAICLAEFSAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC 152
>gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis]
Length = 186
Score = 87.4 bits (215), Expect = 4e-15
Identities = 39/59 (66%), Positives = 43/59 (72%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
DCAICLAEFA GD +R LPQCGH FH AC+DTWLGS++SCPSC RCQKC
Sbjct: 104 DCAICLAEFAIGDEIRELPQCGHAFHVACIDTWLGSHSSCPSC----RQILVVARCQKC 158
>ref|XP_004509462.1| PREDICTED: RING-H2 finger protein ATL80-like [Cicer arietinum]
Length = 205
Score = 87.4 bits (215), Expect = 4e-15
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -2
Query: 677 DCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSCXXXXXXXXXXXRCQKC 501
+CAICL+EF G+ VRVLPQCGHGFH ACVDTWLGS++SCPSC RCQKC
Sbjct: 100 ECAICLSEFTAGEEVRVLPQCGHGFHVACVDTWLGSHSSCPSC----RAPFAIARCQKC 154
>ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana]
gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName:
Full=RING-H2 finger protein ATL80
gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34
[Arabidopsis thaliana] gi|15027985|gb|AAK76523.1|
unknown protein [Arabidopsis thaliana]
gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80
[Arabidopsis thaliana]
Length = 197
Score = 87.4 bits (215), Expect = 4e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 686 ELVDCAICLAEFADGDRVRVLPQCGHGFHAACVDTWLGSNASCPSC 549
+ +CAICLAEF+ GD +RVLPQCGHGFH AC+DTWLGS++SCPSC
Sbjct: 107 KFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSC 152