BLASTX nr result
ID: Zingiber24_contig00026696
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00026696 (220 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD54295.1| hypothetical protein [Oryza sativa Japonica Grou... 58 1e-06 ref|NP_001066174.1| Os12g0152200 [Oryza sativa Japonica Group] g... 52 4e-06 >dbj|BAD54295.1| hypothetical protein [Oryza sativa Japonica Group] gi|222635713|gb|EEE65845.1| hypothetical protein OsJ_21616 [Oryza sativa Japonica Group] Length = 102 Score = 58.2 bits (139), Expect = 1e-06 Identities = 29/51 (56%), Positives = 37/51 (72%) Frame = +3 Query: 63 RGQSPWLVLYHNPKVDPSAITFYALDERREYTIPVPDPPISDRLFLGSAHG 215 R Q+P L LY SA+ Y+L ERREYTIP+PDPPIS+R ++GS+HG Sbjct: 53 RRQTPCL-LYCTEAAGASAVGMYSLLERREYTIPLPDPPISNRTWIGSSHG 102 >ref|NP_001066174.1| Os12g0152200 [Oryza sativa Japonica Group] gi|77553033|gb|ABA95829.1| F-box domain containing protein [Oryza sativa Japonica Group] gi|77553045|gb|ABA95841.1| F-box domain containing protein [Oryza sativa Japonica Group] gi|113648681|dbj|BAF29193.1| Os12g0152200 [Oryza sativa Japonica Group] gi|125535791|gb|EAY82279.1| hypothetical protein OsI_37489 [Oryza sativa Indica Group] gi|125535792|gb|EAY82280.1| hypothetical protein OsI_37490 [Oryza sativa Indica Group] gi|125578521|gb|EAZ19667.1| hypothetical protein OsJ_35243 [Oryza sativa Japonica Group] gi|125578531|gb|EAZ19677.1| hypothetical protein OsJ_35253 [Oryza sativa Japonica Group] Length = 419 Score = 52.4 bits (124), Expect(2) = 4e-06 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = +3 Query: 63 RGQSPWLVLYHNPKVDPSAITFYAL-DERREYTIPVPDPPISDRLFLGSAHGW 218 R Q+P L LY P A Y+L D+ YT+P+PDPPI++R +GS+HGW Sbjct: 54 RAQTPCL-LYTTAAAGPRAAVLYSLADKTTSYTVPLPDPPIAERHIVGSSHGW 105 Score = 23.9 bits (50), Expect(2) = 4e-06 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +1 Query: 1 AAVCLPWSAAVRDLSTDALSSAGRAP 78 AAVC W A RD+ L S + P Sbjct: 33 AAVCKLWRATARDIRRLGLYSRAQTP 58