BLASTX nr result

ID: Zingiber24_contig00026161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026161
         (725 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008854605.1| photosystem I assembly protein ycf4 [Curcuma...   114   3e-23
gb|AGE93381.1| photosystem I assembly protein ycf4 [Alpinia zeru...   114   3e-23
ref|YP_007475715.1| photosystem I assembly protein ycf4 [Zingibe...   114   3e-23
gb|AEJ10264.1| photosystem I assembly protein ycf4 [Renealmia al...   114   3e-23
gb|AGE93209.1| photosystem I assembly protein ycf4 [Calectasia n...   111   3e-22
gb|AEZ01437.1| photosystem I assembly protein ycf4 (chloroplast)...   111   3e-22
gb|AEJ10233.1| photosystem I assembly protein ycf4 [Belosynapsis...   111   3e-22
gb|AHA13021.1| photosystem I assembly protein ycf4 [Costus pulve...   110   4e-22
gb|AHA12935.1| photosystem I assembly protein ycf4 [Monocostus u...   110   4e-22
ref|YP_008854521.1| photosystem I assembly protein ycf4 [Ravenal...   110   4e-22
ref|YP_008854436.1| photosystem I assembly protein ycf4 [Musa te...   110   4e-22
gb|AEJ10238.1| photosystem I assembly protein ycf4 [Molineria ca...   110   4e-22
gb|ADO33458.1| photosystem I assembly protein ycf4 [Smilax china]     110   4e-22
ref|YP_001294363.1| photosystem I assembly protein Ycf4 [Dioscor...   110   4e-22
gb|AFM83304.1| photosystem I assembly protein ycf4 (chloroplast)...   110   5e-22
gb|AEJ10265.1| photosystem I assembly protein ycf4 [Sparganium e...   110   5e-22
gb|AEJ10251.1| photosystem I assembly protein ycf4 [Kingia austr...   110   5e-22
ref|YP_007475630.1| photosystem I assembly protein ycf4 [Helicon...   110   6e-22
gb|AEJ10269.1| photosystem I assembly protein ycf4 [Tradescantia...   110   6e-22
gb|AEJ10255.1| photosystem I assembly protein ycf4 [Neoastelia s...   110   6e-22

>ref|YP_008854605.1| photosystem I assembly protein ycf4 [Curcuma roscoeana]
           gi|557637512|gb|AHA13107.1| photosystem I assembly
           protein ycf4 [Curcuma roscoeana]
          Length = 184

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/73 (75%), Positives = 56/73 (76%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELITESRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITESRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQGVVMSFYGIAG
Sbjct: 61  PQGVVMSFYGIAG 73


>gb|AGE93381.1| photosystem I assembly protein ycf4 [Alpinia zerumbet]
          Length = 184

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/73 (75%), Positives = 56/73 (76%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELITESRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITESRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQGVVMSFYGIAG
Sbjct: 61  PQGVVMSFYGIAG 73


>ref|YP_007475715.1| photosystem I assembly protein ycf4 [Zingiber spectabile]
           gi|449326195|gb|AGE92780.1| photosystem I assembly
           protein ycf4 [Zingiber spectabile]
          Length = 184

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/73 (75%), Positives = 56/73 (76%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELITESRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITESRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQGVVMSFYGIAG
Sbjct: 61  PQGVVMSFYGIAG 73


>gb|AEJ10264.1| photosystem I assembly protein ycf4 [Renealmia alpinia]
          Length = 183

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/73 (75%), Positives = 56/73 (76%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELITESRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITESRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQGVVMSFYGIAG
Sbjct: 61  PQGVVMSFYGIAG 73


>gb|AGE93209.1| photosystem I assembly protein ycf4 [Calectasia narragara]
          Length = 184

 Score =  111 bits (277), Expect = 3e-22
 Identities = 53/73 (72%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEZ01437.1| photosystem I assembly protein ycf4 (chloroplast) [Japonolirion
           osense]
          Length = 184

 Score =  111 bits (277), Expect = 3e-22
 Identities = 53/73 (72%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEJ10233.1| photosystem I assembly protein ycf4 [Belosynapsis ciliata]
          Length = 184

 Score =  111 bits (277), Expect = 3e-22
 Identities = 53/73 (72%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGISSYLGRNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AHA13021.1| photosystem I assembly protein ycf4 [Costus pulverulentus]
          Length = 184

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLDSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AHA12935.1| photosystem I assembly protein ycf4 [Monocostus uniflorus]
          Length = 184

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLDSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>ref|YP_008854521.1| photosystem I assembly protein ycf4 [Ravenala madagascariensis]
           gi|557637009|gb|AHA12610.1| photosystem I assembly
           protein ycf4 [Ravenala madagascariensis]
          Length = 184

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>ref|YP_008854436.1| photosystem I assembly protein ycf4 [Musa textilis]
           gi|557636923|gb|AHA12525.1| photosystem I assembly
           protein ycf4 [Musa textilis]
          Length = 184

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEJ10238.1| photosystem I assembly protein ycf4 [Molineria capitulata]
          Length = 184

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|ADO33458.1| photosystem I assembly protein ycf4 [Smilax china]
          Length = 184

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>ref|YP_001294363.1| photosystem I assembly protein Ycf4 [Dioscorea elephantipes]
           gi|172048697|sp|A6MML8.1|YCF4_DIOEL RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|148668057|gb|ABR01441.1| photosystem I assembly
           protein ycf4 [Dioscorea elephantipes]
          Length = 186

 Score =  110 bits (276), Expect = 4e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AFM83304.1| photosystem I assembly protein ycf4 (chloroplast) [Kingia
           australis]
          Length = 184

 Score =  110 bits (275), Expect = 5e-22
 Identities = 51/73 (69%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLIS+FP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISIFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEJ10265.1| photosystem I assembly protein ycf4 [Sparganium eurycarpum]
          Length = 183

 Score =  110 bits (275), Expect = 5e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNL+SVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLLVGTSSYLGRNLLSVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEJ10251.1| photosystem I assembly protein ycf4 [Kingia australis]
          Length = 183

 Score =  110 bits (275), Expect = 5e-22
 Identities = 51/73 (69%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLIS+FP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISIFPSQQIIFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>ref|YP_007475630.1| photosystem I assembly protein ycf4 [Heliconia collinsiana]
           gi|449326109|gb|AGE92695.1| photosystem I assembly
           protein ycf4 [Heliconia collinsiana]
          Length = 184

 Score =  110 bits (274), Expect = 6e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQILFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEJ10269.1| photosystem I assembly protein ycf4 [Tradescantia ohiensis]
          Length = 184

 Score =  110 bits (274), Expect = 6e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLG+NLISVFP+QQIV  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFFGSLGFLVVGISSYLGKNLISVFPSQQIVFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


>gb|AEJ10255.1| photosystem I assembly protein ycf4 [Neoastelia spectabilis]
          Length = 183

 Score =  110 bits (274), Expect = 6e-22
 Identities = 52/73 (71%), Positives = 55/73 (75%)
 Frame = +2

Query: 506 MNWRSEHIWIELITESRKTSNFCWACIXXXXXXXXXXXXXXXYLGRNLISVFPTQQIVLS 685
           MNWRSEHIWIELIT SRKTSNFCWACI               YLGRNLISVFP+QQI+  
Sbjct: 1   MNWRSEHIWIELITGSRKTSNFCWACILFLGSLGFLVVGTSSYLGRNLISVFPSQQILFF 60

Query: 686 PQGVVMSFYGIAG 724
           PQG+VMSFYGIAG
Sbjct: 61  PQGIVMSFYGIAG 73


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