BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026764
         (1225 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]           439   e-120
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]        439   e-120
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]        439   e-120
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   429   e-117
ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...   421   e-115
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   405   e-110
ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   402   e-109
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   401   e-109
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...   400   e-109
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...   397   e-108
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...   397   e-108
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...   397   e-108
ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi...   397   e-108
ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi...   394   e-107
emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]       392   e-106
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...   392   e-106
ref|XP_002314046.2| DNA topoisomerase family protein [Populus tr...   386   e-105
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...   384   e-104
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              382   e-103
ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza b...   381   e-103

>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score =  439 bits (1128), Expect = e-120
 Identities = 221/322 (68%), Positives = 256/322 (79%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN E M+P+ PWY+GFKG IEK+A+KEA
Sbjct: 828  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEA 887

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GVTYTITG IEE+D TTLRITELPVRRWTQDY+EFLES++TGND    PFIK++R+++DD
Sbjct: 888  GVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDD 943

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV FEV L+EENM +A+QEGL KKFKLTTTIST+NMHLFDS  +IKKYDTPEQILEEFF
Sbjct: 944  TTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFF 1003

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            +LRF FYEKR                  VRFILGVV+ EI+VN RKRADLFLELQ KGFT
Sbjct: 1004 HLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFT 1063

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K ++ AVA            S  + K G  ASDYDYL+SM I SLT EKVQELC
Sbjct: 1064 PFPKKAKTVEVAVAGATDDTEETEENSEVSAK-GLQASDYDYLLSMAIGSLTLEKVQELC 1122

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL+ EV++LR+ +P++LW
Sbjct: 1123 ADRDKLQQEVEDLRKATPKSLW 1144


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score =  439 bits (1128), Expect = e-120
 Identities = 221/322 (68%), Positives = 256/322 (79%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN E M+P+ PWY+GFKG IEK+A+KEA
Sbjct: 639  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEA 698

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GVTYTITG IEE+D TTLRITELPVRRWTQDY+EFLES++TGND    PFIK++R+++DD
Sbjct: 699  GVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDD 754

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV FEV L+EENM +A+QEGL KKFKLTTTIST+NMHLFDS  +IKKYDTPEQILEEFF
Sbjct: 755  TTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFF 814

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            +LRF FYEKR                  VRFILGVV+ EI+VN RKRADLFLELQ KGFT
Sbjct: 815  HLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFT 874

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K ++ AVA            S  + K G  ASDYDYL+SM I SLT EKVQELC
Sbjct: 875  PFPKKAKTVEVAVAGATDDTEETEENSEVSAK-GLQASDYDYLLSMAIGSLTLEKVQELC 933

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL+ EV++LR+ +P++LW
Sbjct: 934  ADRDKLQQEVEDLRKATPKSLW 955


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score =  439 bits (1128), Expect = e-120
 Identities = 221/322 (68%), Positives = 256/322 (79%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN E M+P+ PWY+GFKG IEK+A+KEA
Sbjct: 828  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEA 887

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GVTYTITG IEE+D TTLRITELPVRRWTQDY+EFLES++TGND    PFIK++R+++DD
Sbjct: 888  GVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDD 943

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV FEV L+EENM +A+QEGL KKFKLTTTIST+NMHLFDS  +IKKYDTPEQILEEFF
Sbjct: 944  TTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFF 1003

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            +LRF FYEKR                  VRFILGVV+ EI+VN RKRADLFLELQ KGFT
Sbjct: 1004 HLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFT 1063

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K ++ AVA            S  + K G  ASDYDYL+SM I SLT EKVQELC
Sbjct: 1064 PFPKKAKTVEVAVAGATDDTEETEENSEVSAK-GLQASDYDYLLSMAIGSLTLEKVQELC 1122

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL+ EV++LR+ +P++LW
Sbjct: 1123 ADRDKLQQEVEDLRKATPKSLW 1144


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  429 bits (1102), Expect = e-117
 Identities = 220/374 (58%), Positives = 264/374 (70%), Gaps = 3/374 (0%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKS-ATKE 179
            VLVNGSEGIGTGWSS IPNYNP+DI+ANVRRLLN E M+P++PWY+GF+G IEK+  TK+
Sbjct: 831  VLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEKTDPTKQ 890

Query: 180  AGVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHND 359
              V YT+ G IEE++ TTLRI+ELPVR+WTQDYKEFLES+MTGNDKIK+PFIKDY+EHND
Sbjct: 891  ESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKEHND 950

Query: 360  DKTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEF 539
            D TVHFEV +SEEN+ +A+QEGL +KFKLTT IST+NMHLFDSN  IKKY+TPEQILEEF
Sbjct: 951  DTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQILEEF 1010

Query: 540  FNLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGF 719
            F+LR  FYEKR                  VRFILGVVR EI+V+ RKRADLF EL QKGF
Sbjct: 1011 FHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQKGF 1070

Query: 720  TPFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQEL 899
            TPFPKK+K ++ AVA            +    KGG  A+DY+YL+SM I +LT EKVQEL
Sbjct: 1071 TPFPKKSKSVEIAVAGATDDTEEAEENTDAVSKGGVRATDYEYLLSMAIGTLTLEKVQEL 1130

Query: 900  CAQKDKLEAEVDELRRTSPQTLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHI--AG 1073
            CA +DKL   VD+L++ +P+ LW                                +  AG
Sbjct: 1131 CADRDKLNKGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSEAG 1190

Query: 1074 VAPSKQAAKKPRKN 1115
            +  S+QA K PRKN
Sbjct: 1191 MKVSRQAPKNPRKN 1204


>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score =  421 bits (1081), Expect = e-115
 Identities = 223/409 (54%), Positives = 268/409 (65%), Gaps = 2/409 (0%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VL+NGSEGIGTGWSSY+PNYNP+D+ ANV+RLLN E M P+EPWY+GFKG IEKSATKE 
Sbjct: 840  VLINGSEGIGTGWSSYVPNYNPRDVAANVKRLLNGESMLPMEPWYKGFKGTIEKSATKEG 899

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GV YT++G +EEI+ TTLRITELP+RRWT+DYK +LES+ TG++K KEPFI DY+EHN D
Sbjct: 900  GVGYTVSGIVEEINETTLRITELPIRRWTEDYKVYLESLRTGSEKTKEPFIVDYKEHNTD 959

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
              VHF+V L EENM I++QEGL K FKLTTTIST+NMHLF++  VIKKYDTPEQILEEFF
Sbjct: 960  TRVHFDVLLPEENMKISQQEGLMKMFKLTTTISTSNMHLFNAKGVIKKYDTPEQILEEFF 1019

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            +LR  +Y KR                   RFILGVV  EIVV+KRKRADL LEL+ KGFT
Sbjct: 1020 HLRLDYYGKRKKVLLDNLELELLKLDNKARFILGVVNGEIVVSKRKRADLVLELRDKGFT 1079

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK+K ++AA+A            SP+    G  ASDYDYL+SM I +LT EKVQELC
Sbjct: 1080 PFPKKSKNVEAALA-GATPVDEEGEESPEVDDRGINASDYDYLLSMAIGTLTIEKVQELC 1138

Query: 903  AQKDKLEAEVDELRRTSPQTLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHIAGVAP 1082
            A+KDKLE +V ELR  +P+ LW                              +  A +  
Sbjct: 1139 AEKDKLEHDVKELRGLTPKALWIKDLDAFLAQLDAEAVQEAKDDEYELNNMVSDAAKI-- 1196

Query: 1083 SKQAAKKPRKNTANKLSVD--GTESSSTGTDAGQXXXXXXXXXXAPAKK 1223
             +Q  K PRKNT      +   T++S T T              AP KK
Sbjct: 1197 FRQVGKNPRKNTKKPAPAEHVDTDASDTTTTEVAAKPKKRAPKKAPTKK 1245


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  405 bits (1041), Expect = e-110
 Identities = 199/322 (61%), Positives = 247/322 (76%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VL+NGSEGIGTGWSSY+PNYNP+D+VANVRRLLN+EPM+P++PWY+GFKG IEK+ATKEA
Sbjct: 827  VLINGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEKTATKEA 886

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            G TYT+TG IEE++ TTLRI+ELPVRRWT+DYK+FLESM   NDK K+PFIK+ R + D+
Sbjct: 887  GATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKEVRAYGDE 946

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             +V FEV +SEEN+ +A+QEGL KKFKL TTIST+NMHLFDSN  IKKYD PE ILEEF+
Sbjct: 947  NSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDSNGKIKKYDNPEDILEEFY 1006

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R  +YEKR                  V+FILGVV+ EI+VN RKRADL LEL++KGFT
Sbjct: 1007 HVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKVEIIVNNRKRADLLLELKEKGFT 1066

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K ++A VA            S +    G  A DYDYL+SM I +LT EKVQELC
Sbjct: 1067 PFPKK-KAVEAVVA----DTSDDAEDSEEELNRGVRAGDYDYLLSMPIGTLTLEKVQELC 1121

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A++D+L  EV+++R  +P+ LW
Sbjct: 1122 AERDQLNGEVEDMRNATPKLLW 1143


>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score =  402 bits (1034), Expect = e-109
 Identities = 201/322 (62%), Positives = 243/322 (75%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSY+PNYNP+D+VANVRRLLN+E M+P++PWY+GFKG IEK+ATKE 
Sbjct: 828  VLVNGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGTIEKTATKET 887

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            G TYT+TG IEE   TTLRI+ELPVRRWT+DYK+FLESM    DK K+ FIK+ R + D+
Sbjct: 888  GATYTVTGIIEEFSETTLRISELPVRRWTEDYKQFLESMTVSTDKSKDAFIKEVRAYGDE 947

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             +V FEV +SEEN+ +A+QEGL KKFKLTTTIST+NMHLFDS   IKKYD PE+ILEEF+
Sbjct: 948  NSVCFEVIMSEENLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFY 1007

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R  +YEKR                  VRFILGVV+ EI+VN RKRADL LEL+ KGFT
Sbjct: 1008 HVRLEYYEKRKKTLLEILELELLRIENKVRFILGVVKGEIIVNNRKRADLLLELKNKGFT 1067

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K ++A VA            SP+    G  ASDYDYL+SM I +LT EKVQELC
Sbjct: 1068 PFPKK-KPVEAVVA-DSTDDAEDSEESPEESNKGVRASDYDYLLSMAIGTLTLEKVQELC 1125

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL AEV+++R  +P+ LW
Sbjct: 1126 ADRDKLNAEVEDMRNATPKDLW 1147


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score =  401 bits (1030), Expect = e-109
 Identities = 198/322 (61%), Positives = 245/322 (76%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSY+PNYNP+D+VANVRRLLN+E M+P++PWY+GFKG+IEK+ATKE 
Sbjct: 828  VLVNGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGKIEKTATKET 887

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            G TYT+TG IEE+  TTLRI+ELPVRRWT+DYK+FLESM    DK K+ FIK+ R + D+
Sbjct: 888  GATYTVTGIIEEVSETTLRISELPVRRWTEDYKQFLESMTVSTDKAKDSFIKEVRAYGDE 947

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             +V FEV +SE+N+ +A+QEGL KKFKLTTTIST+NMHLFDS   IKKYD PE+ILEEF+
Sbjct: 948  NSVCFEVIMSEDNLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFY 1007

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R  +YEKR                  V+FILGVV+ EI+VN RKRA+L LEL+ KGFT
Sbjct: 1008 HVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKGEIIVNNRKRAELLLELKNKGFT 1067

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K ++A VA            SP+    G  ASDYDYL+SM I +LT EKVQELC
Sbjct: 1068 PFPKK-KPVEAVVA-DSTDDADDSEESPEESSRGVRASDYDYLLSMAIGTLTLEKVQELC 1125

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL AEV+++R  +P+ LW
Sbjct: 1126 ADRDKLNAEVEDMRNATPKHLW 1147


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score =  400 bits (1028), Expect = e-109
 Identities = 216/384 (56%), Positives = 250/384 (65%), Gaps = 7/384 (1%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNG EGIGTGWS++IPNYNP+DIVAN+RRLLN E M+P+ PWY+GFKG IEK A+KEA
Sbjct: 845  VLVNGCEGIGTGWSTFIPNYNPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEA 904

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGN-----DKIKEPFIKDYR 347
            G +YT+ G I E++ TTLRITELP+RRWT DYK FL S+  GN     +  K+PFIKD+R
Sbjct: 905  GCSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKDPFIKDFR 964

Query: 348  EHNDDKTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQI 527
            ++ DD TV FEV LSEENM IA+QEGL KKFKLTTTIST+NMHLFDS  VIKKYD PEQI
Sbjct: 965  KYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQI 1024

Query: 528  LEEFFNLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQ 707
            LEEFF+LR  +YE+R                  VRFILGVVR EI+VN RKRADLFLEL 
Sbjct: 1025 LEEFFHLRLEYYERRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFLELH 1084

Query: 708  QKGFTPFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEK 887
            QKGFTP PKK+K + A               S      G  ASDYDYL+SM I +LT EK
Sbjct: 1085 QKGFTPIPKKSKAVVAGATDDKDEAEDSLEVS------GVRASDYDYLLSMAIGTLTLEK 1138

Query: 888  VQELCAQKDKLEAEVDELRRTSPQTLW--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 1061
            VQ+LCA  DKL  EVD LR+T+P  LW                                N
Sbjct: 1139 VQQLCADHDKLNGEVDNLRKTTPIVLWVKDLEALEMQLDVLDKYDAEAEEARKKLKGDAN 1198

Query: 1062 HIAGVAPSKQAAKKPRKNTANKLS 1133
              AG   SKQA K PRK T   ++
Sbjct: 1199 GEAGFKVSKQAPKNPRKYTKKAIN 1222


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score =  397 bits (1019), Expect = e-108
 Identities = 204/322 (63%), Positives = 242/322 (75%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN E M+P+ PWY+GF+G IEK+A+KEA
Sbjct: 827  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEA 886

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GVTYT+TG IEE++ TTLRI ELP+RRWTQDY+EFLES++  ND     FI+ +R+++DD
Sbjct: 887  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDD 942

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV FEV LSEE+M   +QEGL KKFKLTTTIST+NMHLFDS  VIKKYDTPEQILEEFF
Sbjct: 943  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1002

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R  FYEKR                  VRFILGVV  EIVVN RKR DL LEL+QKGFT
Sbjct: 1003 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1062

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPK +K I+A VA            +P+    G  + DYDYL+SM I +LT EKVQ L 
Sbjct: 1063 PFPKNSKSIEAVVA-GATDETEESEENPEV-VNGVQSIDYDYLLSMAIGTLTLEKVQGLL 1120

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL  EVD+LR+ +P++LW
Sbjct: 1121 ADRDKLNEEVDDLRKATPESLW 1142


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score =  397 bits (1019), Expect = e-108
 Identities = 204/322 (63%), Positives = 242/322 (75%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN E M+P+ PWY+GF+G IEK+A+KEA
Sbjct: 827  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEA 886

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GVTYT+TG IEE++ TTLRI ELP+RRWTQDY+EFLES++  ND     FI+ +R+++DD
Sbjct: 887  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDD 942

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV FEV LSEE+M   +QEGL KKFKLTTTIST+NMHLFDS  VIKKYDTPEQILEEFF
Sbjct: 943  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1002

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R  FYEKR                  VRFILGVV  EIVVN RKR DL LEL+QKGFT
Sbjct: 1003 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1062

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPK +K I+A VA            +P+    G  + DYDYL+SM I +LT EKVQ L 
Sbjct: 1063 PFPKNSKSIEAVVA-GATDETEESEENPEV-VNGVQSIDYDYLLSMAIGTLTLEKVQGLL 1120

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL  EVD+LR+ +P++LW
Sbjct: 1121 ADRDKLNEEVDDLRKATPESLW 1142


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score =  397 bits (1019), Expect = e-108
 Identities = 204/322 (63%), Positives = 242/322 (75%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN E M+P+ PWY+GF+G IEK+A+KEA
Sbjct: 827  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEA 886

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GVTYT+TG IEE++ TTLRI ELP+RRWTQDY+EFLES++  ND     FI+ +R+++DD
Sbjct: 887  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDD 942

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV FEV LSEE+M   +QEGL KKFKLTTTIST+NMHLFDS  VIKKYDTPEQILEEFF
Sbjct: 943  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1002

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R  FYEKR                  VRFILGVV  EIVVN RKR DL LEL+QKGFT
Sbjct: 1003 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1062

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPK +K I+A VA            +P+    G  + DYDYL+SM I +LT EKVQ L 
Sbjct: 1063 PFPKNSKSIEAVVA-GATDETEESEENPEV-VNGVQSIDYDYLLSMAIGTLTLEKVQGLL 1120

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DKL  EVD+LR+ +P++LW
Sbjct: 1121 ADRDKLNEEVDDLRKATPESLW 1142


>ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi|162679677|gb|EDQ66121.1|
            predicted protein [Physcomitrella patens]
          Length = 1172

 Score =  397 bits (1019), Expect = e-108
 Identities = 197/322 (61%), Positives = 241/322 (74%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSS++PNYNP++IVAN+RRLL  + M+P+ PWY+GFKG IE SATK++
Sbjct: 831  VLVNGSEGIGTGWSSFVPNYNPREIVANLRRLLAGQEMEPMHPWYKGFKGSIECSATKDS 890

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            G TYTITG I++ID TT++I+ELPVR+WTQDYKEFL+ MMT +DK KEPFIKD+REHN D
Sbjct: 891  GFTYTITGAIDQIDETTIKISELPVRKWTQDYKEFLDVMMTPSDKNKEPFIKDFREHNTD 950

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
              VHFE++LSEENM IA  EGL KKFKLTTTIST+NMHLFD+  +IKKYDTPEQILEEFF
Sbjct: 951  TKVHFELSLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDNKGIIKKYDTPEQILEEFF 1010

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R   Y KR                  VRFILGVV+ EI+VN RKRADL  +LQ+KGFT
Sbjct: 1011 HIRLDMYVKRKAVQLQNLEYELHKVDNKVRFILGVVKGEIIVNNRKRADLLADLQKKGFT 1070

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK+K  D  V                    G  A+DY+YL+SM I +LT EKVQ+L 
Sbjct: 1071 PFPKKSKSSDPPVVGADPLPEDDEQDEKVK---GIRAADYEYLLSMPIGTLTFEKVQQLR 1127

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
             Q+DK+E EV+EL++ +P+ LW
Sbjct: 1128 GQRDKMEGEVEELKKATPEALW 1149


>ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi|162690273|gb|EDQ76641.1|
            predicted protein [Physcomitrella patens]
          Length = 1238

 Score =  394 bits (1013), Expect = e-107
 Identities = 200/322 (62%), Positives = 237/322 (73%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSS++PNYNP++IVAN+RRLL  + + P+ PWY+ F G IE SATK+ 
Sbjct: 832  VLVNGSEGIGTGWSSFVPNYNPREIVANIRRLLAGQELTPMHPWYKSFMGTIECSATKDI 891

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            G+TYTITGTIE+ID TT++I ELPVR+WTQDYKEFL+++MT +DK KEPFIKD+REHN D
Sbjct: 892  GLTYTITGTIEQIDETTIKILELPVRKWTQDYKEFLDALMTPSDKNKEPFIKDFREHNTD 951

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
              VHFE+TLSEENM IA  EGL KKFKLTTTIST+NMHLFD+  +IKKYDTPEQILEEFF
Sbjct: 952  TKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDAKGIIKKYDTPEQILEEFF 1011

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            ++R   Y KR                  VRFILGVV+ EI+VN RKR DL  ELQ KGF 
Sbjct: 1012 HIRLDLYVKRKAVQLQNLQYELVKVDNKVRFILGVVKGEIIVNNRKRIDLLSELQHKGFA 1071

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKK K  D  V               +  KG  VA DYDYL+SM I SLT EKVQ+L 
Sbjct: 1072 PFPKKAKSPDPPVV--GADPLPEDNEQDEKVKGVKVA-DYDYLLSMPIGSLTYEKVQQLR 1128

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
             Q+DK+E EV+EL+R +P+ LW
Sbjct: 1129 GQRDKMEEEVEELKRATPEALW 1150


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]
          Length = 1467

 Score =  392 bits (1007), Expect = e-106
 Identities = 199/322 (61%), Positives = 239/322 (74%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLL+ + M P++PWY+GF G IEK+  KE+
Sbjct: 798  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLDGDAMVPMDPWYRGFTGTIEKTV-KES 856

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GV+YT  G IEE+  T+LRI+ELP+RRWTQDYKEFLES+  GNDK K+PFI+ + +H+D 
Sbjct: 857  GVSYTACGIIEEVSETSLRISELPIRRWTQDYKEFLESISEGNDKAKDPFIEGFTQHSDH 916

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV   V L EE +  A+QEGL KKFKLTT+IST+NMHLFD   VIKKYDTPEQILE+FF
Sbjct: 917  STVDIIVHLREEKLMAAKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQILEDFF 976

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            +LR  FYEKR                  VRFILGVV  EI+V+ RKRADLFLELQQKGFT
Sbjct: 977  HLRLEFYEKRKKVLLEDLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFT 1036

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKKTK ++  VA            S  A + GA  SDY+YL+SM I +LT E+VQ L 
Sbjct: 1037 PFPKKTKALEPEVAGATENTEDAEENSEAAIEKGARISDYEYLISMAIGTLTIERVQALL 1096

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DK  AEVDELR+++P++LW
Sbjct: 1097 ADRDKANAEVDELRKSTPRSLW 1118


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score =  392 bits (1006), Expect = e-106
 Identities = 200/322 (62%), Positives = 236/322 (73%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYN +DIVANVRRLLN E M P++PWY+GF G IEK+  KE+
Sbjct: 834  VLVNGSEGIGTGWSSYIPNYNTRDIVANVRRLLNGEAMVPMDPWYRGFSGTIEKTV-KES 892

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            GV+YT+ G IEE + TT+RI+ELP+RRWTQDYKEFLES+  GNDK K+PFI+ + +H+D 
Sbjct: 893  GVSYTVCGVIEEGNETTVRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQHSDH 952

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV   V L EEN+  ARQEGL KKFKLTT+IST+NMHLFD   VIKKYDTPEQILEEFF
Sbjct: 953  STVDIIVHLPEENLMAARQEGLLKKFKLTTSISTSNMHLFDPKGVIKKYDTPEQILEEFF 1012

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
            +LR  FYEKR                  VRFIL VV  EI+V+ R+RADLFLELQQKGFT
Sbjct: 1013 HLRLEFYEKRKKVLLDNLEMELLKLENKVRFILAVVNGEIIVSNRRRADLFLELQQKGFT 1072

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKKTK  +  VA            S  A   GA  SDY+YL+SM I +LT E+VQ LC
Sbjct: 1073 PFPKKTKAQEPEVAGAIEDTEETEENSESASGNGARISDYEYLISMAIGTLTIERVQALC 1132

Query: 903  AQKDKLEAEVDELRRTSPQTLW 968
            A +DK+  EV ELR ++P++LW
Sbjct: 1133 ADRDKVNNEVAELRNSTPRSLW 1154


>ref|XP_002314046.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550331162|gb|EEE88001.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1482

 Score =  386 bits (992), Expect = e-105
 Identities = 213/399 (53%), Positives = 254/399 (63%), Gaps = 13/399 (3%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNG EGIGTGWS++IPNYNP+D+VAN+RRLLN E M+P+ PWY+GFKG IEK A+KE 
Sbjct: 831  VLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEG 890

Query: 183  GVT-YTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGN-----DKIKEPFIKDY 344
            G + YT+ G I E++ TTLRITELP+RRWT DYK FL S+  G      +  K+PF+KD+
Sbjct: 891  GCSSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGTRDENGNLPKDPFVKDF 950

Query: 345  REHNDDKTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQ 524
            R++ DD  VHFEV LSEENM +A+QEGL KKFKLTTTIST+NMHLFDS  VIKKYD PEQ
Sbjct: 951  RKYGDDAAVHFEVQLSEENMLVAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQ 1010

Query: 525  ILEEFFNLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLEL 704
            ILE FF+LR  +YE R                  VRFILGVVR EI+VN RKRADL LEL
Sbjct: 1011 ILENFFHLRLEYYETRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLLLEL 1070

Query: 705  QQKGFTPFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEE 884
             QKGF   PKK+K    AV             SP     G  ASDYDYL+SM I +LT E
Sbjct: 1071 HQKGFNAIPKKSK----AVVAGATDDTEEAEDSPDV--SGVRASDYDYLLSMAIGTLTLE 1124

Query: 885  KVQELCAQKDKLEAEVDELRRTSPQTLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNH 1064
            +VQ+LCA +DKL  EVD LR+T+P+ LW                                
Sbjct: 1125 RVQQLCADRDKLNGEVDSLRKTTPKVLWVKDLEALEMQLDMLDEYDAEAEEARRKLKGGG 1184

Query: 1065 I---AGVAPSKQAAKKPRKNTA----NKLSVDGTESSST 1160
                AG   SKQA K PRKNT      ++SV+ T +SS+
Sbjct: 1185 AKGEAGFKVSKQAPKYPRKNTKKAINEEVSVETTGTSSS 1223


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score =  384 bits (985), Expect = e-104
 Identities = 204/374 (54%), Positives = 245/374 (65%), Gaps = 2/374 (0%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWSSYIPNYNP+DIVANVRRLLN + M P++PWY+GF G IEK+  KE 
Sbjct: 831  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGDEMVPMDPWYRGFTGFIEKTV-KET 889

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHNDD 362
            G +YT  G IEE++ TTLRI+ELP+RRWTQDYKEFLES+  GNDK K+PFI+ + +H+D 
Sbjct: 890  GTSYTACGIIEEVNETTLRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQHSDH 949

Query: 363  KTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEFF 542
             TV   V L EEN+  AR+EGL KKF+LTT+I+TTNMHLFD   VIKKYDT EQILEEFF
Sbjct: 950  STVEILVHLPEENLMAARKEGLLKKFRLTTSIATTNMHLFDPKGVIKKYDTAEQILEEFF 1009

Query: 543  NLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGFT 722
             LR  FYEKR                  VRFILGVV  EI+V+ RKRADLFLELQQKGFT
Sbjct: 1010 PLRLEFYEKRKKVLLDNLELELLKMENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFT 1069

Query: 723  PFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQELC 902
            PFPKKTK ++  VA            S      G   SDY+YL+SM I +LT E+V+ L 
Sbjct: 1070 PFPKKTKSVEPEVAGATEDTEETEENSETVISNGVRISDYEYLISMAIGTLTIERVEALL 1129

Query: 903  AQKDKLEAEVDELRRTSPQTLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHI--AGV 1076
            A +DK+  +V++LR ++P++LW                              N I  A V
Sbjct: 1130 ADRDKVNEQVNDLRGSTPKSLWLKDLDVLEAELNELEKSEALADEAKRKSRNNQIKNAPV 1189

Query: 1077 APSKQAAKKPRKNT 1118
                + A KPRKNT
Sbjct: 1190 GKVSKQAPKPRKNT 1203


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  382 bits (981), Expect = e-103
 Identities = 205/374 (54%), Positives = 245/374 (65%), Gaps = 3/374 (0%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKS-ATKE 179
            VLVNGSEGIGTGWSS IPNYNP+DI+ANVRRLLN E M+P++PWY+GF+G IEK+  TK+
Sbjct: 831  VLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEKTDPTKQ 890

Query: 180  AGVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYREHND 359
              V YT+ G IEE++ TTLRI+ELPVR+WTQDYKEFLES+MTGNDKIK+PFIKDY+EHND
Sbjct: 891  ESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKEHND 950

Query: 360  DKTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQILEEF 539
            D TVHFEV +SEEN+ +A+QEGL +KFKLTT IST+NMHLFDSN  IKKY+TPEQILEEF
Sbjct: 951  DTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQILEEF 1010

Query: 540  FNLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEIVVNKRKRADLFLELQQKGF 719
            F+LR  FYEKR                  VRFILGVVR EI+V+ RKRADLF EL QK  
Sbjct: 1011 FHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQK-- 1068

Query: 720  TPFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDYDYLMSMRIDSLTEEKVQEL 899
                                                 A+DY+YL+SM I +LT EKVQEL
Sbjct: 1069 -----------------------------------VRATDYEYLLSMAIGTLTLEKVQEL 1093

Query: 900  CAQKDKLEAEVDELRRTSPQTLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHI--AG 1073
            CA +DKL   VD+L++ +P+ LW                                +  AG
Sbjct: 1094 CADRDKLNKGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSEAG 1153

Query: 1074 VAPSKQAAKKPRKN 1115
            +  S+QA K PRKN
Sbjct: 1154 MKVSRQAPKNPRKN 1167


>ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza brachyantha]
          Length = 1506

 Score =  381 bits (979), Expect = e-103
 Identities = 210/404 (51%), Positives = 259/404 (64%), Gaps = 20/404 (4%)
 Frame = +3

Query: 3    VLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSATKEA 182
            VLVNGSEGIGTGWS++IPNYNP+DIVAN+RRLLNNEP++P++PWY+GFKG I+K++TK  
Sbjct: 840  VLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNNEPVEPMDPWYRGFKGSIQKTSTKAG 899

Query: 183  GVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIK------------- 323
            GV+YT+TG IE +D TTLRITELP+RRW+QDYKEFL S + G DK K             
Sbjct: 900  GVSYTVTGIIEVLDDTTLRITELPIRRWSQDYKEFLIS-IGGMDKSKDKDKGKGKGKEKE 958

Query: 324  -------EPFIKDYREHNDDKTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLF 482
                   EPFI+ +  H+DDK V F +TLS+ENM IA+QEGLEKKFKLTTTI TTNMHLF
Sbjct: 959  KDKDKDIEPFIEVFDTHSDDKNVEFLITLSKENMAIAKQEGLEKKFKLTTTIGTTNMHLF 1018

Query: 483  DSNSVIKKYDTPEQILEEFFNLRFVFYEKRXXXXXXXXXXXXXXXXXXVRFILGVVRDEI 662
            DSN  I+KYDTPE IL+EFF LR  FYEKR                  VRFIL VV  +I
Sbjct: 1019 DSNGKIRKYDTPEDILQEFFGLRLEFYEKRKRVLLENIELELKKLSNKVRFILAVVEGDI 1078

Query: 663  VVNKRKRADLFLELQQKGFTPFPKKTKGIDAAVAXXXXXXXXXXXXSPQAGKGGAVASDY 842
            +VN RKRADLF+EL+QKGF PFPKK +  + A A            SP+  K G  +SDY
Sbjct: 1079 IVNNRKRADLFVELRQKGFDPFPKKIQSTEPA-AVGASEEDEENEESPETVK-GVSSSDY 1136

Query: 843  DYLMSMRIDSLTEEKVQELCAQKDKLEAEVDELRRTSPQTLWXXXXXXXXXXXXXXXXXX 1022
            +YL+SM I +LT EKVQEL A+K +LE  V EL+ T+P+ LW                  
Sbjct: 1137 EYLLSMSIGTLTLEKVQELIAEKGRLENGVAELKGTTPKLLW-MRDLDEFEKQLDVLDEE 1195

Query: 1023 XXXXXXXXXXXXNHIAGVAPSKQAAKKPRKNTANKLSVDGTESS 1154
                        N   GVAP   A ++P+K   N  + + T+ +
Sbjct: 1196 DRINAEERRSTRNVGHGVAPKAAARRRPKKTATNSEAAEITDGN 1239