BLASTX nr result

ID: Zingiber24_contig00026135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026135
         (602 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302588.2| hypothetical protein POPTR_0002s16130g [Popu...    59   1e-06

>ref|XP_002302588.2| hypothetical protein POPTR_0002s16130g [Populus trichocarpa]
            gi|550345127|gb|EEE81861.2| hypothetical protein
            POPTR_0002s16130g [Populus trichocarpa]
          Length = 946

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
 Frame = +2

Query: 26   SDQGELAESSSLAVTSVSTDLNMEGNTEIIELFDTKSIVE-------FNELALPLKSSG- 181
            S   EL +     + SV  ++  EG  E+++  +T    E       F     PL   G 
Sbjct: 585  SASNELHDKEDKTLCSVGDEMPSEGEAEVVKETETAIDEESDVLDTLFEPSKSPLDGDGR 644

Query: 182  NELINETCEEESITSPCWDSGQEKSPTVVHAKPRPSNLIRENLMALESINEKQEQPSPVS 361
            N  ++E C+++  +       +E+ PT     P  S+  ++ L  LE  +E  E+PSP+S
Sbjct: 645  NGDMSEVCDKKENSECLEHDSEEQPPTSPLTSPSTSSNTKK-LDCLEGPSEIPERPSPIS 703

Query: 362  VLGTLTSDDINSLDSAEIEKYYNQVEHQQASHEEGNVVRILESSDLNDSIRDDLEDYEAR 541
            VL  L +++  S  S+  E     V+  +   EE        S+     ++  L+D E+ 
Sbjct: 704  VLEPLFTEEDVSPASSRFEPVELTVQPSRIQFEEHE-----SSAADRIPLKASLDDKESV 758

Query: 542  FDYVKAVLEASDL 580
            F+YVKAV++AS +
Sbjct: 759  FEYVKAVVQASGM 771


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