BLASTX nr result
ID: Zingiber24_contig00026345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026345
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containin... 97 3e-18
ref|XP_003567835.1| PREDICTED: zinc finger CCCH domain-containin... 96 6e-18
gb|EEE60912.1| hypothetical protein OsJ_14616 [Oryza sativa Japo... 96 6e-18
sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 96 6e-18
emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group] 96 6e-18
ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group] g... 96 6e-18
emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group] 96 6e-18
dbj|BAJ91502.1| predicted protein [Hordeum vulgare subsp. vulgare] 86 5e-15
gb|EMT09223.1| Zinc finger CCCH domain-containing protein 27 [Ae... 85 1e-14
gb|EMS47346.1| Zinc finger CCCH domain-containing protein 27 [Tr... 85 1e-14
ref|XP_002447715.1| hypothetical protein SORBIDRAFT_06g014350 [S... 78 1e-12
ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containin... 73 3e-11
ref|XP_004975433.1| PREDICTED: zinc finger CCCH domain-containin... 73 4e-11
ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Popu... 72 8e-11
ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 71 2e-10
gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus pe... 70 3e-10
ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containin... 70 4e-10
ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containin... 70 4e-10
ref|XP_004304651.1| PREDICTED: zinc finger CCCH domain-containin... 68 1e-09
>ref|XP_006652220.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Oryza brachyantha]
Length = 929
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/101 (49%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q + RFN LD +DF SQ+ SQG TH +LF G +P SAQN SWG Y
Sbjct: 133 RGRGRNGAPWTQHEPRFNTLDMIDFASQMASQGPPTHPNLFMGAALPGGGSAQNGSWGPY 192
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + P I+PL +LGMP QRCR
Sbjct: 193 GFMPGMPNGMLDPIHPLGIQGPIQPAISPLIDLGMPRQRCR 233
>ref|XP_003567835.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Brachypodium distachyon]
Length = 923
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q D RFN LD +DF SQ+ SQG TH SLF +P++ S QN SWG Y
Sbjct: 134 RGRGRNGAPWTQHDPRFNTLDMIDFASQMASQGPPTHPSLFMRAPLPSSGSGQNGSWGPY 193
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M +R+ P I+PL +LGMP QRCR
Sbjct: 194 GFMPGMPSRMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCR 234
>gb|EEE60912.1| hypothetical protein OsJ_14616 [Oryza sativa Japonica Group]
Length = 1068
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q + RFN L+ +DF SQ+ SQG TH SLF G +P+ SAQN SWG Y
Sbjct: 144 RGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPY 203
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + P I+PL +LGMP QRCR
Sbjct: 204 GFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCR 244
>sp|Q0JDM0.2|C3H27_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 27;
Short=OsC3H27 gi|215767208|dbj|BAG99436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 903
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q + RFN L+ +DF SQ+ SQG TH SLF G +P+ SAQN SWG Y
Sbjct: 132 RGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPY 191
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + P I+PL +LGMP QRCR
Sbjct: 192 GFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCR 232
>emb|CAH66461.1| H0718E12.5 [Oryza sativa Indica Group]
Length = 904
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q + RFN L+ +DF SQ+ SQG TH SLF G +P+ SAQN SWG Y
Sbjct: 132 RGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPY 191
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + P I+PL +LGMP QRCR
Sbjct: 192 GFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCR 232
>ref|NP_001052653.1| Os04g0394300 [Oryza sativa Japonica Group]
gi|113564224|dbj|BAF14567.1| Os04g0394300, partial
[Oryza sativa Japonica Group]
Length = 917
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q + RFN L+ +DF SQ+ SQG TH SLF G +P+ SAQN SWG Y
Sbjct: 146 RGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPY 205
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + P I+PL +LGMP QRCR
Sbjct: 206 GFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCR 246
>emb|CAD40551.1| OSJNBa0072K14.6 [Oryza sativa Japonica Group]
Length = 915
Score = 95.5 bits (236), Expect = 6e-18
Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q + RFN L+ +DF SQ+ SQG TH SLF G +P+ SAQN SWG Y
Sbjct: 144 RGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPY 203
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + P I+PL +LGMP QRCR
Sbjct: 204 GFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCR 244
>dbj|BAJ91502.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/101 (46%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W D RFN LD +DF SQ+ SQG TH SLF G +P+ AQN WG Y
Sbjct: 137 RGRGRNGAPWTHHDPRFNTLDMIDFASQMASQGPATHPSLFMGPPLPSGGGAQNGPWGPY 196
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + PL +LGMP QRCR
Sbjct: 197 GFMPGMPNGMMDPIHPLGMQGPIQ---PPLIDLGMPRQRCR 234
>gb|EMT09223.1| Zinc finger CCCH domain-containing protein 27 [Aegilops tauschii]
Length = 948
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W D RFN LD +DF SQ+ SQG TH +LF G +P+ AQN WG Y
Sbjct: 137 RGRGRNGAPWTHHDPRFNTLDMIDFASQMASQGPPTHPNLFMGPPLPSGGGAQNGPWGPY 196
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + PL +LGMP QRCR
Sbjct: 197 GFMPGMPNGMMDPIHPLGMQGPIQ---PPLIDLGMPRQRCR 234
>gb|EMS47346.1| Zinc finger CCCH domain-containing protein 27 [Triticum urartu]
Length = 926
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W D RFN LD +DF SQ+ SQG TH +LF G +P+ AQN WG Y
Sbjct: 137 RGRGRNGAPWTHHDPRFNTLDMIDFASQMASQGPPTHPNLFMGPPLPSGGGAQNGPWGPY 196
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M N + PL +LGMP QRCR
Sbjct: 197 GFMPGMPNGMMDPIHPLGMQGPIQ---PPLIDLGMPRQRCR 234
>ref|XP_002447715.1| hypothetical protein SORBIDRAFT_06g014350 [Sorghum bicolor]
gi|241938898|gb|EES12043.1| hypothetical protein
SORBIDRAFT_06g014350 [Sorghum bicolor]
Length = 918
Score = 77.8 bits (190), Expect = 1e-12
Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W D RFN LD +DF SQ+ SQG H SLF GT +P+ G Y
Sbjct: 139 RGRGRNSAPWTHHDPRFNSLDMMDFASQMASQGPPAHPSLFMGTALPS---------GPY 189
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M + I P+++PL +LGMP QRCR
Sbjct: 190 GFIPGMPHGILDPIHPLGMQGPIQPSVSPLIDLGMPRQRCR 230
>ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum lycopersicum]
Length = 877
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/100 (40%), Positives = 58/100 (58%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR++ +W Q+DSRF+ ++ SQ+ QG T L G G+ N A+AQ+SSW A+G
Sbjct: 120 RGRGRDLNAWGQRDSRFS---SVVIASQLFPQGSVTPGLLTGRGVENIANAQSSSWSAFG 176
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
V+ +SN P++ P N+G+P QRCR
Sbjct: 177 MVSGISNGGLDTLHSVGFQGTLRPSLNPTMNMGIPRQRCR 216
>ref|XP_004975433.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Setaria italica]
Length = 900
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGRN W Q D RFN LD +DF SQ+ QG H SLF G +P+ G Y
Sbjct: 137 RGRGRNGAPWTQHDPRFNTLDMMDFASQMAPQGPPAHPSLFMGAALPS---------GPY 187
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
GF+ M + I P ++PL +LG+P QRCR
Sbjct: 188 GFMPGMPHGILDPIHPLGMQGPIQPAVSPLIDLGLPRQRCR 228
>ref|XP_002324006.1| hypothetical protein POPTR_0017s10830g [Populus trichocarpa]
gi|222867008|gb|EEF04139.1| hypothetical protein
POPTR_0017s10830g [Populus trichocarpa]
Length = 964
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLF-GTGIPNAASAQNSSWGAY 125
RGRGR +SW+Q DSRF+P+D + SQ +H SLF G G+ N ++AQ++SW AY
Sbjct: 128 RGRGREPVSWSQHDSRFSPVD-------IASQMVHQGQSLFTGRGLANVSNAQSASWNAY 180
Query: 124 GFVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
G + N P +T N+G+P QRCR
Sbjct: 181 GLFPGIPNGGLDKLRPIGLQATLRPAVTSSLNMGIPQQRCR 221
>ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 924
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/100 (39%), Positives = 56/100 (56%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR++ +W Q+DSRF+ ++D SQ+ QG T G G+ N A+AQ+SSW A+G
Sbjct: 120 RGRGRDLNAWGQRDSRFS---SVDIASQLFPQGSVTPGQFTGRGVENVANAQSSSWSAFG 176
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
V +SN P++ N+G+P QRCR
Sbjct: 177 MVPGISNGGLDTLHSVGFQGTLRPSLNHTMNMGIPRQRCR 216
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/100 (38%), Positives = 54/100 (54%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR+ SWNQ+DSRF+ ++D SQ+V QG T G G+PN ++ QNSSW +G
Sbjct: 136 RGRGRDSGSWNQRDSRFS---SVDIASQMVQQGSITPGLFAGRGLPNVSNTQNSSWNTFG 192
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
+ + + P + N+G+P QRCR
Sbjct: 193 LIPGIPSGGLDTLHPIGLQGTLRPAVNSSLNIGIPRQRCR 232
>gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/100 (40%), Positives = 52/100 (52%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR+ SW Q+DSRFN D SQ+V QG G G+P+ +SAQN+SW A+G
Sbjct: 135 RGRGRDSGSWGQRDSRFNS----DIASQMVQQGSIPPNLFAGRGLPSVSSAQNASWNAFG 190
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
+ + N P I N+G+P QRCR
Sbjct: 191 LIPGIPNGAMDTLHSIGLQGTLRPPIHSSMNMGIPRQRCR 230
>ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Cucumis sativus]
Length = 800
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/100 (37%), Positives = 53/100 (53%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR+ +WNQ DSRF+P+D SQ+V G G G+P+ ++AQ + W A+G
Sbjct: 134 RGRGRDSGTWNQFDSRFSPVD---IASQIVHHGSFPPSLFAGRGLPSVSTAQTAPWNAFG 190
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
++ + N P I P N+G+P QRCR
Sbjct: 191 LISGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCR 230
>ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Cucumis sativus]
Length = 901
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/100 (37%), Positives = 53/100 (53%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR+ +WNQ DSRF+P+D SQ+V G G G+P+ ++AQ + W A+G
Sbjct: 134 RGRGRDSGTWNQFDSRFSPVD---IASQIVHHGSFPPSLFAGRGLPSVSTAQTAPWNAFG 190
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
++ + N P I P N+G+P QRCR
Sbjct: 191 LISGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCR 230
>ref|XP_004304651.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Fragaria vesca subsp. vesca]
Length = 929
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = -1
Query: 301 RGRGRNIISWNQQDSRFNPLDTLDFPSQVVSQGLHTHVSLFGTGIPNAASAQNSSWGAYG 122
RGRGR+ SW+Q+DSRF+ D SQ+V QG G G+PN ++ QN+SW A+G
Sbjct: 136 RGRGRDSASWSQRDSRFSS----DITSQLVQQGSLPPSMFGGRGLPNVSNPQNASWNAFG 191
Query: 121 FVNEMSNRIXXXXXXXXXXXXXXPTITPLFNLGMPHQRCR 2
+ + N P I NLG+P QRCR
Sbjct: 192 LLPGVPNGGLDTLHSIGLQGTLRPPIRSSLNLGIPRQRCR 231