BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026541
         (922 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japo...   306   7e-81
ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group] g...   306   7e-81
ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synth...   305   2e-80
ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synth...   302   1e-79
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...   296   7e-78
ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synth...   296   1e-77
gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| T...   295   2e-77
gb|EXC11333.1| Putative tRNA pseudouridine synthase [Morus notab...   294   4e-77
ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [S...   293   5e-77
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   292   1e-76
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth...   291   2e-76
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   291   2e-76
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   291   2e-76
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              291   2e-76
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   290   4e-76
ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutr...   284   3e-74
gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ...   283   6e-74
gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus...   281   2e-73
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu...   280   4e-73
ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Caps...   280   4e-73

>gb|EAZ26854.1| hypothetical protein OsJ_10771 [Oryza sativa Japonica Group]
          Length = 516

 Score =  306 bits (784), Expect = 7e-81
 Identities = 150/238 (63%), Positives = 190/238 (79%), Gaps = 2/238 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LE+AI+KAGGIL+SN+GKLQK
Sbjct: 65  RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI L+N++NSNLP+NV+VFS+LP+
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD RREC  R Y YLLPAEIIGI G CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEHEERAILS 891
           R+KYRK  +G+   +K +   ++++P+   +++SS D       D T S+H+E  + S
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSD-------DGTTSDHDEEDLNS 295


>ref|NP_001050056.1| Os03g0338600 [Oryza sativa Japonica Group]
           gi|108708043|gb|ABF95838.1| tRNA pseudouridine synthase
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113548527|dbj|BAF11970.1| Os03g0338600 [Oryza sativa
           Japonica Group]
          Length = 516

 Score =  306 bits (784), Expect = 7e-81
 Identities = 150/238 (63%), Positives = 190/238 (79%), Gaps = 2/238 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LE+AI+KAGGIL+SN+GKLQK
Sbjct: 65  RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQK 124

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI L+N++NSNLP+NV+VFS+LP+
Sbjct: 125 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALSNFINSNLPDNVRVFSVLPA 184

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD RREC  R Y YLLPAEIIGI G CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 185 QRSFDVRRECLYREYLYLLPAEIIGIKGGCSSEEVMEHLSEFNSILKGFEGNHPFHNYTA 244

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEHEERAILS 891
           R+KYRK  +G+   +K +   ++++P+   +++SS D       D T S+H+E  + S
Sbjct: 245 RAKYRKVLAGRHRKVKGASSAVNSMPTEMSLDQSSSD-------DGTTSDHDEEDLNS 295


>ref|XP_004984444.1| PREDICTED: putative tRNA pseudouridine synthase-like [Setaria
           italica]
          Length = 519

 Score =  305 bits (781), Expect = 2e-80
 Identities = 157/246 (63%), Positives = 189/246 (76%), Gaps = 2/246 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LESAI+KAGGIL+SN+GKLQK
Sbjct: 69  RWESARKKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKAGGILESNYGKLQK 128

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI LA+++NSNLPNNV+VFSILP+
Sbjct: 129 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNVRVFSILPA 188

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD RREC  R Y YLLPAE IGI   CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 189 QRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGNHPFHNYTA 248

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEHEERAILSCN 897
           R+KYRK  +G    +K + L L ++ S  G+EE+S        ED T S+H+E   +S  
Sbjct: 249 RAKYRKVLAGSHRRVKGACLPLKSMSSETGMEENSS-------EDNTPSDHDEDLNISSM 301

Query: 898 TDEEEE 915
            D   E
Sbjct: 302 IDSGVE 307


>ref|XP_003561660.1| PREDICTED: putative tRNA pseudouridine synthase-like [Brachypodium
           distachyon]
          Length = 522

 Score =  302 bits (774), Expect = 1e-79
 Identities = 148/219 (67%), Positives = 179/219 (81%), Gaps = 2/219 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+RVGY+G++YRGLQKQR+    STIE+ LESAI+KAGGIL+SN+GKLQK
Sbjct: 70  RWESTRKKRVVLRVGYVGSEYRGLQKQRELSADSTIESVLESAIFKAGGILESNYGKLQK 129

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI LAN++NSNLPNN+KVFSILP+
Sbjct: 130 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGIALANFINSNLPNNIKVFSILPA 189

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD RREC  R Y YLLPAEIIGI   CSS+EV +HL EFNSILKGFEG  PFHNYT 
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEIIGIKSGCSSEEVEEHLIEFNSILKGFEGNHPFHNYTA 249

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVG 834
           R+KYRK  +G     K++   ++++PS   V++S  D G
Sbjct: 250 RAKYRKVLAGAHRRSKETSSTINSIPSELAVDQSPNDDG 288


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 377

 Score =  296 bits (758), Expect = 7e-78
 Identities = 146/232 (62%), Positives = 179/232 (77%), Gaps = 2/232 (0%)
 Frame = +1

Query: 181 KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 360
           ++WE F KKKVV+RVGY+GTDYRGLQKQ D H LSTIEAELE AI+KAGGILDSN+G L 
Sbjct: 46  QKWEPFRKKKVVLRVGYVGTDYRGLQKQEDEHSLSTIEAELECAIFKAGGILDSNYGNLH 105

Query: 361 KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 540
           KI W RSSRTDKGVHSLAT IS+KMEIP+ AWK+DP+GI LA  VN  LP+N+++FSILP
Sbjct: 106 KIAWARSSRTDKGVHSLATMISMKMEIPENAWKEDPNGIALAECVNYYLPDNIRIFSILP 165

Query: 541 SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 720
           SQKSFDPRREC+LR YSYLLPAEIIGI G+ +S E+  H+ +FN IL  FEGE PFHNYT
Sbjct: 166 SQKSFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEIDNHISDFNDILNAFEGEHPFHNYT 225

Query: 721 VRSKYRK--PPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEH 870
           +RSKYRK  P +      K++R   +   S  E+S G+  ++ +++    +H
Sbjct: 226 IRSKYRKQYPTAITGRVPKRARSSSERSTSESEKSDGE-EDYEIDEINIEDH 276


>ref|XP_006651355.1| PREDICTED: putative tRNA pseudouridine synthase-like [Oryza
           brachyantha]
          Length = 518

 Score =  296 bits (757), Expect = 1e-77
 Identities = 147/238 (61%), Positives = 185/238 (77%), Gaps = 2/238 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+RVGY+GT+YRGLQKQR+    STIE+ LE+AI+K GGIL+SN+GKLQK
Sbjct: 67  RWESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKTGGILESNYGKLQK 126

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           +GW+RSSRTDKGVHSLAT ISLKMEIPD AW++DP GI L+N++NSNLP+NV+VFSILP+
Sbjct: 127 VGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLSNFINSNLPDNVRVFSILPA 186

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD R+EC  R Y YL+PAEIIGI   CSS EV +HL EFN ILKGFEG  PFHNYT 
Sbjct: 187 QRSFDVRKECLYRDYLYLIPAEIIGIKDGCSSDEVVEHLSEFNYILKGFEGNHPFHNYTA 246

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEHEERAILS 891
           R+KYRK  +G+   +K++   ++++ S  G+E  S D       D T S+H+E  + S
Sbjct: 247 RAKYRKVLAGRHRKVKRASSAVNSMSSKMGMEGISSD-------DGTSSDHDEEDLNS 297


>gb|ACF83058.1| unknown [Zea mays] gi|414866704|tpg|DAA45261.1| TPA: hypothetical
           protein ZEAMMB73_241728 [Zea mays]
          Length = 516

 Score =  295 bits (754), Expect = 2e-77
 Identities = 149/233 (63%), Positives = 183/233 (78%), Gaps = 2/233 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+R+GY+GTDYRGLQKQ++    STIE+ LESAI+K+GGIL+SN+GKLQK
Sbjct: 70  RWESARKKRVVLRIGYVGTDYRGLQKQQELGVDSTIESVLESAIFKSGGILESNYGKLQK 129

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           IGW+RSSRTDKGVHSLAT ISLKMEIPD AW+DDP GI LA+++NSNLP+NV+VFSILP+
Sbjct: 130 IGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD RREC  R Y YLLPAEIIGI  + SS+E+ +HL EFN ILKGFEG  PFHNYT 
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTA 249

Query: 724 RSKYRKPPSGKRNSMK--QSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEE 876
           R+KYRK  +G+    K   S LK  +  +G+ ESS        E++T  +H+E
Sbjct: 250 RAKYRKVLAGRHRRAKGASSALKSMSSDTGMAESSS-------EESTSPDHDE 295


>gb|EXC11333.1| Putative tRNA pseudouridine synthase [Morus notabilis]
          Length = 481

 Score =  294 bits (752), Expect = 4e-77
 Identities = 151/254 (59%), Positives = 183/254 (72%), Gaps = 8/254 (3%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WE F KKKVVMRVGY+GTDYRGLQ QRD H LSTIE ELE+AI+KAGGI DSNFG LQK
Sbjct: 57  KWEPFRKKKVVMRVGYVGTDYRGLQMQRDEHSLSTIEKELETAIFKAGGIRDSNFGDLQK 116

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           I W RSSRTDKGVHSLATTISLKMEIP+ AWKDDP GI LA+ +N+ LP N+KVFSILPS
Sbjct: 117 IAWARSSRTDKGVHSLATTISLKMEIPEYAWKDDPCGIALASCINAYLPRNIKVFSILPS 176

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           QKSFDPRREC+LR YSYLLPA+++GI  N ++ ++  H+ +FN IL  FEG+ PFHNYT+
Sbjct: 177 QKSFDPRRECNLRKYSYLLPADVVGIKSNFTTDKIDFHISDFNEILNTFEGDHPFHNYTM 236

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVG------NFHVEDATQSEHE--ER 879
           RSKYRK    K++      L+     S  EES  + G      NF +   + S +E  ++
Sbjct: 237 RSKYRKQFPAKKSYKNGCALRRQR--SSEEESEFESGASDGEENFELNGLSTSNYEGLDQ 294

Query: 880 AILSCNTDEEEEVD 921
              + N   +  VD
Sbjct: 295 NFSASNVSHKNVVD 308


>ref|XP_002467892.1| hypothetical protein SORBIDRAFT_01g035980 [Sorghum bicolor]
           gi|241921746|gb|EER94890.1| hypothetical protein
           SORBIDRAFT_01g035980 [Sorghum bicolor]
          Length = 520

 Score =  293 bits (751), Expect = 5e-77
 Identities = 149/247 (60%), Positives = 187/247 (75%), Gaps = 2/247 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           RWES  KK+VV+R+GYIGT+YRGLQKQR+    STIE+ LESAI+K+GGIL+SN+GKLQK
Sbjct: 70  RWESARKKRVVLRIGYIGTEYRGLQKQRELGVDSTIESVLESAIFKSGGILESNYGKLQK 129

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           +GW+RSSRTDKGVHSLAT ISLKMEIPD AW+DDP GI LA+++NSNLP+NV+VFSILP+
Sbjct: 130 VGWERSSRTDKGVHSLATMISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPA 189

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFD RREC  R Y YLLPAE+IGI    S +E+ +HL EFNSILKGFEG  PFHNYT 
Sbjct: 190 QRSFDVRRECLYREYFYLLPAEVIGIKDGYSPEEIQEHLSEFNSILKGFEGNHPFHNYTA 249

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPS--GVEESSGDVGNFHVEDATQSEHEERAILSCN 897
           R+KYRK  +G+    K + L L ++ S  G+ ESS       +E  +  + E+  I S +
Sbjct: 250 RAKYRKVLAGRHPRAKGASLTLKSMSSEMGMAESSS------LESTSSDDDEDLNISSID 303

Query: 898 TDEEEEV 918
           +   E +
Sbjct: 304 SGASENI 310


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  292 bits (747), Expect = 1e-76
 Identities = 149/237 (62%), Positives = 177/237 (74%), Gaps = 5/237 (2%)
 Frame = +1

Query: 181 KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 360
           ++WESF KKKVVMRVGY+GT+YRGLQ QRD   LSTIE ELE+A++KAGGI DSN+G L 
Sbjct: 55  QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114

Query: 361 KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 540
           KIGW RSSRTDKGVHSLAT ISLKMEIP  AWK+DP+GI LANYVN +LPNN+KVFSILP
Sbjct: 115 KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174

Query: 541 SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 720
           SQ+SFD RREC LR YSYLLPAEIIGI  N S+ E+  H+ EFN IL  FEGE PF NYT
Sbjct: 175 SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234

Query: 721 VRSKYRKPPSGKRNS-----MKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEE 876
           +RSKYRK    K++       ++++   +   S  E S G+  N  V     S+++E
Sbjct: 235 IRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-ENSGVNGVISSDYDE 290


>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
           [Citrus sinensis]
          Length = 539

 Score =  291 bits (746), Expect = 2e-76
 Identities = 144/243 (59%), Positives = 177/243 (72%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WE   KKKV +RVGY+GTDYRGLQ QRD H LSTIE ELE+A++KAGGI +SN+G LQK
Sbjct: 71  KWEPVRKKKVALRVGYVGTDYRGLQMQRDEHSLSTIEGELETAVFKAGGIRESNYGNLQK 130

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           I W RSSRTDKGVHSLAT I LKMEIP  AWKDDP GI LA  VN++LP N+KVFSILPS
Sbjct: 131 IAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPS 190

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+SFDPRREC+LR YSYLLPAE+IGI    ++ E+  H+ +FN+IL  FEGE PFHNYT 
Sbjct: 191 QRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTE 250

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEERAILSCNTD 903
           RSKYR+ P       K+++   D + S VEES G+   F   + +  E +       ++D
Sbjct: 251 RSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGEEDGFSKVEESDGEEDLGIGGEISSD 310

Query: 904 EEE 912
           +E+
Sbjct: 311 DEK 313


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
           lycopersicum]
          Length = 496

 Score =  291 bits (746), Expect = 2e-76
 Identities = 146/214 (68%), Positives = 165/214 (77%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WE F KKKVVMRVGY+G+DYRGLQ QRD H LSTIE ELE AI+KAGGI +SNFG L K
Sbjct: 39  KWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYK 98

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           IGW RSSRTDKGVHSLAT ISLKMEIP  AW+DDP+GI LAN VNS+LP N++VFSILPS
Sbjct: 99  IGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPS 158

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           +K FD RREC+ R YSYL+PAEIIGI  + +S E+  H+  FN IL  FEGE PFHNYT+
Sbjct: 159 KKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTI 218

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSG 825
           RSKYRK  S  RN +K   L     PS  EE SG
Sbjct: 219 RSKYRK-QSPARNLLKNDSLLKKGRPSSEEEISG 251


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  291 bits (746), Expect = 2e-76
 Identities = 148/237 (62%), Positives = 177/237 (74%), Gaps = 5/237 (2%)
 Frame = +1

Query: 181 KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 360
           ++WESF KKKVVMRVGY+GT+YRGLQ QRD   LSTIE ELE+A++KAGGI DSN+G L 
Sbjct: 55  QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114

Query: 361 KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 540
           KIGW RSSRTDKGVHSLAT ISLKMEIP  AWK+DP+GI LANYVN +LPNN+KVFSILP
Sbjct: 115 KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174

Query: 541 SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 720
           SQ+SFD RREC LR YSYLLPAEIIGI  N S+ E+  H+ EFN IL  FEGE PF NYT
Sbjct: 175 SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234

Query: 721 VRSKYRKPPSGKRNS-----MKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEE 876
           +RSKYRK    K++       ++++   +   S  E S G+  N  +     S+++E
Sbjct: 235 IRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-ENSGINGVISSDYDE 290


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  291 bits (745), Expect = 2e-76
 Identities = 148/242 (61%), Positives = 175/242 (72%), Gaps = 7/242 (2%)
 Frame = +1

Query: 181 KRWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQ 360
           ++WESF KKKVVMRVGY+GT+YRGLQ QRD   LSTIE ELE+A++KAGGI DSN+G L 
Sbjct: 55  QKWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLH 114

Query: 361 KIGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILP 540
           KIGW RSSRTDKGVHSLAT ISLKMEIP  AWK+DP+GI LANYVN +LPNN+KVFSILP
Sbjct: 115 KIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILP 174

Query: 541 SQKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYT 720
           SQ+SFD RREC LR YSYLLPAEIIGI  N S+ E+  H+ EFN IL  FEGE PF NYT
Sbjct: 175 SQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYT 234

Query: 721 VRSKYRK-------PPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEER 879
           +RSKYRK       P +G      +S +       G  ++S +  +F       S + E+
Sbjct: 235 IRSKYRKQFPAKQSPGNGGVFRRAKSSVISSDYDEGENQNSSESTSFVEHPVGSSNNNEK 294

Query: 880 AI 885
            +
Sbjct: 295 GL 296


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
           [Solanum tuberosum]
          Length = 487

 Score =  290 bits (743), Expect = 4e-76
 Identities = 145/214 (67%), Positives = 165/214 (77%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +W+ F KKKVVMRVGY+G+DYRGLQ QRD H LSTIE ELE AI+KAGGI DSNFG L K
Sbjct: 43  KWDPFIKKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYK 102

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           IGW RSSRTDKGVHSLAT ISLKMEIP  AW+DDP+GI LAN VNS+LP N++VFSILPS
Sbjct: 103 IGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPS 162

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           +K FD RREC+ R YSYL+PAEIIGI  + +S E+  H+  FN IL  FEGE PFHNYT+
Sbjct: 163 KKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTI 222

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSG 825
           RSKYRK  S  RN +K   L     PS  +E SG
Sbjct: 223 RSKYRK-QSPARNLLKNESLLKKGRPSSEKEISG 255


>ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutrema salsugineum]
           gi|557111301|gb|ESQ51585.1| hypothetical protein
           EUTSA_v10016529mg [Eutrema salsugineum]
          Length = 512

 Score =  284 bits (727), Expect = 3e-74
 Identities = 144/236 (61%), Positives = 171/236 (72%), Gaps = 5/236 (2%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WES+ KKKVV+R+GY+GTDYRGLQ QRD   L TIE ELE AIYKAGGILDSNFG L K
Sbjct: 58  KWESYRKKKVVIRIGYVGTDYRGLQIQRDDPALKTIEGELEVAIYKAGGILDSNFGDLHK 117

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           IGW RSSRTDKGVHSLATTISLKMEIPD AWKDDP G VLA  ++ +LP N++VFS+LPS
Sbjct: 118 IGWARSSRTDKGVHSLATTISLKMEIPDTAWKDDPQGTVLAKCISKHLPENIRVFSVLPS 177

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           Q+ FDPRREC+LRMYSYLLP  +IG+  + +S E+  H+ +FN ILK FEG+ PFHNYT 
Sbjct: 178 QRRFDPRRECTLRMYSYLLPVGVIGVKNSFTSDEIDDHISDFNEILKEFEGDYPFHNYTQ 237

Query: 724 RSKYRKPPSGK---RNSMKQSRLKLDTLPSGVEESS--GDVGNFHVEDATQSEHEE 876
           RSKYRK    K   RN     + K +   S   E +  G+      E+A    +EE
Sbjct: 238 RSKYRKKAKQKLTQRNGRPPKKPKFEASVSEYTEENCRGNEEEVEGEEADGESNEE 293


>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 507

 Score =  283 bits (724), Expect = 6e-74
 Identities = 148/238 (62%), Positives = 178/238 (74%), Gaps = 5/238 (2%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WE F KKKVVMRVGY+GT+YRGLQ QRD H LSTIE ELE+AI+KAGGI DSN+G L K
Sbjct: 50  KWEPFRKKKVVMRVGYVGTNYRGLQVQRDEHQLSTIENELETAIFKAGGIRDSNYGDLHK 109

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           I W RSSRTDKGVHSLAT I+LKMEIP+ AWK+DP+GI LA  VNS LP+++KVFSILPS
Sbjct: 110 IAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSILPS 169

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           QKSFDPRREC+LR YSYLLPAEIIGI  + S  E+  H+ +FNSIL  FEGE PFHNYT 
Sbjct: 170 QKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNYTQ 229

Query: 724 RSKYRK---PPSGKRNSM--KQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEERA 882
           R+KYR+   P    RN    K +    ++  S +EES  +  +  +E+ T    EE++
Sbjct: 230 RAKYRRQIPPRQTARNGRVPKGAEAHDESSTSELEESDVE-EDPRIEETTTLNSEEKS 286


>gb|ESW14066.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
          Length = 512

 Score =  281 bits (719), Expect = 2e-73
 Identities = 147/237 (62%), Positives = 171/237 (72%), Gaps = 6/237 (2%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WE F KKKVVMRVGY+GTD+RGLQ QRD H LSTIE ELE+AI+ AGG+ DSNFG L K
Sbjct: 63  KWEPFLKKKVVMRVGYVGTDFRGLQIQRDEHTLSTIEKELETAIFTAGGMRDSNFGDLNK 122

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           + W RSSRTDKGVHSLAT IS KMEIP+ AWK D  GI LAN +NS LP  ++VFSILPS
Sbjct: 123 VKWGRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIALANRINSYLPYTIRVFSILPS 182

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
            K FDPRREC+LR YSYLLPA+IIGI  + S  E+  H+ EFNSIL  FEGE PFHNYTV
Sbjct: 183 TKRFDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHISEFNSILNVFEGEHPFHNYTV 242

Query: 724 RSKYRKPPSGKRNS---MKQSRLKLDTLPSGVEESSGDVGNFHVED---ATQSEHEE 876
           RSKYRK    +++S   +   RL   +L SG E  S D  ++   D    T S+ EE
Sbjct: 243 RSKYRKKYQVRQSSGSDVMSDRLGSSSLASGFESESDDSDDYDFVDGSPTTLSDKEE 299


>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
           gi|550325882|gb|EEE95884.2| hypothetical protein
           POPTR_0013s15030g [Populus trichocarpa]
          Length = 505

 Score =  280 bits (717), Expect = 4e-73
 Identities = 138/225 (61%), Positives = 171/225 (76%), Gaps = 1/225 (0%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WES  KKKV +RVGY+GTDYRGLQKQ D H L TIE ELE AIY+AGGI +SN+G L K
Sbjct: 69  KWESIRKKKVALRVGYVGTDYRGLQKQHDQHSLLTIEGELERAIYEAGGIRESNYGNLNK 128

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           I W RSSRTDKGVHSLATTI++KMEIP+ AWKDD  G+VLA +VNS LP++++V SILP+
Sbjct: 129 ISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDSIRVLSILPA 188

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
           QKSFDPRREC +R YSYLLPAE+IGI  + S  E+  H+ +FN+IL  FEG+ PFHNYTV
Sbjct: 189 QKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEGDHPFHNYTV 248

Query: 724 RSKY-RKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDA 855
           RSKY RK P+   +  K++R    T  SG EE+  ++    +E +
Sbjct: 249 RSKYRRKYPTKNGHVSKRARSSWGTSASGSEENHVELSQNSLESS 293


>ref|XP_006294040.1| hypothetical protein CARUB_v10023036mg [Capsella rubella]
           gi|482562748|gb|EOA26938.1| hypothetical protein
           CARUB_v10023036mg [Capsella rubella]
          Length = 508

 Score =  280 bits (717), Expect = 4e-73
 Identities = 137/234 (58%), Positives = 171/234 (73%)
 Frame = +1

Query: 184 RWESFCKKKVVMRVGYIGTDYRGLQKQRDAHDLSTIEAELESAIYKAGGILDSNFGKLQK 363
           +WES+ KKKVV+R+GY+GTDYRGLQ QRD   + TIE ELE AIYKAGGI DSN+G L K
Sbjct: 57  KWESYRKKKVVIRIGYVGTDYRGLQIQRDDPAIKTIEGELEVAIYKAGGIRDSNYGDLHK 116

Query: 364 IGWKRSSRTDKGVHSLATTISLKMEIPDLAWKDDPSGIVLANYVNSNLPNNVKVFSILPS 543
           IGW RSSRTDKGVHSLAT+ISLKMEIP+ AWKDDP GIVLA  ++ +LP N++VFS+LPS
Sbjct: 117 IGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGIVLAKCISKHLPENIRVFSVLPS 176

Query: 544 QKSFDPRRECSLRMYSYLLPAEIIGIGGNCSSKEVTKHLEEFNSILKGFEGERPFHNYTV 723
            + FDPRREC+LR YSYLLP ++IGI  N +S E+  H+ +FN ILK FEGE PFHNYT 
Sbjct: 177 NRRFDPRRECTLRKYSYLLPVDVIGIKSNFTSDEIDYHITDFNEILKEFEGEYPFHNYTQ 236

Query: 724 RSKYRKPPSGKRNSMKQSRLKLDTLPSGVEESSGDVGNFHVEDATQSEHEERAI 885
           RS+YR+    K   +KQ   +    P  V+ S  +    +  +  + E EE+ +
Sbjct: 237 RSRYRRKSEQK---LKQRNGRPPKEPKSVKASETEFAEENHREIEEEEEEEKEV 287