BLASTX nr result
ID: Zingiber24_contig00026808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026808
(606 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826428.1| hypothetical protein AMTR_s00004p00164270 [A... 63 5e-08
gb|EAZ28843.1| hypothetical protein OsJ_12876 [Oryza sativa Japo... 57 4e-06
gb|EAY92113.1| hypothetical protein OsI_13819 [Oryza sativa Indi... 57 4e-06
gb|ABF99255.1| expressed protein [Oryza sativa Japonica Group] 57 4e-06
ref|NP_001051501.1| Os03g0788300 [Oryza sativa Japonica Group] g... 57 4e-06
emb|CBI24989.3| unnamed protein product [Vitis vinifera] 56 7e-06
>ref|XP_006826428.1| hypothetical protein AMTR_s00004p00164270 [Amborella trichopoda]
gi|548830742|gb|ERM93665.1| hypothetical protein
AMTR_s00004p00164270 [Amborella trichopoda]
Length = 1329
Score = 63.2 bits (152), Expect = 5e-08
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Frame = +2
Query: 5 YAG--TFSEKTPCNEQAGG-QVLKRSSSTLYSDFRSTCPIRRVRQKLGINSSNRIMHSVL 175
YAG T S T N +GG QVLKR SS + + F S IRR+RQK + ++ ++ +
Sbjct: 322 YAGPSTPSYWTTANGSSGGRQVLKRRSSVMENGFGSVGTIRRIRQKSNLMVLSKAPNASV 381
Query: 176 PGNSEPCSLTVKKGFQD-----PSQNQCPHNLDAREETEGNKILNKAVASGSVQSREMEN 340
P +S P L + D P + P + ++ + +GN + V Q+RE
Sbjct: 382 PASS-PLPLLLPGSDADQNSFVPPKLDVPESSTSKSQADGNG-EERGVVMVPQQTRETVK 439
Query: 341 KILQGLDKLLPSPKRKSMKLK 403
+I GLDK+ PSPK KS +L+
Sbjct: 440 RIFAGLDKMFPSPKDKSSELR 460
>gb|EAZ28843.1| hypothetical protein OsJ_12876 [Oryza sativa Japonica Group]
Length = 711
Score = 57.0 bits (136), Expect = 4e-06
Identities = 55/177 (31%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Frame = +2
Query: 20 SEKTPCNEQAGG--QVLKRSSSTLYSDFRSTCPIRRVRQKLGINSSNRIMHSVLPGNSEP 193
S +T N G QVLKR + L ++ S PIRR+RQK + S+ R S GN P
Sbjct: 416 SSQTRANSLVSGCRQVLKRRGAELENELGSIGPIRRIRQKSNMMSTFRDARSSPRGNFLP 475
Query: 194 CSLTVKKGFQD--------PSQN-------QCPHNLDAREETEGNKILNKAVASGSVQSR 328
S T+ D PS Q +AR E KI + V + S QS
Sbjct: 476 -SRTIGSDLTDGGSPIRDSPSSKRLLLGTGQSVEPAEARRNDEDGKISSDNVLAASPQSN 534
Query: 329 EMENKILQGLDKLLPSPKRK-----------SMKLKDNPVEESPSYGIHTHPKGTGD 466
+M KI + L+ ++PSPK K S + PV + P GT D
Sbjct: 535 KMAEKIFEQLNIIVPSPKEKLSLPQFAAGNASCSMSKQPVRQG------NEPNGTSD 585
>gb|EAY92113.1| hypothetical protein OsI_13819 [Oryza sativa Indica Group]
Length = 745
Score = 57.0 bits (136), Expect = 4e-06
Identities = 55/177 (31%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Frame = +2
Query: 20 SEKTPCNEQAGG--QVLKRSSSTLYSDFRSTCPIRRVRQKLGINSSNRIMHSVLPGNSEP 193
S +T N G QVLKR + L ++ S PIRR+RQK + S+ R S GN P
Sbjct: 335 SSQTRANSLVSGCRQVLKRRGAELENELGSIGPIRRIRQKSNMMSTFRDARSSPRGNFLP 394
Query: 194 CSLTVKKGFQD--------PSQN-------QCPHNLDAREETEGNKILNKAVASGSVQSR 328
S T+ D PS Q +AR E KI + V + S QS
Sbjct: 395 -SRTIGSDLTDGGSPIRDSPSSKRLLLGTGQSVEPAEARRNDEDGKISSDNVLAASPQSN 453
Query: 329 EMENKILQGLDKLLPSPKRK-----------SMKLKDNPVEESPSYGIHTHPKGTGD 466
+M KI + L+ ++PSPK K S + PV + P GT D
Sbjct: 454 KMAEKIFEQLNIIVPSPKEKLSLPQFAAGNASCSMSKQPVRQG------NEPNGTSD 504
>gb|ABF99255.1| expressed protein [Oryza sativa Japonica Group]
Length = 1142
Score = 57.0 bits (136), Expect = 4e-06
Identities = 55/177 (31%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Frame = +2
Query: 20 SEKTPCNEQAGG--QVLKRSSSTLYSDFRSTCPIRRVRQKLGINSSNRIMHSVLPGNSEP 193
S +T N G QVLKR + L ++ S PIRR+RQK + S+ R S GN P
Sbjct: 132 SSQTRANSLVSGCRQVLKRRGAELENELGSIGPIRRIRQKSNMMSTFRDARSSPRGNFLP 191
Query: 194 CSLTVKKGFQD--------PSQN-------QCPHNLDAREETEGNKILNKAVASGSVQSR 328
S T+ D PS Q +AR E KI + V + S QS
Sbjct: 192 -SRTIGSDLTDGGSPIRDSPSSKRLLLGTGQSVEPAEARRNDEDGKISSDNVLAASPQSN 250
Query: 329 EMENKILQGLDKLLPSPKRK-----------SMKLKDNPVEESPSYGIHTHPKGTGD 466
+M KI + L+ ++PSPK K S + PV + P GT D
Sbjct: 251 KMAEKIFEQLNIIVPSPKEKLSLPQFAAGNASCSMSKQPVRQG------NEPNGTSD 301
>ref|NP_001051501.1| Os03g0788300 [Oryza sativa Japonica Group]
gi|50355740|gb|AAT75265.1| putative cell wall protein
[Oryza sativa Japonica Group]
gi|113549972|dbj|BAF13415.1| Os03g0788300 [Oryza sativa
Japonica Group]
Length = 1184
Score = 57.0 bits (136), Expect = 4e-06
Identities = 55/177 (31%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Frame = +2
Query: 20 SEKTPCNEQAGG--QVLKRSSSTLYSDFRSTCPIRRVRQKLGINSSNRIMHSVLPGNSEP 193
S +T N G QVLKR + L ++ S PIRR+RQK + S+ R S GN P
Sbjct: 174 SSQTRANSLVSGCRQVLKRRGAELENELGSIGPIRRIRQKSNMMSTFRDARSSPRGNFLP 233
Query: 194 CSLTVKKGFQD--------PSQN-------QCPHNLDAREETEGNKILNKAVASGSVQSR 328
S T+ D PS Q +AR E KI + V + S QS
Sbjct: 234 -SRTIGSDLTDGGSPIRDSPSSKRLLLGTGQSVEPAEARRNDEDGKISSDNVLAASPQSN 292
Query: 329 EMENKILQGLDKLLPSPKRK-----------SMKLKDNPVEESPSYGIHTHPKGTGD 466
+M KI + L+ ++PSPK K S + PV + P GT D
Sbjct: 293 KMAEKIFEQLNIIVPSPKEKLSLPQFAAGNASCSMSKQPVRQG------NEPNGTSD 343
>emb|CBI24989.3| unnamed protein product [Vitis vinifera]
Length = 1196
Score = 56.2 bits (134), Expect = 7e-06
Identities = 45/116 (38%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 59 VLKRSSSTLYSDFRSTCPIRRVRQKLGINSSNRIMHSVLPGNSEPCSLTVKKGFQDPSQN 238
+LKR SS L SD S PIRR+RQK P P SL G S
Sbjct: 273 LLKRRSSVLDSDIGSVGPIRRIRQK--------------PNLLSPKSLGTAVGGSPLSAT 318
Query: 239 QCPHNLDAREETEG-NKILNKAVASGSVQSREMENKILQGLDKLLPSPKRKSMKLK 403
H G N + + A QS EM KIL+ LDKL PSPK KS +LK
Sbjct: 319 GTGHKFSKTLIENGYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELK 374