BLASTX nr result
ID: Zingiber24_contig00026114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026114
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 75 7e-12
tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 75 7e-12
ref|NP_001169380.1| uncharacterized protein LOC100383248 [Zea ma... 75 7e-12
ref|XP_004968951.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 75 9e-12
gb|EAY74478.1| hypothetical protein OsI_02369 [Oryza sativa Indi... 75 1e-11
ref|NP_001043295.1| Os01g0549400 [Oryza sativa Japonica Group] g... 75 1e-11
ref|XP_003566767.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 6e-11
ref|XP_002324002.1| hypothetical protein POPTR_0017s10760g [Popu... 72 6e-11
ref|XP_001771533.1| predicted protein [Physcomitrella patens] gi... 72 8e-11
ref|XP_004968358.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-10
ref|XP_004968357.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-10
ref|XP_004968356.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-10
ref|XP_004968355.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-10
ref|XP_004968354.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-10
emb|CCN25578.1| DEAD-box ATP-dependent RNA helicase, putative [T... 72 1e-10
gb|EMJ18202.1| hypothetical protein PRUPE_ppa002303mg [Prunus pe... 72 1e-10
gb|EMJ18201.1| hypothetical protein PRUPE_ppa002303mg [Prunus pe... 72 1e-10
ref|XP_001760431.1| predicted protein [Physcomitrella patens] gi... 71 2e-10
ref|XP_004298269.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 2e-10
gb|AFW80160.1| putative DEAD-box ATP-dependent RNA helicase fami... 70 2e-10
>tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 711
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 3/42 (7%)
Frame = -1
Query: 118 MAGGSTSS---RPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M+GG+ SS PRYAPDDPTLPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MSGGTGSSGRAAPRYAPDDPTLPKPWRGLVDGTTGYLYYWNP 42
>tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 802
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 3/42 (7%)
Frame = -1
Query: 118 MAGGSTSS---RPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M+GG+ SS PRYAPDDPTLPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MSGGTGSSGRAAPRYAPDDPTLPKPWRGLVDGTTGYLYYWNP 42
>ref|NP_001169380.1| uncharacterized protein LOC100383248 [Zea mays]
gi|224029005|gb|ACN33578.1| unknown [Zea mays]
Length = 498
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 3/42 (7%)
Frame = -1
Query: 118 MAGGSTSS---RPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M+GG+ SS PRYAPDDPTLPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MSGGTGSSGRAAPRYAPDDPTLPKPWRGLVDGATGYLYYWNP 42
>ref|XP_004968951.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X1
[Setaria italica]
Length = 806
Score = 75.1 bits (183), Expect = 9e-12
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M+G S + PRYAPDDP+LPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MSGSSGRAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNP 39
>gb|EAY74478.1| hypothetical protein OsI_02369 [Oryza sativa Indica Group]
Length = 792
Score = 74.7 bits (182), Expect = 1e-11
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M+ G+ + PRYAPDDP+LPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNP 39
>ref|NP_001043295.1| Os01g0549400 [Oryza sativa Japonica Group]
gi|143455968|sp|Q5JKF2.2|RH40_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 40
gi|57899403|dbj|BAD88050.1| putative ATP-dependent RNA
helicase DB10 [Oryza sativa Japonica Group]
gi|113532826|dbj|BAF05209.1| Os01g0549400 [Oryza sativa
Japonica Group] gi|125570769|gb|EAZ12284.1| hypothetical
protein OsJ_02174 [Oryza sativa Japonica Group]
Length = 792
Score = 74.7 bits (182), Expect = 1e-11
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M+ G+ + PRYAPDDP+LPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNP 39
>ref|XP_003566767.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like
[Brachypodium distachyon]
Length = 828
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
MAG ++ PRYAPDDPTLPKPWR LVDG+TGYLYYWNP
Sbjct: 1 MAG---TAAPRYAPDDPTLPKPWRGLVDGTTGYLYYWNP 36
>ref|XP_002324002.1| hypothetical protein POPTR_0017s10760g [Populus trichocarpa]
gi|222867004|gb|EEF04135.1| hypothetical protein
POPTR_0017s10760g [Populus trichocarpa]
Length = 726
Score = 72.4 bits (176), Expect = 6e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -1
Query: 115 AGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
A ++S+ PRYAPDDPTLPKPWR LVDG TGYLY+WNP
Sbjct: 4 AATTSSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNP 41
>ref|XP_001771533.1| predicted protein [Physcomitrella patens]
gi|162677260|gb|EDQ63733.1| predicted protein
[Physcomitrella patens]
Length = 684
Score = 72.0 bits (175), Expect = 8e-11
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M G + ++ PR+AP+DPTLP PWRALVDG+TGY+YYWNP
Sbjct: 1 MVGAAVAAAPRFAPEDPTLPAPWRALVDGNTGYIYYWNP 39
>ref|XP_004968358.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X5
[Setaria italica]
Length = 672
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1
Query: 121 SMAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S A S PRYAP DPTLPKPWRAL+DG+TGYLY+WNP
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNP 42
>ref|XP_004968357.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X4
[Setaria italica]
Length = 667
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1
Query: 121 SMAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S A S PRYAP DPTLPKPWRAL+DG+TGYLY+WNP
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNP 42
>ref|XP_004968356.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X3
[Setaria italica]
Length = 668
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1
Query: 121 SMAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S A S PRYAP DPTLPKPWRAL+DG+TGYLY+WNP
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNP 42
>ref|XP_004968355.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X2
[Setaria italica]
Length = 668
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1
Query: 121 SMAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S A S PRYAP DPTLPKPWRAL+DG+TGYLY+WNP
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNP 42
>ref|XP_004968354.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X1
[Setaria italica]
Length = 702
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1
Query: 121 SMAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S A S PRYAP DPTLPKPWRAL+DG+TGYLY+WNP
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNP 42
>emb|CCN25578.1| DEAD-box ATP-dependent RNA helicase, putative [Triticum aestivum]
Length = 814
Score = 71.6 bits (174), Expect = 1e-10
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -1
Query: 106 STSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S ++ PRYAPDDPT+PKPWR LVDG+TGYLYYWNP
Sbjct: 2 SGTAAPRYAPDDPTVPKPWRGLVDGTTGYLYYWNP 36
>gb|EMJ18202.1| hypothetical protein PRUPE_ppa002303mg [Prunus persica]
Length = 690
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 115 AGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
A + SS PRYAP+DPTLPKPWR LVDG TGYLY+WNP
Sbjct: 3 ATATASSGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNP 40
>gb|EMJ18201.1| hypothetical protein PRUPE_ppa002303mg [Prunus persica]
Length = 688
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 115 AGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
A + SS PRYAP+DPTLPKPWR LVDG TGYLY+WNP
Sbjct: 3 ATATASSGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNP 40
>ref|XP_001760431.1| predicted protein [Physcomitrella patens]
gi|162688445|gb|EDQ74822.1| predicted protein
[Physcomitrella patens]
Length = 675
Score = 70.9 bits (172), Expect = 2e-10
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
M G + S+ PRYAP DPTLP PW ALVDG+TGY+YYWNP
Sbjct: 1 MVGAAVSAAPRYAPADPTLPPPWTALVDGNTGYIYYWNP 39
>ref|XP_004298269.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Fragaria
vesca subsp. vesca]
Length = 1151
Score = 70.5 bits (171), Expect = 2e-10
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 118 MAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
MA +S PRYAPDDP+LPKPW+ L+DGSTG LYYWNP
Sbjct: 1 MATAEAASGPRYAPDDPSLPKPWKGLIDGSTGVLYYWNP 39
>gb|AFW80160.1| putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 232
Score = 70.5 bits (171), Expect = 2e-10
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = -1
Query: 121 SMAGGSTSSRPRYAPDDPTLPKPWRALVDGSTGYLYYWNP 2
S A S+ PRYAP DPTLPKPWR L+DG+TGYLY+WNP
Sbjct: 3 SSASAPASTGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNP 42