BLASTX nr result

ID: Zingiber24_contig00026273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026273
         (647 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351931.1| PREDICTED: uncharacterized protein LOC102605...    60   7e-07

>ref|XP_006351931.1| PREDICTED: uncharacterized protein LOC102605876 [Solanum tuberosum]
          Length = 198

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 46/138 (33%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
 Frame = +3

Query: 168 VPFSWERRPGISKTXXXXXXXXXXXXXXXXXXXSH----------RKRSATSHRNRSATS 317
           VPFSWE  PGI K                    S           R R   S R  S T+
Sbjct: 49  VPFSWEHIPGIPKQQSSRKNSSSLSQLLPLPPPSRNPPNSSKKIQRLRDEFSPRKSSTTN 108

Query: 318 AG-DEDPFAVALAECAKRPPGPSIEELFTPRRAATATRQQPVSSSARSISDLLGLHAV-- 488
            G  +DPF  A  EC+K       E+     +  T +  + ++SSARS+SD  G   +  
Sbjct: 109 EGFKKDPFFAAFVECSKDHQEHH-EDFSDMWKNTTTSSSKVMNSSARSLSDKFGFMNMYA 167

Query: 489 SCKARCAVADSVVFLPRS 542
           SCK  C V++S+V+LPRS
Sbjct: 168 SCKRTCTVSESIVYLPRS 185


Top