BLASTX nr result
ID: Zingiber24_contig00026254
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026254
(200 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006651600.1| PREDICTED: uncharacterized protein LOC102714... 66 6e-09
ref|XP_003562280.1| PREDICTED: 50S ribosomal protein L25-like [B... 65 7e-09
gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indi... 62 6e-08
gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/... 62 6e-08
gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/... 62 6e-08
ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [S... 62 8e-08
gb|AFW68220.1| 5S rRNA binding protein [Zea mays] 61 1e-07
gb|AFW68219.1| hypothetical protein ZEAMMB73_040273, partial [Ze... 61 1e-07
ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG3... 61 1e-07
ref|XP_004982431.1| PREDICTED: uncharacterized protein LOC101756... 59 5e-07
ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus... 59 7e-07
ref|XP_006393883.1| hypothetical protein EUTSA_v10004830mg [Eutr... 56 4e-06
ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [C... 56 6e-06
>ref|XP_006651600.1| PREDICTED: uncharacterized protein LOC102714722, partial [Oryza
brachyantha]
Length = 184
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT + +++ +LLT D Q+RE+L +SP+F STP++LQVRA ST V+
Sbjct: 5 VPAVLLTLAGAGPGEGVAHRKLLTADRKQLREMLKQSPYFLSTPVRLQVRAGERSTAVVH 64
Query: 25 SGTVLPIQ 2
SGTVLPI+
Sbjct: 65 SGTVLPIK 72
>ref|XP_003562280.1| PREDICTED: 50S ribosomal protein L25-like [Brachypodium distachyon]
Length = 237
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT + +++ +LLTTD Q+ E+L +SP+F STP++LQVRA ST V+
Sbjct: 58 VPAVLLTLAGAGPGEGVAHRKLLTTDRKQLSEMLKQSPYFLSTPVRLQVRAGERSTAVVH 117
Query: 25 SGTVLPIQ 2
SGTVLPI+
Sbjct: 118 SGTVLPIK 125
>gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group]
Length = 239
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +L + +++ +LLT D Q+ EIL +SP+F STP++LQVRA ST V+
Sbjct: 60 VPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVH 119
Query: 25 SGTVLPIQ 2
SGTVLPI+
Sbjct: 120 SGTVLPIK 127
>gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
protein, expressed [Oryza sativa Japonica Group]
Length = 239
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +L + +++ +LLT D Q+ EIL +SP+F STP++LQVRA ST V+
Sbjct: 60 VPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVH 119
Query: 25 SGTVLPIQ 2
SGTVLPI+
Sbjct: 120 SGTVLPIK 127
>gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
protein, expressed [Oryza sativa Japonica Group]
Length = 182
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +L + +++ +LLT D Q+ EIL +SP+F STP++LQVRA ST V+
Sbjct: 60 VPAVLLALAGAGPGEGVAHRKLLTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVH 119
Query: 25 SGTVLPIQ 2
SGTVLPI+
Sbjct: 120 SGTVLPIK 127
>ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor]
gi|241918086|gb|EER91230.1| hypothetical protein
SORBIDRAFT_01g014640 [Sorghum bicolor]
Length = 240
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT + + I++ QLLT D Q+ E+L +SP+F STP++LQVRA S ++
Sbjct: 58 VPAVLLTLAGAAPGNGIAHRQLLTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAIVH 117
Query: 25 SGTVLPIQ 2
+GTVLPI+
Sbjct: 118 AGTVLPIK 125
>gb|AFW68220.1| 5S rRNA binding protein [Zea mays]
Length = 239
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT + + I++ LLT D Q+ E+L +SP+F STP++LQVRA S +L
Sbjct: 60 VPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAILH 119
Query: 25 SGTVLPIQ 2
+GTVLPI+
Sbjct: 120 AGTVLPIK 127
>gb|AFW68219.1| hypothetical protein ZEAMMB73_040273, partial [Zea mays]
Length = 201
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT + + I++ LLT D Q+ E+L +SP+F STP++LQVRA S +L
Sbjct: 60 VPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAILH 119
Query: 25 SGTVLPIQ 2
+GTVLPI+
Sbjct: 120 AGTVLPIK 127
>ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG38519.1| 5S rRNA binding
protein [Zea mays]
Length = 240
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT + + I++ LLT D Q+ E+L +SP+F STP++LQVRA S +L
Sbjct: 61 VPAVLLTLAGAAPGNGIAHRHLLTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAILH 120
Query: 25 SGTVLPIQ 2
+GTVLPI+
Sbjct: 121 AGTVLPIK 128
>ref|XP_004982431.1| PREDICTED: uncharacterized protein LOC101756068 [Setaria italica]
Length = 243
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = -2
Query: 199 IPAAVLTRRHGS--DDISNTQLLTTDENQIREILDRSPFFCSTPIKLQVRARPDSTVVLR 26
+PA +LT S + +++ +LLT + Q+ E++ +SP+F STP++LQVRA S V+
Sbjct: 55 VPAVLLTLAGASPGNGVAHRKLLTAERKQLVEMVKQSPYFLSTPVRLQVRAGERSNAVVH 114
Query: 25 SGTVLPIQ 2
SGTVLPI+
Sbjct: 115 SGTVLPIK 122
>ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis]
gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25,
putative [Ricinus communis]
Length = 253
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Frame = -2
Query: 199 IPAAV-----LTRRHGSDDISNTQLLTTDENQIREILD--RSPFFCSTPIKLQVRARPDS 41
IPA V L + S IS QLLTT+ QI+ IL PFFCST LQ+RA S
Sbjct: 51 IPAVVFSQSLLDKNPNSRSISRKQLLTTERKQIQSILTSVELPFFCSTTFNLQIRAGSGS 110
Query: 40 TVVLRSGTVLPIQ 2
+V++ SGT+LPI+
Sbjct: 111 SVLIESGTILPIK 123
>ref|XP_006393883.1| hypothetical protein EUTSA_v10004830mg [Eutrema salsugineum]
gi|557090522|gb|ESQ31169.1| hypothetical protein
EUTSA_v10004830mg [Eutrema salsugineum]
Length = 246
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -2
Query: 196 PAAVLTRRHGSDDISNTQLLTTDENQIREILDRS--PFFCSTPIKLQVRARPDSTVVLRS 23
P ++L +S QLLT D QI+ ILD PFFCST KLQ+RA S+ ++ S
Sbjct: 63 PQSLLGTDASKRGVSRKQLLTADRKQIKSILDSVGLPFFCSTTFKLQIRAGQGSSTLIES 122
Query: 22 GTVLPIQ 2
G VLP++
Sbjct: 123 GRVLPLK 129
>ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
gi|449515688|ref|XP_004164880.1| PREDICTED: 50S
ribosomal protein L25-like [Cucumis sativus]
Length = 258
Score = 55.8 bits (133), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Frame = -2
Query: 199 IPAAVLTRR-------HGSDDISNTQLLTTDENQIREILD--RSPFFCSTPIKLQVRARP 47
IPA V +++ HGS S LLTT+ QI IL PFFCST KLQ+RA
Sbjct: 59 IPAVVFSQQILEKNSVHGSP--SRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGS 116
Query: 46 DSTVVLRSGTVLPIQ 2
S+V+L SG++LPI+
Sbjct: 117 GSSVLLESGSILPIK 131