BLASTX nr result
ID: Zingiber24_contig00026098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026098
(449 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi... 92 9e-17
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera] 92 9e-17
ref|XP_002515957.1| nucleic acid binding protein, putative [Rici... 88 1e-15
gb|EXB60284.1| Poly(A) polymerase [Morus notabilis] 84 3e-14
ref|XP_006476000.1| PREDICTED: poly(A) polymerase-like isoform X... 84 3e-14
ref|XP_006475999.1| PREDICTED: poly(A) polymerase-like isoform X... 84 3e-14
ref|XP_006475997.1| PREDICTED: poly(A) polymerase-like isoform X... 84 3e-14
ref|XP_006475996.1| PREDICTED: poly(A) polymerase-like isoform X... 84 3e-14
ref|XP_006450734.1| hypothetical protein CICLE_v10007557mg [Citr... 84 3e-14
ref|XP_006450733.1| hypothetical protein CICLE_v10007557mg [Citr... 84 3e-14
gb|EMJ17642.1| hypothetical protein PRUPE_ppa022017mg, partial [... 83 3e-14
gb|EXB74588.1| Poly(A) polymerase [Morus notabilis] 81 2e-13
ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Popu... 81 2e-13
gb|EMS61327.1| Poly(A) polymerase [Triticum urartu] 79 6e-13
ref|XP_006465702.1| PREDICTED: poly(A) polymerase-like [Citrus s... 79 8e-13
gb|EOY29808.1| Poly(A) polymerase 1 isoform 8 [Theobroma cacao] 79 8e-13
gb|EOY29807.1| Poly(A) polymerase 1 isoform 7 [Theobroma cacao] 79 8e-13
gb|EOY29806.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao] 79 8e-13
gb|EOY29805.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao] 79 8e-13
gb|EOY29804.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao] 79 8e-13
>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 91.7 bits (226), Expect = 9e-17
Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGMEIYVSHVRRKQIPSYVFP+GYKR P RP V++ +E C+ GSSE+ KRK
Sbjct: 472 KPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRP-----VNQQQGDEACRTGSSEKHMKRK 526
Query: 267 VDVECLGTIPD---KRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQGEYTCKQM 106
D E + D KR +ISP+++ S+ + +S + S A G K++
Sbjct: 527 KDPEEVDVEQDKAAKRLTISPQRQDSVSPE---IISHRFSSSSQECSASGSAKAKEI 580
>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 91.7 bits (226), Expect = 9e-17
Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGMEIYVSHVRRKQIPSYVFP+GYKR P RP V++ +E C+ GSSE+ KRK
Sbjct: 463 KPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRP-----VNQQQGDEACRTGSSEKHMKRK 517
Query: 267 VDVECLGTIPD---KRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQGEYTCKQM 106
D E + D KR +ISP+++ S+ + +S + S A G K++
Sbjct: 518 KDPEEVDVEQDKAAKRLTISPQRQDSVSPE---IISHRFSSSSQECSASGSAKAKEI 571
>ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 712
Score = 87.8 bits (216), Expect = 1e-15
Identities = 50/92 (54%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKT-MSEEECQG-GSSERRRK 274
KPGMEIYVSHVRRKQIPSYVFPDGY+R R Q DKT + + G GSSER K
Sbjct: 434 KPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHK 493
Query: 273 RKVD---VECLGTIPDKRASISPEKEKSLKSD 187
RK D ++ +P+KR SISP++ S+ D
Sbjct: 494 RKKDSDEIDVKNDMPEKRNSISPQRRDSVSPD 525
>gb|EXB60284.1| Poly(A) polymerase [Morus notabilis]
Length = 668
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRRKQ+P++VFPDGYKRP SR + Q + CQ ++E++RK
Sbjct: 448 KPGMDIYVSHVRRKQLPTFVFPDGYKRPRLSRHVIPQAIKTCEDTVGCQPCATEKKRKND 507
Query: 267 VD-VECLGTIPDKRASISPEKEKSLKSD 187
+ V+ P+KRASISP++ SL +
Sbjct: 508 SEAVDVKSIKPEKRASISPQRVASLSPE 535
>ref|XP_006476000.1| PREDICTED: poly(A) polymerase-like isoform X5 [Citrus sinensis]
Length = 652
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/106 (45%), Positives = 60/106 (56%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+
Sbjct: 385 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE 444
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQ 130
+ E PDK K S+ S+ PVS + S D++
Sbjct: 445 KEHEMEEVRPDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 485
>ref|XP_006475999.1| PREDICTED: poly(A) polymerase-like isoform X4 [Citrus sinensis]
Length = 727
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/106 (45%), Positives = 60/106 (56%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+
Sbjct: 460 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE 519
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQ 130
+ E PDK K S+ S+ PVS + S D++
Sbjct: 520 KEHEMEEVRPDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 560
>ref|XP_006475997.1| PREDICTED: poly(A) polymerase-like isoform X2 [Citrus sinensis]
gi|568844234|ref|XP_006475998.1| PREDICTED: poly(A)
polymerase-like isoform X3 [Citrus sinensis]
Length = 727
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/106 (45%), Positives = 60/106 (56%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+
Sbjct: 463 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE 522
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQ 130
+ E PDK K S+ S+ PVS + S D++
Sbjct: 523 KEHEMEEVRPDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 563
>ref|XP_006475996.1| PREDICTED: poly(A) polymerase-like isoform X1 [Citrus sinensis]
Length = 730
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/106 (45%), Positives = 60/106 (56%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+
Sbjct: 463 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE 522
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQ 130
+ E PDK K S+ S+ PVS + S D++
Sbjct: 523 KEHEMEEVRPDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 563
>ref|XP_006450734.1| hypothetical protein CICLE_v10007557mg [Citrus clementina]
gi|557553960|gb|ESR63974.1| hypothetical protein
CICLE_v10007557mg [Citrus clementina]
Length = 671
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/106 (45%), Positives = 60/106 (56%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+
Sbjct: 385 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE 444
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQ 130
+ E PDK K S+ S+ PVS + S D++
Sbjct: 445 KEHEMEEVRPDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 485
>ref|XP_006450733.1| hypothetical protein CICLE_v10007557mg [Citrus clementina]
gi|557553959|gb|ESR63973.1| hypothetical protein
CICLE_v10007557mg [Citrus clementina]
Length = 749
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/106 (45%), Positives = 60/106 (56%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+PS+VFPDGYKRP PSR Q + CQ GSS R KR+
Sbjct: 463 KPGMDIYVSHVRRRQLPSFVFPDGYKRPRPSRHFNEQAGKPCEDVKMCQSGSSGRHLKRE 522
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQ 130
+ E PDK K S+ S+ PVS + S D++
Sbjct: 523 KEHEMEEVRPDKSV-----KRASISSEVPQPVSPGKTTGDSTNDSE 563
>gb|EMJ17642.1| hypothetical protein PRUPE_ppa022017mg, partial [Prunus persica]
Length = 581
Score = 83.2 bits (204), Expect = 3e-14
Identities = 53/110 (48%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKT--MSEEECQGGSSERRRK 274
KPGMEIYVSHVRR+Q+P YVFPDG KRP PSR M Q DK E GS ER K
Sbjct: 473 KPGMEIYVSHVRRRQLPPYVFPDGCKRPRPSRIMAQQQADKLPYYDGEVSMTGSGERHLK 532
Query: 273 RKVD---VECLGTIP-DKRASISPEKEKSLKSDGQGPVSIEENQSQSRTD 136
RK D V+ +P +KR S+SP+ D PV I + S + D
Sbjct: 533 RKKDLDGVDVNQVMPLEKRQSLSPQPR-----DSVSPVIISDKASSASPD 577
>gb|EXB74588.1| Poly(A) polymerase [Morus notabilis]
Length = 848
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGMEIYVSHVR++QIPSYVFPDGY+RP PSR + DK ++ Q S K+K
Sbjct: 474 KPGMEIYVSHVRKRQIPSYVFPDGYRRPRPSR-LITPKTDKPSEDKRSQNDSGRHYLKQK 532
Query: 267 VDVECLGT---IPDKRASISPEKEKSLKSD 187
E L P+K+ SI P++ S+ +
Sbjct: 533 KGTEVLDNKVGSPEKQQSIGPQQHSSISPE 562
>ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Populus trichocarpa]
gi|550337050|gb|EEE92115.2| hypothetical protein
POPTR_0006s25200g [Populus trichocarpa]
Length = 652
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+P +VFPDGYKR PSR + Q + Q GS+ER KRK
Sbjct: 332 KPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVKRK 391
Query: 267 VDVECLG---TIPDKRASISPEKEKSL 196
D E P+KRAS SP++ +S+
Sbjct: 392 NDCEMADLKPVKPEKRASTSPQRLQSV 418
>gb|EMS61327.1| Poly(A) polymerase [Triticum urartu]
Length = 763
Score = 79.0 bits (193), Expect = 6e-13
Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQH-VDKTMSEEECQGGSSERRRKR 271
KPGME+ VSHVRRK+IP+YVFP+GYKRP P R + QH DK + GS + + KR
Sbjct: 481 KPGMELAVSHVRRKEIPAYVFPEGYKRPRPQRHVNHQHQSDKNNTANGALTGSPDSQLKR 540
Query: 270 KVDVECLGTIPD----KRASISPEKEKSLKSDGQGPVSIEENQSQSRTDAQGEYTCKQMG 103
K D + KRASISP ++L S G +S + R+D+Q + T G
Sbjct: 541 KHDTTGIDDTEPCRSVKRASISPVHPRTL-SPRSGNIS-----DEPRSDSQQKVTSNASG 594
Query: 102 G 100
G
Sbjct: 595 G 595
>ref|XP_006465702.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
Length = 697
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/94 (47%), Positives = 56/94 (59%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGMEI VSH+RRKQIP YVFP+GYKR P + + E Q GS +R+K
Sbjct: 469 KPGMEICVSHIRRKQIPPYVFPEGYKR--TRHPRLASQQRSSENGNEYQTGSGLKRKKDP 526
Query: 267 VDVECLGTIPDKRASISPEKEKSLKSDGQGPVSI 166
V+ G P+KR SISP+K+ SL D P S+
Sbjct: 527 ESVDQDG--PEKRQSISPQKQDSLSPDHLAPSSV 558
>gb|EOY29808.1| Poly(A) polymerase 1 isoform 8 [Theobroma cacao]
Length = 603
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK
Sbjct: 251 KPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRK 310
Query: 267 VDVECLG---TIPDKRASISPEKEKSLKSD 187
+ E PDKR+SISP++ +S+ +
Sbjct: 311 HEDEAFDEKMDKPDKRSSISPQRLESVSPE 340
>gb|EOY29807.1| Poly(A) polymerase 1 isoform 7 [Theobroma cacao]
Length = 595
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK
Sbjct: 251 KPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRK 310
Query: 267 VDVECLG---TIPDKRASISPEKEKSLKSD 187
+ E PDKR+SISP++ +S+ +
Sbjct: 311 HEDEAFDEKMDKPDKRSSISPQRLESVSPE 340
>gb|EOY29806.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao]
Length = 751
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK
Sbjct: 473 KPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRK 532
Query: 267 VDVECLG---TIPDKRASISPEKEKSLKSD 187
+ E PDKR+SISP++ +S+ +
Sbjct: 533 HEDEAFDEKMDKPDKRSSISPQRLESVSPE 562
>gb|EOY29805.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao]
Length = 801
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK
Sbjct: 473 KPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRK 532
Query: 267 VDVECLG---TIPDKRASISPEKEKSLKSD 187
+ E PDKR+SISP++ +S+ +
Sbjct: 533 HEDEAFDEKMDKPDKRSSISPQRLESVSPE 562
>gb|EOY29804.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao]
Length = 804
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -3
Query: 447 KPGMEIYVSHVRRKQIPSYVFPDGYKRPCPSRPMFLQHVDKTMSEEECQGGSSERRRKRK 268
KPGM+IYVSHVRR+Q+P++VFPDGYKRP SR Q Q GS ER+ KRK
Sbjct: 473 KPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRK 532
Query: 267 VDVECLG---TIPDKRASISPEKEKSLKSD 187
+ E PDKR+SISP++ +S+ +
Sbjct: 533 HEDEAFDEKMDKPDKRSSISPQRLESVSPE 562