BLASTX nr result

ID: Zingiber24_contig00026221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026221
         (617 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580988.1| PREDICTED: uncharacterized protein LOC100834...    64   3e-08
ref|XP_004977697.1| PREDICTED: serine/arginine repetitive matrix...    59   1e-06
ref|XP_002447411.1| hypothetical protein SORBIDRAFT_06g000630 [S...    56   9e-06

>ref|XP_003580988.1| PREDICTED: uncharacterized protein LOC100834463 [Brachypodium
           distachyon]
          Length = 570

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 26/227 (11%)
 Frame = -3

Query: 612 RPPLQTLSCNVDLG---TRSLPESPRASTSAR----------AVDADR-RLSLQI----- 490
           R PL++LSCNV  G   +RSLP++PRASTS+            V  DR RLSLQ+     
Sbjct: 162 RQPLRSLSCNVGAGDARSRSLPDTPRASTSSAVHRAAAWEEDTVLVDRPRLSLQVLKESV 221

Query: 489 -NRLCQATYFDHSKSPKNKGHNLGKLYRDENKSPRNHHHSREMVKRVVKEIKLNETKARA 313
            +R  Q     +S + K K        +DE++      H+RE+V++  + +  N +K  +
Sbjct: 222 LDRAAQYMSMPNSPTKKKK--------KDESRRRDAKEHAREIVRQAKETVITNRSKTGS 273

Query: 312 SLTEKKPTPAAGEHHPKIEPSKPKVAVN----VVLNKCNKADS--ERFTGRIKKQHSKSG 151
            L   KPT A  +     E + P VAV     V   KC +     ERF  R  ++   +G
Sbjct: 274 KL---KPTSAGSDK----ENTAPYVAVEDKMVVAAVKCKRPPDGCERFATRTIRKPG-AG 325

Query: 150 SLSTLASLFQSSDLPDTNDSKSHPLPSSAVPTSNNRSRPPAGEKCCR 10
           + +  A++ Q++  P  + S + PL  ++     +R+   A     R
Sbjct: 326 AAAAAATIHQAA--PQASSSAAAPLTPASSSIGQHRTAQSAASSSRR 370


>ref|XP_004977697.1| PREDICTED: serine/arginine repetitive matrix protein 1-like
           [Setaria italica]
          Length = 607

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 6/201 (2%)
 Frame = -3

Query: 615 RRPPLQTLSCNVDLGTRSLPESPRASTSARAVDADRRLSLQ------INRLCQATYFDHS 454
           RR PL++LSCNV+   RSLP++PR STSARA     RLSLQ      ++R  Q      S
Sbjct: 172 RREPLRSLSCNVE--ARSLPDTPRGSTSARASWDGPRLSLQALKESVLDRAAQYMSMPSS 229

Query: 453 KSPKNKGHNLGKLYRDENKSPRNHHHSREMVKRVVKEIKLNETKARASLTEKKPTPAAGE 274
            +        GK  + E +      H+RE++++  + +   ++K+ +   EKK       
Sbjct: 230 PTSSAAAAAAGKKKKKERERAAK-EHAREILRQAKENVATRKSKSSSPAAEKK------- 281

Query: 273 HHPKIEPSKPKVAVNVVLNKCNKADSERFTGRIKKQHSKSGSLSTLASLFQSSDLPDTND 94
            H     +K  VA  VV +K                         L  + Q++  P T  
Sbjct: 282 RHSSFS-NKENVAAPVVEDK-------------------------LVVVVQAAAKPTTVA 315

Query: 93  SKSHPLPSSAVPTSNNRSRPP 31
           +K+H   +   P S+N  R P
Sbjct: 316 AKAHQGGTEHPPPSHNSPRVP 336


>ref|XP_002447411.1| hypothetical protein SORBIDRAFT_06g000630 [Sorghum bicolor]
           gi|241938594|gb|EES11739.1| hypothetical protein
           SORBIDRAFT_06g000630 [Sorghum bicolor]
          Length = 671

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 37/167 (22%)
 Frame = -3

Query: 615 RRPPLQTLSCNVDL-GTRSLPESPRASTSARAVDADRRLSLQ------INRLCQATYFDH 457
           RR PL++LSCNV +   RSLP++PRASTSARA     RLSLQ      ++R  Q  Y   
Sbjct: 241 RREPLRSLSCNVAVVEARSLPDTPRASTSARASWDGPRLSLQALKENVLDRAAQ--YMSM 298

Query: 456 SKSP----------KNKGHNLGKLYRDENKSPRNHHHSREMVKRVVKEIK-----LNETK 322
             SP          K K     +  R + K+     H+RE++++  + +       N   
Sbjct: 299 PSSPTSFSTSGNNNKKKKDTACRRRRRDEKAAAAKEHAREILRQAKETVASRKSGKNNNA 358

Query: 321 ARASLTEKK---------------PTPAAGEHHPKIEPSKPKVAVNV 226
           + +   +KK               P PAA    P +E +K +V V V
Sbjct: 359 SLSPAADKKQSCFNNKENVMMMSSPAPAAAPPAPAMEDAKLRVVVQV 405


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