BLASTX nr result
ID: Zingiber24_contig00026163
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026163
(611 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003570138.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 68 2e-09
ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] g... 66 7e-09
gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japo... 66 7e-09
gb|EAY87141.1| hypothetical protein OsI_08541 [Oryza sativa Indi... 66 7e-09
ref|XP_004953511.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 66 9e-09
gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobro... 63 6e-08
ref|XP_002452716.1| hypothetical protein SORBIDRAFT_04g031240 [S... 60 4e-07
ref|XP_002448425.1| hypothetical protein SORBIDRAFT_06g026980 [S... 56 7e-06
>ref|XP_003570138.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like
[Brachypodium distachyon]
Length = 382
Score = 68.2 bits (165), Expect = 2e-09
Identities = 44/149 (29%), Positives = 59/149 (39%), Gaps = 33/149 (22%)
Frame = -1
Query: 350 PSWVAYEPNKEAAT--------------LPPPL--------EGSDSGVGRTFSPXXXXXX 237
P+WV YEP ++ + PPP G D G FSP
Sbjct: 16 PTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDIAGPSGDDDSSGPAFSPLVIAII 75
Query: 236 XXXXXXXXXVSYYTIVTKYCGTFDTPWRR-----------SEHELYDDRWREERWDFSSS 90
VSYYTI++KYCGTF + W R H +++ W+ S S
Sbjct: 76 GVLASAFLLVSYYTIISKYCGTFSSLWTRLFGPGSGSGAGGGHGADSSAGQQDPWNLSPS 135
Query: 89 DGLEDASISKIPVRIYSSSGDGTVGGADC 3
DG+++ I+KI V Y V G DC
Sbjct: 136 DGMDETLINKITVCKYKRGDGFVVDGTDC 164
>ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group]
gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING
finger)-like [Oryza sativa Japonica Group]
gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa
Japonica Group] gi|215697950|dbj|BAG92134.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 389
Score = 66.2 bits (160), Expect = 7e-09
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Frame = -1
Query: 392 LAATTMASDGVSGSPSWVAYEPNKEAAT--------------LPPPL-------EGSDSG 276
+A++ + + P+WV YEP ++ + PPP SD
Sbjct: 4 MASSPPTTPNLGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDITGSSSDDS 63
Query: 275 VGRTFSPXXXXXXXXXXXXXXXVSYYTIVTKYCGTFDTPWRR----SEH-------ELYD 129
G TFSP VSYYTI++KYCGTF + R S H + D
Sbjct: 64 SGPTFSPLVIAIIGVLASAFLLVSYYTIISKYCGTFSSLRNRLLGSSAHRGSGGGADGGD 123
Query: 128 DRWREERWDFSSSDGLEDASISKIPVRIYSSSGDGTVGGADC 3
+ +E W + SDG+++ I+KI V Y GDG V DC
Sbjct: 124 NSRSQEPWSVALSDGMDETLINKITVCKY-RRGDGFVDSTDC 164
>gb|EAZ24248.1| hypothetical protein OsJ_07998 [Oryza sativa Japonica Group]
Length = 386
Score = 66.2 bits (160), Expect = 7e-09
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Frame = -1
Query: 392 LAATTMASDGVSGSPSWVAYEPNKEAAT--------------LPPPL-------EGSDSG 276
+A++ + + P+WV YEP ++ + PPP SD
Sbjct: 1 MASSPPTTPNLGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDITGSSSDDS 60
Query: 275 VGRTFSPXXXXXXXXXXXXXXXVSYYTIVTKYCGTFDTPWRR----SEH-------ELYD 129
G TFSP VSYYTI++KYCGTF + R S H + D
Sbjct: 61 SGPTFSPLVIAIIGVLASAFLLVSYYTIISKYCGTFSSLRNRLLGSSAHRGSGGGADGGD 120
Query: 128 DRWREERWDFSSSDGLEDASISKIPVRIYSSSGDGTVGGADC 3
+ +E W + SDG+++ I+KI V Y GDG V DC
Sbjct: 121 NSRSQEPWSVALSDGMDETLINKITVCKY-RRGDGFVDSTDC 161
>gb|EAY87141.1| hypothetical protein OsI_08541 [Oryza sativa Indica Group]
Length = 386
Score = 66.2 bits (160), Expect = 7e-09
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Frame = -1
Query: 392 LAATTMASDGVSGSPSWVAYEPNKEAAT--------------LPPPL-------EGSDSG 276
+A++ + + P+WV YEP ++ + PPP SD
Sbjct: 1 MASSPPTTPNLGSQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDITGSSSDDS 60
Query: 275 VGRTFSPXXXXXXXXXXXXXXXVSYYTIVTKYCGTFDTPWRR----SEH-------ELYD 129
G TFSP VSYYTI++KYCGTF + R S H + D
Sbjct: 61 SGPTFSPLVIAIIGVLASAFLLVSYYTIISKYCGTFSSLRNRLLGSSAHRGSGGGADGGD 120
Query: 128 DRWREERWDFSSSDGLEDASISKIPVRIYSSSGDGTVGGADC 3
+ +E W + SDG+++ I+KI V Y GDG V DC
Sbjct: 121 NSRSQEPWSVALSDGMDETLINKITVCKY-RRGDGFVDSTDC 161
>ref|XP_004953511.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 392
Score = 65.9 bits (159), Expect = 9e-09
Identities = 50/153 (32%), Positives = 61/153 (39%), Gaps = 33/153 (21%)
Frame = -1
Query: 362 VSGSPSWVAYEPNKEAAT--------------LPPPLE------GSDSGVGRTFSPXXXX 243
V P+WV YEP ++ + PPP GSD G TFSP
Sbjct: 14 VGPQPTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDLGGGSDDSSGPTFSPLVIA 73
Query: 242 XXXXXXXXXXXVSYYTIVTKYCGTFDTPWRRSEHELYDDRWR-------------EERWD 102
VSYYTI++KYCGTF + W R R R +E W
Sbjct: 74 IIGVLASAFLLVSYYTIISKYCGTFTSLWNRL---FGSGRGRGHGGDGGGGGSRSQEPWS 130
Query: 101 FSSSDGLEDASISKIPVRIYSSSGDGTVGGADC 3
DGL++ I+KI V Y GDG V DC
Sbjct: 131 SVPPDGLDETLINKITVCKY-KRGDGFVDSTDC 162
>gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 370
Score = 63.2 bits (152), Expect = 6e-08
Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = -1
Query: 305 PPPLEGSDSGVGRTFSPXXXXXXXXXXXXXXXVSYYTIVTKYCGTFDTPWRRSEH---EL 135
PPP+E D G FSP VSYYTI++KYCG D RR H E+
Sbjct: 39 PPPIEFPDDDSGPNFSPLVIAIIGILASAFLLVSYYTIISKYCGNVDPSRRRENHDPGEV 98
Query: 134 YDDRWR---EERWDFSSSDGLEDASISKIPVRIYSSSGDGTVGGADC 3
+D E W +S+ GL++A I I V Y GDG + G DC
Sbjct: 99 LEDNHSPSVHEPWQ-TSTTGLDEALIKSITVCKY-KKGDGLIEGTDC 143
>ref|XP_002452716.1| hypothetical protein SORBIDRAFT_04g031240 [Sorghum bicolor]
gi|241932547|gb|EES05692.1| hypothetical protein
SORBIDRAFT_04g031240 [Sorghum bicolor]
Length = 387
Score = 60.5 bits (145), Expect = 4e-07
Identities = 49/145 (33%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Frame = -1
Query: 350 PSWVAYEPNKEAAT--------------LPPP-----LEGSDSG---VGRTFSPXXXXXX 237
P+WV YEP ++ + PPP + G SG G TFSP
Sbjct: 18 PTWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPAFDIAGPGSGDDSSGPTFSPLVIAII 77
Query: 236 XXXXXXXXXVSYYTIVTKYCGTFDT-------PWRRSEHELYDDRWREERWDFSSSDGLE 78
VSYYTI++KYCGTF + P R D E W SDGL+
Sbjct: 78 GVLASAFLLVSYYTIISKYCGTFSSLRNMLFGPRRGRGGVGGGDSRSLEPWGAVPSDGLD 137
Query: 77 DASISKIPVRIYSSSGDGTVGGADC 3
+ I+KI V Y GDG V DC
Sbjct: 138 ETLINKITVCKY-KRGDGFVDSTDC 161
>ref|XP_002448425.1| hypothetical protein SORBIDRAFT_06g026980 [Sorghum bicolor]
gi|241939608|gb|EES12753.1| hypothetical protein
SORBIDRAFT_06g026980 [Sorghum bicolor]
Length = 398
Score = 56.2 bits (134), Expect = 7e-06
Identities = 50/168 (29%), Positives = 68/168 (40%), Gaps = 38/168 (22%)
Frame = -1
Query: 392 LAATTMASDGVSGSPSWVAYEPNKEAAT----------------LPPPLE----GSDSGV 273
+A++ +A G G P+WV YEP K+ + PPP + D
Sbjct: 1 MASSPLAISG--GQPTWVPYEPTKDCSQGLCSMYCPQWCYFIFPPPPPFDVGGPSPDDSS 58
Query: 272 GRTFSPXXXXXXXXXXXXXXXVSYYTIVTKYCGTFDTPWRR--SEHELYDDRWR------ 117
G FSP VSYYT V++YCGTF + R S + R R
Sbjct: 59 GPVFSPLVIAIIGVLAIAFLLVSYYTFVSRYCGTFGSFRGRVFSSNSGGGARRRGNGGGG 118
Query: 116 ----------EERWDFSSSDGLEDASISKIPVRIYSSSGDGTVGGADC 3
+E W+ S S GL++ ISKI + Y GD +V DC
Sbjct: 119 SSGGQGQSRSQESWNISPSTGLDETLISKITLCKY-KRGDASVHTTDC 165