BLASTX nr result
ID: Zingiber24_contig00026539
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026539
(264 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_005289962.1| ATPase AAA [Corynebacterium genitalium] gi|3... 59 5e-07
ref|WP_007077613.1| ATPase AAA [Aeromicrobium marinum] gi|311313... 58 2e-06
ref|WP_019001301.1| hypothetical protein [Succinimonas amylolytica] 57 3e-06
ref|YP_002785087.1| recombination factor protein RarA [Deinococc... 57 3e-06
ref|NP_939704.1| recombination factor protein RarA [Corynebacter... 57 3e-06
ref|YP_005140570.1| recombination factor protein RarA [Corynebac... 57 3e-06
ref|YP_005138301.1| recombination factor protein RarA [Corynebac... 57 3e-06
ref|YP_005127756.1| recombination factor protein RarA [Corynebac... 57 3e-06
ref|YP_005125545.1| recombination factor protein RarA [Corynebac... 57 3e-06
ref|YP_005133792.1| recombination factor protein RarA [Corynebac... 57 3e-06
ref|WP_003851684.1| ATPase AAA [Corynebacterium diphtheriae] gi|... 56 4e-06
ref|WP_018582058.1| ATPase AAA [Corynebacterium pilosum] 56 6e-06
ref|YP_007182164.1| AAA ATPase [Deinococcus peraridilitoris DSM ... 55 7e-06
ref|YP_006261488.1| AAA ATPase [Deinococcus gobiensis I-0] gi|50... 55 7e-06
ref|YP_004170349.1| AAA ATPase [Deinococcus maricopensis DSM 212... 55 7e-06
ref|WP_021195594.1| ATPase AAA [Ralstonia sp. AU12-08] gi|528185... 55 1e-05
ref|NP_295621.1| recombination factor protein RarA [Deinococcus ... 55 1e-05
ref|YP_002982092.1| recombination factor protein RarA [Ralstonia... 55 1e-05
>ref|WP_005289962.1| ATPase AAA [Corynebacterium genitalium] gi|300532790|gb|EFK53851.1|
recombination factor protein RarA [Corynebacterium
genitalium ATCC 33030]
Length = 448
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS +SSGV ++RE +DGA R + G R VLF+DE+HRFSK QQD
Sbjct: 95 FVGLSALSSGVKQVREVLDGARRNLARGQRTVLFIDEVHRFSKTQQD 141
>ref|WP_007077613.1| ATPase AAA [Aeromicrobium marinum] gi|311313967|gb|EFQ83875.1|
ATPase, AAA family [Aeromicrobium marinum DSM 15272]
Length = 455
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV +S VS+GV E+R+ I GA R +NG VLFVDE+HRFSK QQD
Sbjct: 97 FVEVSAVSAGVKEVRDVIAGARRALTNGVETVLFVDEVHRFSKSQQD 143
>ref|WP_019001301.1| hypothetical protein [Succinimonas amylolytica]
Length = 487
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -2
Query: 134 LSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
LS V+SGV E+REAI A R NG R VLFVDE+HRF+K QQD
Sbjct: 92 LSAVTSGVKEIREAISEASRNLENGFRTVLFVDEVHRFNKSQQD 135
>ref|YP_002785087.1| recombination factor protein RarA [Deinococcus deserti VCD115]
gi|502013134|ref|WP_012692456.1| ATPase AAA [Deinococcus
deserti] gi|226317337|gb|ACO45333.1| putative
DNA-dependent ATPase [Deinococcus deserti VCD115]
Length = 451
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A F+ LS VS+GV ++REA+ A+R + G R +LF+DEIHRF+K QQD
Sbjct: 87 AHFIALSAVSAGVKDVREAVTEAERLRARGTRTILFLDEIHRFNKAQQD 135
>ref|NP_939704.1| recombination factor protein RarA [Corynebacterium diphtheriae NCTC
13129] gi|499237459|ref|WP_010934999.1| ATPase AAA
[Corynebacterium diphtheriae]
gi|38200198|emb|CAE49879.1| Conserved hypothetical
protein (putative ATP/GTP binding protein)
[Corynebacterium diphtheriae]
Length = 456
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 98 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQD 144
>ref|YP_005140570.1| recombination factor protein RarA [Corynebacterium diphtheriae
HC04] gi|504075383|ref|WP_014309377.1| ATPase AAA
[Corynebacterium diphtheriae]
gi|372115194|gb|AEX81252.1| recombination factor protein
RarA [Corynebacterium diphtheriae HC04]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 94 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQD 140
>ref|YP_005138301.1| recombination factor protein RarA [Corynebacterium diphtheriae
HC03] gi|376257235|ref|YP_005145126.1| recombination
factor protein RarA [Corynebacterium diphtheriae VA01]
gi|376293364|ref|YP_005165038.1| recombination factor
protein RarA [Corynebacterium diphtheriae HC02]
gi|504074369|ref|WP_014308363.1| ATPase AAA
[Corynebacterium diphtheriae]
gi|372110687|gb|AEX76747.1| recombination factor protein
RarA [Corynebacterium diphtheriae HC02]
gi|372112924|gb|AEX78983.1| recombination factor protein
RarA [Corynebacterium diphtheriae HC03]
gi|372119752|gb|AEX83486.1| recombination factor protein
RarA [Corynebacterium diphtheriae VA01]
gi|535922689|gb|ERA53115.1| recombination factor protein
RarA [Corynebacterium diphtheriae str. Aberdeen]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 94 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQD 140
>ref|YP_005127756.1| recombination factor protein RarA [Corynebacterium diphtheriae INCA
402] gi|504069470|ref|WP_014303464.1| ATPase AAA
[Corynebacterium diphtheriae]
gi|371582888|gb|AEX46554.1| recombination factor protein
RarA [Corynebacterium diphtheriae INCA 402]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 94 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQD 140
>ref|YP_005125545.1| recombination factor protein RarA [Corynebacterium diphtheriae 241]
gi|376245836|ref|YP_005136075.1| recombination factor
protein RarA [Corynebacterium diphtheriae HC01]
gi|504067970|ref|WP_014301964.1| ATPase AAA
[Corynebacterium diphtheriae]
gi|371580676|gb|AEX44343.1| recombination factor protein
RarA [Corynebacterium diphtheriae 241]
gi|372108466|gb|AEX74527.1| recombination factor protein
RarA [Corynebacterium diphtheriae HC01]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 94 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQD 140
>ref|YP_005133792.1| recombination factor protein RarA [Corynebacterium diphtheriae CDCE
8392] gi|376254427|ref|YP_005142886.1| recombination
factor protein RarA [Corynebacterium diphtheriae PW8]
gi|376284850|ref|YP_005158060.1| recombination factor
protein RarA [Corynebacterium diphtheriae 31A]
gi|376287850|ref|YP_005160416.1| recombination factor
protein RarA [Corynebacterium diphtheriae BH8]
gi|376290545|ref|YP_005162792.1| recombination factor
protein RarA [Corynebacterium diphtheriae C7 (beta)]
gi|504072951|ref|WP_014306945.1| ATPase AAA
[Corynebacterium diphtheriae]
gi|371578365|gb|AEX42033.1| recombination factor protein
RarA [Corynebacterium diphtheriae 31A]
gi|371585184|gb|AEX48849.1| recombination factor protein
RarA [Corynebacterium diphtheriae BH8]
gi|372103941|gb|AEX67538.1| recombination factor protein
RarA [Corynebacterium diphtheriae C7 (beta)]
gi|372106182|gb|AEX72244.1| recombination factor protein
RarA [Corynebacterium diphtheriae CDCE 8392]
gi|372117511|gb|AEX69981.1| recombination factor protein
RarA [Corynebacterium diphtheriae PW8]
gi|535925126|gb|ERA55374.1| recombination factor protein
RarA [Corynebacterium diphtheriae DSM 43988]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 94 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQD 140
>ref|WP_003851684.1| ATPase AAA [Corynebacterium diphtheriae]
gi|387982607|gb|EIK56108.1| recombination factor protein
RarA [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
Length = 452
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV E+RE ID A R +G R VLF+DE+HRFSK QQD
Sbjct: 94 FVGLSALNSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKRQQD 140
>ref|WP_018582058.1| ATPase AAA [Corynebacterium pilosum]
Length = 454
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = -2
Query: 143 FVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
FV LS ++SGV ++R+ I+GA R +G R VLF+DE+HRFSK QQD
Sbjct: 95 FVGLSALTSGVKQVRQVIEGATRDLRSGRRTVLFIDEVHRFSKTQQD 141
>ref|YP_007182164.1| AAA ATPase [Deinococcus peraridilitoris DSM 19664]
gi|505049598|ref|WP_015236700.1| AAA ATPase [Deinococcus
peraridilitoris] gi|429131383|gb|AFZ68398.1| AAA ATPase
[Deinococcus peraridilitoris DSM 19664]
Length = 427
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A F++LS V++GV ++R A+D A+R + G R +LF+DEIHRF+K QQD
Sbjct: 70 AHFISLSAVTAGVKDVRAAVDEAERRVARGERTILFLDEIHRFNKAQQD 118
>ref|YP_006261488.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|504498411|ref|WP_014685513.1| ATPase AAA [Deinococcus
gobiensis] gi|380000840|gb|AFD26030.1| AAA ATPase,
central region [Deinococcus gobiensis I-0]
Length = 441
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A FV LS VS+GV ++REA+ A+R G + VLF+DEIHRF+K QQD
Sbjct: 74 AHFVALSAVSAGVKDVREAVAEAERVRGRGQKTVLFLDEIHRFNKAQQD 122
>ref|YP_004170349.1| AAA ATPase [Deinococcus maricopensis DSM 21211]
gi|503321528|ref|WP_013556189.1| ATPase AAA [Deinococcus
maricopensis] gi|319754927|gb|ADV66684.1| AAA ATPase
central domain protein [Deinococcus maricopensis DSM
21211]
Length = 438
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A F+ LS VS+GV ++REA+ A+R G R +LF+DEIHRF+K QQD
Sbjct: 70 AHFIALSAVSAGVKDIREAVGEAERERGRGRRTLLFLDEIHRFNKAQQD 118
>ref|WP_021195594.1| ATPase AAA [Ralstonia sp. AU12-08] gi|528185917|gb|EPX96841.1|
ATPase AAA [Ralstonia sp. AU12-08]
Length = 435
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A F+ LS V SGV ++REA++ A++ +NG R ++FVDE+HRF+K QQD
Sbjct: 63 AEFIALSAVLSGVKDIREAVERAEQFRANGRRTLVFVDEVHRFNKSQQD 111
>ref|NP_295621.1| recombination factor protein RarA [Deinococcus radiodurans R1]
gi|499190993|ref|WP_010888533.1| ATPase AAA [Deinococcus
radiodurans] gi|6459682|gb|AAF11452.1|AE002029_1
conserved hypothetical protein [Deinococcus radiodurans
R1]
Length = 434
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A F+ LS VS+GV ++R+A+ A+R + G R VLF+DEIHRF+K QQD
Sbjct: 70 AHFIALSAVSAGVKDVRDAVAEAEREQARGRRTVLFLDEIHRFNKAQQD 118
>ref|YP_002982092.1| recombination factor protein RarA [Ralstonia pickettii 12D]
gi|502319002|ref|WP_012762525.1| ATPase AAA [Ralstonia
pickettii] gi|240865759|gb|ACS63420.1| AAA ATPase
central domain protein [Ralstonia pickettii 12D]
Length = 449
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2
Query: 149 AFFVTLSVVSSGV*ELREAIDGADRT*SNGCRIVLFVDEIHRFSKFQQD 3
A F+ LS V SGV ++REA++ A++ +NG R ++FVDE+HRF+K QQD
Sbjct: 77 AEFIALSAVLSGVKDIREAVERAEQFRANGRRTLVFVDEVHRFNKSQQD 125