BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026067
         (701 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]              224   3e-56
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   224   3e-56
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     223   6e-56
gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]         221   2e-55
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   218   1e-54
ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arab...   216   6e-54
gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas...   216   7e-54
gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]         215   1e-53
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   214   2e-53
gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabi...   214   2e-53
gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wall...   214   3e-53
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   213   5e-53
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   213   5e-53
gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica ...   212   8e-53
ref|XP_006397715.1| hypothetical protein EUTSA_v10001360mg [Eutr...   210   3e-52
ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Caps...   210   4e-52
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   210   4e-52
gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola...   210   4e-52
gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus ...   209   5e-52
gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium ...   209   7e-52

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  224 bits (570), Expect = 3e-56
 Identities = 112/228 (49%), Positives = 156/228 (68%), Gaps = 5/228 (2%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPF-TDHRR----FLWNALIGSSSRGSHPREALLAFALMLFDSV 191
           S H PL   AR LF S  F   HR+    FLWNA+I S S G  PREA + F LML + V
Sbjct: 59  SSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGV 118

Query: 192 AADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARK 371
             D+F+FSL L  CSR+  + EG QIHGLL +  + S+ +LQN L+  Y +CG    AR+
Sbjct: 119 CVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQ 178

Query: 372 VFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNI 551
           +FDR+++RD+V++NSMI+GYVK   + +A ELFD M   +KN+++WN+M+SGY  S + +
Sbjct: 179 LFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGL 238

Query: 552 DAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
             A +LF+ MP RD++SWN MIDG VKCG++ +A  +F +MP+RDV+S
Sbjct: 239 RVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVS 286


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  224 bits (570), Expect = 3e-56
 Identities = 112/228 (49%), Positives = 156/228 (68%), Gaps = 5/228 (2%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPF-TDHRR----FLWNALIGSSSRGSHPREALLAFALMLFDSV 191
           S H PL   AR LF S  F   HR+    FLWNA+I S S G  PREA + F LML + V
Sbjct: 59  SSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGV 118

Query: 192 AADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARK 371
             D+F+FSL L  CSR+  + EG QIHGLL +  + S+ +LQN L+  Y +CG    AR+
Sbjct: 119 CVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQ 178

Query: 372 VFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNI 551
           +FDR+++RD+V++NSMI+GYVK   + +A ELFD M   +KN+++WN+M+SGY  S + +
Sbjct: 179 LFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGL 238

Query: 552 DAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
             A +LF+ MP RD++SWN MIDG VKCG++ +A  +F +MP+RDV+S
Sbjct: 239 RVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVS 286



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 39/252 (15%)
 Frame = +3

Query: 51  LARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTT 230
           +AR+LF  +   D   F  N++I       + +  ++  A  LFD +  ++       + 
Sbjct: 175 IARQLFDRMMKRDSVSF--NSMIDG-----YVKHGMVKSARELFDVMPMEQKNLISWNSM 227

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
            S  +R  EG ++   L +     +    N +I    KCG    A  +F+++ +RD V+W
Sbjct: 228 ISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSW 287

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPAR 590
            +M++GY K  ++  A  LFDEM  R  +V++ N M++GY  +   ++A     D +  +
Sbjct: 288 ANMVDGYAKLGEIDIARGLFDEMPER--DVISCNAMMAGYVQNGHLMEALNFFHDMLSRK 345

Query: 591 DMVSWNL---------------------------------------MIDGYVKCGRVVDA 653
           ++   N                                        +ID Y KCG + +A
Sbjct: 346 ELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNA 405

Query: 654 EDMFEKMPERDV 689
             +FE + ++ +
Sbjct: 406 LSVFEDIDDKSI 417



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
 Frame = +3

Query: 51  LARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLF-DSVAADEFAFSLALT 227
           +AR LF  +P  D      NA++    +  H  EAL  F  ML    +  D     + L+
Sbjct: 302 IARGLFDEMPERDV--ISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLS 359

Query: 228 TCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVA 407
             +++    EG  +H  +  +G + +  L   LI  Y+KCG    A  VF+ + ++    
Sbjct: 360 AIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDH 419

Query: 408 WNSMINGYVKEAKMSAAEELFDEMDSR--RKNVVTWNTMLSG------YTVSVQNIDAAR 563
           WN++I G         A ELF EM+    + + +T+  +L+           +   +  R
Sbjct: 420 WNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMR 479

Query: 564 QLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMP 677
           ++    P   +  +  M+D   + G V +A+   EKMP
Sbjct: 480 RVHKVEP--KLQHYGCMVDILGRAGHVEEAKKFVEKMP 515


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  223 bits (567), Expect = 6e-56
 Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 2/225 (0%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPF--TDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAAD 200
           SPHPPL   AR +FFS      +   FLWNA+I S S G  P++A + F +ML + V  D
Sbjct: 56  SPHPPLAEFARYVFFSRHAFGNEDDPFLWNAVIKSYSHGCDPKQAFVMFCMMLENGVRVD 115

Query: 201 EFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFD 380
           +F+FSL L  C R+  + EG QIHGLL K  + S+ YLQNGL+++Y +CG    AR+VFD
Sbjct: 116 KFSFSLILKACGRLGLVKEGLQIHGLLKKMEIGSDLYLQNGLVSWYLRCGCVEFARQVFD 175

Query: 381 RVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAA 560
            + +RD+V++NSMI+GYVK   +  A ELFD M    KN+VTWN+M+SGY  S  +++ A
Sbjct: 176 GMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMPLEEKNLVTWNSMISGYAQS--DLEFA 233

Query: 561 RQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
            +LF++MP RD VSWN MI+GYVK G++ DA  +F +MP+RD++S
Sbjct: 234 WELFETMPERDSVSWNTMINGYVKRGKIEDARSLFNRMPKRDIVS 278



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
 Frame = +3

Query: 48  HLARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALT 227
           H+AR LF  +P  D      NA++       +  E L  F  M    V+ D     +AL+
Sbjct: 293 HVARSLFNEMP--DRDVVACNAMMAGYVGNGYFMEGLEIFRHMQNGDVSPDVTTLLIALS 350

Query: 228 TCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVA 407
             +++  + +G  +H  + ++G+     L   LI  Y+KCG    A  VF+ + ER    
Sbjct: 351 AVAQLGHIEKGVALHFYIQENGVPLGRKLGVALIDMYAKCGSIDKAIAVFEGMEERSVDH 410

Query: 408 WNSMINGYVKEAKMSAAEELFDEMD--SRRKNVVTWNTMLS--GYTVSVQN----IDAAR 563
           WN+MI GY        A  L  EM+  S + + +T+  +L+  G+   V+      +  R
Sbjct: 411 WNAMIGGYAIHGLGELAFCLLMEMERLSVKPDDITFIGVLNACGHAGLVKEGLMCFELMR 470

Query: 564 QLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMP 677
           ++    P   +  +  ++D   + G V +A    E+MP
Sbjct: 471 RVHKVEP--KLQHYGCIVDMLGRAGHVEEARRFIEEMP 506


>gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
          Length = 615

 Score =  221 bits (562), Expect = 2e-55
 Identities = 105/199 (52%), Positives = 144/199 (72%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWNA+I S S G  PR+ALL F LML + V+ D+F+ SL L  CSR+  + EG Q HG 
Sbjct: 89  FLWNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQXHGF 148

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L K+G+ S+ +LQN LI  Y KCG    AR+VFDR+ +RD+V++NSMI+GYVK   + +A
Sbjct: 149 LRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESA 208

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            ELFD M S +KN+++WN+M++GY      +D A  LFD MP +D++SWN +IDGYVK G
Sbjct: 209 RELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLIDGYVKHG 268

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+D+F+KMP RDV++
Sbjct: 269 RIEDAKDLFDKMPRRDVVT 287



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
 Frame = +3

Query: 318 NGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKN 497
           N LI  Y K G    A+ +FD++  RD V W +M++GY K   +  A+ LFD+M  R  +
Sbjct: 258 NSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQR--D 315

Query: 498 VVTWNTMLSGYTVSVQNIDAARQLFDSMP-----ARDMVSWNLMIDGYVKCGRVVDAEDM 662
           VV +N+M++GY  +  +++A   +F+ M      + D  +  +++    + GR+  A DM
Sbjct: 316 VVAYNSMMAGYVQNRYHMEAI-DIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDM 374


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  218 bits (555), Expect = 1e-54
 Identities = 111/228 (48%), Positives = 151/228 (66%), Gaps = 5/228 (2%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPF-TDHRR----FLWNALIGSSSRGSHPREALLAFALMLFDSV 191
           S H PL   AR LF S  F   HR+    FLWNA+I S S G  P EA   F LML + V
Sbjct: 115 SSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGV 174

Query: 192 AADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARK 371
             D+F+FSL L  CSR+  + EG QIHGLL    + S+ +LQN L+  Y +CG    AR+
Sbjct: 175 CVDKFSFSLVLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQ 234

Query: 372 VFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNI 551
           +FDR++ RD+V++NSMI+GYVK   + +A ELFD M   +KN+++WN+M+SGY  S + +
Sbjct: 235 LFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGL 294

Query: 552 DAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
             A +LF+ MP RD++SWN MIDG VKCG++ +A  +F  MP+RDV+S
Sbjct: 295 RVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVS 342


>ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
           lyrata] gi|297327846|gb|EFH58266.1| hypothetical protein
           ARALYDRAFT_483672 [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score =  216 bits (550), Expect = 6e-54
 Identities = 104/200 (52%), Positives = 143/200 (71%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWNA+I S S G  PR+ALL F LML + V+ D+F+ SL L  CSR+  +  G QIHG 
Sbjct: 80  FLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGF 139

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L K+GL S+ +LQN LI  Y KCG    AR++FDR+ +RD+V++NSMINGYVK   + +A
Sbjct: 140 LRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIESA 199

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            ELFD M    KN+++WN+M+SGY  + + ++ A +LF  MP +D++SWN MIDGYVK G
Sbjct: 200 RELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSMIDGYVKHG 259

Query: 639 RVVDAEDMFEKMPERDVISC 698
           R+ DA+ +F+ MP RDV++C
Sbjct: 260 RIEDAKGLFDVMPRRDVVTC 279


>gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
          Length = 617

 Score =  216 bits (549), Expect = 7e-54
 Identities = 111/230 (48%), Positives = 153/230 (66%), Gaps = 7/230 (3%)
 Frame = +3

Query: 27  SPHPPLRHLARRLF------FSLPFTD-HRRFLWNALIGSSSRGSHPREALLAFALMLFD 185
           SP P L   AR +F       S P  +    FLWNA+I S S G  P++ALL F LML +
Sbjct: 60  SPRPYLAEFARLVFREYHVCSSSPGGEVEDPFLWNAVIKSHSHGKDPKQALLLFCLMLEN 119

Query: 186 SVAADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTA 365
            V+ D+F+ SL L  CSR+  +  G QIHG+L K+GL S+ +LQN LI  Y KCG    A
Sbjct: 120 GVSVDKFSMSLVLKACSRLGFVKGGLQIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFA 179

Query: 366 RKVFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQ 545
           R++FDR+ +RD+V++NSMI+GYVK   + +A ELFD M    KN+++WN+++SGY  +  
Sbjct: 180 RQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTSD 239

Query: 546 NIDAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
            +D A  LF  MP +D++SWN MIDGYVK GR+ DA+D+F+ MP RDV++
Sbjct: 240 GVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVT 289



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTC 233
           AR++F  +P  D   F  N++I       + +  L+  A  LFD +  +        +  
Sbjct: 179 ARQIFDRMPQRDSVSF--NSMIDG-----YVKRGLIESARELFDLMPREVKNLISWNSII 231

Query: 234 SRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWN 413
           S  ++  +G  I   L       +    N +I  Y K G    A+ +FD +  RD V W 
Sbjct: 232 SGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWA 291

Query: 414 SMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMP--- 584
           +MI+GY K   +  A+ LFD+M  R  +VV++N+M++GY  +  +++A  ++F  M    
Sbjct: 292 TMIDGYAKLGFVHQAKTLFDQMPHR--DVVSYNSMMAGYVQNKYHMEAL-EIFSDMEKES 348

Query: 585 --ARDMVSWNLMIDGYVKCGRVVDAEDM 662
             + D  +  +++    + GR+  A DM
Sbjct: 349 HLSPDETTLVIVLSAIAQLGRLSKAMDM 376


>gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
          Length = 612

 Score =  215 bits (548), Expect = 1e-53
 Identities = 104/199 (52%), Positives = 141/199 (70%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWNA+I S S G  PR+ALL F LML   V+ D+F+ SL L  CSR+  + EG QIHG 
Sbjct: 87  FLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQIHGF 146

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L K+G+ S+ YLQN LI  Y KCG    AR+VFDR+  RD+V++NSMI+GYVK   + +A
Sbjct: 147 LRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESA 206

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
             LFD M   +KN+++WN M+SGY      ++ A++LFD MP +D++SWN +IDGYVK G
Sbjct: 207 RGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHG 266

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+ +F KMP+RDV++
Sbjct: 267 RMEDAKSLFNKMPKRDVVT 285


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  214 bits (545), Expect = 2e-53
 Identities = 108/228 (47%), Positives = 149/228 (65%), Gaps = 5/228 (2%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSL-----PFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSV 191
           SP  PL   AR +FF+      P  D   FLWNA+I S S G   +EA +   LML + V
Sbjct: 59  SPFTPLVDFARYVFFTYLAFRSPKQDEDPFLWNAVIKSYSHGREAQEAFIILCLMLENGV 118

Query: 192 AADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARK 371
             D+F+ SL L  CS++  L EG Q+HGLL K    S+ +LQN LI++Y +CG    AR+
Sbjct: 119 PFDKFSLSLVLKACSQLGLLKEGMQVHGLLRKLNFGSDLFLQNCLISYYLRCGFIGYARQ 178

Query: 372 VFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNI 551
           +FDR+  RD+V++NSMI+GY+K   +  A+ELFD M    KN++TWN+M+SGYT     +
Sbjct: 179 LFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMISGYTQLKDGM 238

Query: 552 DAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
             A  LF+ MP RD++SWN MI+G+VKCG + DA+ +F+KMP RDV+S
Sbjct: 239 GLALGLFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDKMPRRDVVS 286


>gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
          Length = 579

 Score =  214 bits (545), Expect = 2e-53
 Identities = 107/225 (47%), Positives = 150/225 (66%), Gaps = 2/225 (0%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPFTDHRR--FLWNALIGSSSRGSHPREALLAFALMLFDSVAAD 200
           SP P L   AR +F    +       +LWNA+I S S G+ PR ALL F LML   V  D
Sbjct: 27  SPRPYLAEFARFVFHEYHYGGEVEDPYLWNAMIKSHSHGTDPRRALLLFCLMLEIGVPVD 86

Query: 201 EFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFD 380
           +F+ SL +  CSR+  +  G QIHG L K+GL S+ +LQN LI  Y KCG    AR++FD
Sbjct: 87  KFSLSLVMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIFD 146

Query: 381 RVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAA 560
           R+ +RD+V++NSMI+GYVK   + +A ELFD M    KN+++WN+++SGY  + + +D A
Sbjct: 147 RMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDIA 206

Query: 561 RQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
            +LF  MP +D++SWN MIDGYVK GR+ DA+D+F+ +P RDV++
Sbjct: 207 SKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDMVPRRDVVT 251


>gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
          Length = 617

 Score =  214 bits (544), Expect = 3e-53
 Identities = 103/199 (51%), Positives = 141/199 (70%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           +LWNA+I S S G+ PR ALL F LML + V+ D+F+ SL L  CSR+  + EG QIHG 
Sbjct: 91  YLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGF 150

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L K+GL S+ +LQN LI  Y KCG    AR++FDR+ +RD+V++NSMI+GYVK     +A
Sbjct: 151 LKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESA 210

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            ELFD M    KN+++WN+M+SGY  +   +D A +LF  MP +D++SWN MIDGYVK G
Sbjct: 211 RELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHG 270

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+ +F+ MP RDV++
Sbjct: 271 RIEDAKYLFDVMPRRDVVT 289


>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Citrus sinensis]
          Length = 634

 Score =  213 bits (542), Expect = 5e-53
 Identities = 105/225 (46%), Positives = 152/225 (67%), Gaps = 2/225 (0%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPFTDHRR--FLWNALIGSSSRGSHPREALLAFALMLFDSVAAD 200
           SP  PL   AR +FF       ++  FLWNA+I + S G  P+EAL+ F LML + V+ D
Sbjct: 59  SPCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVD 118

Query: 201 EFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFD 380
           +F+ SL L  CSR+  + EG QIHGLL K    S+ +LQN LI+ Y +CG    AR++FD
Sbjct: 119 KFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFD 178

Query: 381 RVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAA 560
           ++  RD+V++NSMI+GYVK   + +A ELFD M  R +N+++WN++L+GY      +  A
Sbjct: 179 KMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFA 238

Query: 561 RQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
            Q+F+ MP RD++SWN M+ G VKCG++ DA+ +F+KMP+RDV+S
Sbjct: 239 WQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVS 283



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALTT 230
           AR LF S+P  +     WN+++     G    ++ L FA  +F+ +   D  +++  L  
Sbjct: 204 ARELFDSMPIRERNLISWNSVLN----GYAQLKSGLQFAWQIFEKMPERDLISWNSMLHG 259

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
           C +  ++ +   +   + K  + S   + +G    Y+K G    AR++FD + +RD VA 
Sbjct: 260 CVKCGKMDDAQALFDKMPKRDVVSWANMIDG----YAKLGRVDIARRLFDEMPKRDVVAC 315

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSR---RKNVVTWNTMLSGYTVSVQNIDAARQLFDSM 581
           N+M+ GYV+      A E+FD M        +  +   +LS     + +ID    +   +
Sbjct: 316 NAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSA-IAQLGHIDKGVAIHRYL 374

Query: 582 PARDMVSWN-----LMIDGYVKCGRVVDAEDMFEKMPERDV 689
             +D  S N      +ID Y KCG + +A  +FE++ +  V
Sbjct: 375 -EKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSV 414



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
 Frame = +3

Query: 51  LARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDS-VAADEFAFSLALT 227
           +ARRLF  +P  D      NA++G   R  +  +AL  F  M  +  +  D+ +  + L+
Sbjct: 299 IARRLFDEMPKRDV--VACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLS 356

Query: 228 TCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVA 407
             +++  + +G  IH  L K   + N      LI  YSKCG    A KVF+++ +     
Sbjct: 357 AIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDH 416

Query: 408 WNSMINGYVKEAKMSAAEELFDEMD--SRRKNVVTWNTMLSG------YTVSVQNIDAAR 563
           WN+MING         A +L  EM+  S   + +T+  +L+           +   +  R
Sbjct: 417 WNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMR 476

Query: 564 QLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMP 677
           ++    P  ++  +  M+D   + G +  A ++ E MP
Sbjct: 477 RIHKLEP--ELQHYGCMVDILGRAGHIEAARNLIEDMP 512


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
           gi|557547533|gb|ESR58511.1| hypothetical protein
           CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  213 bits (542), Expect = 5e-53
 Identities = 105/225 (46%), Positives = 152/225 (67%), Gaps = 2/225 (0%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPFTDHRR--FLWNALIGSSSRGSHPREALLAFALMLFDSVAAD 200
           SP  PL   AR +FF       ++  FLWNA+I + S G  P+EAL+ F LML + V+ D
Sbjct: 116 SPCTPLTEFARYIFFKYHAFREKKDPFLWNAIIKTYSHGLDPKEALVMFCLMLDNGVSVD 175

Query: 201 EFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFD 380
           +F+ SL L  CSR+  + EG QIHGLL K    S+ +LQN LI+ Y +CG    AR++FD
Sbjct: 176 KFSASLVLKACSRLGLIEEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFD 235

Query: 381 RVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAA 560
           ++  RD+V++NSMI+GYVK   + +A ELFD M  R +N+++WN++L+GY      +  A
Sbjct: 236 KMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFA 295

Query: 561 RQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
            Q+F+ MP RD++SWN M+ G VKCG++ DA+ +F+KMP+RDV+S
Sbjct: 296 WQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVS 340



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALTT 230
           AR LF S+P  +     WN+++     G    ++ L FA  +F+ +   D  +++  L  
Sbjct: 261 ARELFDSMPIRERNLISWNSVLN----GYAQLKSGLQFAWQIFEKMPERDLISWNSMLHG 316

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
           C +  ++ +   +   + K  + S   + +G    Y+K G    AR++FD + +RD VA 
Sbjct: 317 CVKCGKMDDAQALFDKMPKRDVVSWANMIDG----YAKLGRVDIARRLFDEMPKRDVVAC 372

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSR---RKNVVTWNTMLSGYTVSVQNIDAARQLFDSM 581
           N+M+ GYV+      A E+FD M        +  +   +LS     + +ID    +   +
Sbjct: 373 NAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSA-IAQLGHIDKGVAIHRYL 431

Query: 582 PARDMVSWN-----LMIDGYVKCGRVVDAEDMFEKMPERDV 689
             +D  S N      +ID Y KCG + +A  +FE++ +  V
Sbjct: 432 -EKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSV 471



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
 Frame = +3

Query: 51  LARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDS-VAADEFAFSLALT 227
           +ARRLF  +P  D      NA++G   R  +  +AL  F  M  +  +  D+ +  + L+
Sbjct: 356 IARRLFDEMPKRDV--VACNAMMGGYVRNGYSMKALEIFDNMQCELYLHPDDASLVIVLS 413

Query: 228 TCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVA 407
             +++  + +G  IH  L K   + N      LI  YSKCG    A KVF+++ +     
Sbjct: 414 AIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDH 473

Query: 408 WNSMINGYVKEAKMSAAEELFDEMD--SRRKNVVTWNTMLSG------YTVSVQNIDAAR 563
           WN+MING         A +L  EM+  S   + +T+  +L+           +   +  R
Sbjct: 474 WNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLNACAHAGLVKEGLLCFELMR 533

Query: 564 QLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMP 677
           ++    P  ++  +  M+D   + G +  A ++ E MP
Sbjct: 534 RIHKLEP--ELQHYGCMVDILGRAGHIEAARNLIEDMP 569


>gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
          Length = 590

 Score =  212 bits (540), Expect = 8e-53
 Identities = 102/199 (51%), Positives = 138/199 (69%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWN +I S S G  PR+AL    LML  SV  D+F+ SLAL  CSR+  + EG+Q+HG 
Sbjct: 72  FLWNVVIKSHSHGVDPRKALFLLCLMLESSVPVDKFSLSLALKACSRLGFVKEGTQVHGF 131

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L+K+G  S+ +LQN LI  Y KCG    AR+VFDR+ ERD+V++NSMI+GYVK   + +A
Sbjct: 132 LIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLVESA 191

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            ELFD M   ++N++TWN+M+ GY      +D A +LFD MP +D++SWN MI GYVK G
Sbjct: 192 GELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISWNSMIGGYVKHG 251

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+ +F  MP RDV++
Sbjct: 252 RIEDAKGLFNVMPRRDVVT 270



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 14/226 (6%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALTT 230
           A  LF  +P        WN++IG    G   R   +  A  LFD +   D  +++  +  
Sbjct: 191 AGELFDLMPREKRNLITWNSMIG----GYAQRADGVDVAEKLFDEMPEKDLISWNSMIGG 246

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
             +  R+ +   +  ++ +  + +   + +G    Y K GL H A+ +FD++  RD VA+
Sbjct: 247 YVKHGRIEDAKGLFNVMPRRDVVTWAIMIDG----YGKLGLVHVAKTLFDQMPHRDVVAY 302

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPAR 590
           NSM++GYV+      A E+F+ M+         + +    T  V  + A  QL     A 
Sbjct: 303 NSMMSGYVQNRYHMEALEVFNHMEKE-------SHLTPDETSLVIVLSAIAQLGRLSKAI 355

Query: 591 DM----------VSWNL---MIDGYVKCGRVVDAEDMFEKMPERDV 689
           DM          +S  L   +ID Y KCG +  A  +FE +  + +
Sbjct: 356 DMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSI 401



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
 Frame = +3

Query: 42  LRHLARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDS-VAADEFAFSL 218
           L H+A+ LF  +P  D     +N+++    +  +  EAL  F  M  +S +  DE +  +
Sbjct: 283 LVHVAKTLFDQMPHRDV--VAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVI 340

Query: 219 ALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERD 398
            L+  +++ RL +   +H  +++     +  L   LI  YSKCG    A +VF+ +  + 
Sbjct: 341 VLSAIAQLGRLSKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKS 400

Query: 399 AVAWNSMINGYVKEAKMSAAEELFDEMDSR--RKNVVTWNTMLSGYTVSVQNIDAARQLF 572
              WN+MI G        +A ++  +++ R  + + +T+  +L+  + S   +      F
Sbjct: 401 IDHWNAMIGGLAVHGLGESAFDMLFQIERRSIKPDHITFVGVLNACSHS-GLVKEGLLCF 459

Query: 573 DSMPARDMVS-----WNLMIDGYVKCGRVVDAEDMFEKMP 677
           + M  +  +      +  M+D   + G +  A ++ E MP
Sbjct: 460 ELMRRKHKIEPRLQHYGCMVDILARSGSIKLARNLIEGMP 499


>ref|XP_006397715.1| hypothetical protein EUTSA_v10001360mg [Eutrema salsugineum]
           gi|557098788|gb|ESQ39168.1| hypothetical protein
           EUTSA_v10001360mg [Eutrema salsugineum]
          Length = 627

 Score =  210 bits (535), Expect = 3e-52
 Identities = 100/199 (50%), Positives = 139/199 (69%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWNA+I S S G  PR ALL F  ML + V+ D+F+ SL L +CSR+  +  G QIHG 
Sbjct: 101 FLWNAVIKSHSHGVDPRRALLLFCFMLENGVSVDKFSLSLVLKSCSRLGYVNGGMQIHGF 160

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L K+G+ S+ +LQN L   Y KCG    AR+VFDR+  RD+V++NSMI+GYVK   + +A
Sbjct: 161 LRKTGIWSDLFLQNCLTGMYLKCGCLGFARQVFDRMPRRDSVSYNSMIDGYVKSGAVESA 220

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            +LFD M   +KN++TWN+M+ GY  +   ++ A +LFD MP RD++SWN +IDGYVK G
Sbjct: 221 RDLFDLMPMEKKNLITWNSMICGYAQTAAGVNIASKLFDEMPERDLISWNSLIDGYVKHG 280

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+ +F+ MP RDV++
Sbjct: 281 RIEDAKGLFDAMPRRDVVT 299



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 14/226 (6%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALTT 230
           AR LF  +P        WN++I   ++ +    A +  A  LFD +   D  +++  +  
Sbjct: 220 ARDLFDLMPMEKKNLITWNSMICGYAQTA----AGVNIASKLFDEMPERDLISWNSLIDG 275

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
             +  R+ +   +   + +  + +   + +G    Y+K G  H A+ +FD++ +RD VA+
Sbjct: 276 YVKHGRIEDAKGLFDAMPRRDVVTWATMIDG----YAKLGFVHKAKSLFDQMPQRDVVAY 331

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPAR 590
           NSMI GYV+      A E+F++M+         + +    T  V  + A  QL     A 
Sbjct: 332 NSMIAGYVQNRYHMEALEIFNDMEKE-------SHLSPDETTLVIVLSAVAQLGQLSKAI 384

Query: 591 DMVSWNL-------------MIDGYVKCGRVVDAEDMFEKMPERDV 689
           DM  + +             +ID Y KCG +  A  +FE +  + +
Sbjct: 385 DMHLYIVEKQFLLGRKLGVALIDMYSKCGSIQHAMWVFEGIESKSI 430


>ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Capsella rubella]
           gi|482564793|gb|EOA28983.1| hypothetical protein
           CARUB_v10025235mg [Capsella rubella]
          Length = 607

 Score =  210 bits (534), Expect = 4e-52
 Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 7/230 (3%)
 Frame = +3

Query: 27  SPHPPLRHLARRLF------FSLPFTDHRR-FLWNALIGSSSRGSHPREALLAFALMLFD 185
           SP P L   AR +F       S P  + +  FLWNA+I S S G  P++ALL F LML +
Sbjct: 50  SPRPFLAEFARLVFREYHVCASSPGGEVKDPFLWNAVIKSHSHGKDPKQALLLFCLMLEN 109

Query: 186 SVAADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTA 365
            V+ DEF+ SL L  CSR+  +  G QIHG L K+GL S+ +L N LI  Y KCG    A
Sbjct: 110 GVSVDEFSMSLVLKACSRLGFVKGGLQIHGFLRKTGLWSDLFLHNCLIGLYLKCGCLGFA 169

Query: 366 RKVFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQ 545
           R++FDR+ +RD+V++NSMI+GYVK   + +A ELFD M    KN+++WN+++SGY  +  
Sbjct: 170 RQIFDRMPQRDSVSFNSMIDGYVKCGSIESARELFDLMPREVKNLISWNSIISGYAQASN 229

Query: 546 NIDAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
             D A +LF  MP +D++SWN MIDGYVK GR+ DA+++F+ MP RDV++
Sbjct: 230 GFDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKELFDVMPSRDVVT 279



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
 Frame = +3

Query: 318 NGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKN 497
           N +I  Y K G    A+++FD +  RD V W +MI+GY K   +  A+ LFD+M  R  +
Sbjct: 250 NSMIDGYVKHGRIEDAKELFDVMPSRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHR--D 307

Query: 498 VVTWNTMLSGYTVSVQNIDAARQLFDSMP-----ARDMVSWNLMIDGYVKCGRVVDAEDM 662
           VV++N+M++GY  +  +++A  ++F  M      + D  +  +++    + GR+  A DM
Sbjct: 308 VVSYNSMMAGYVQNKYHMEAL-EIFSHMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDM 366


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  210 bits (534), Expect = 4e-52
 Identities = 108/231 (46%), Positives = 147/231 (63%), Gaps = 8/231 (3%)
 Frame = +3

Query: 27  SPHPPLRHLARRLFFSLPFTDHRR--------FLWNALIGSSSRGSHPREALLAFALMLF 182
           SPH PL   AR +FF+       R        FLWNA+I S S G+ P  AL+ F +ML 
Sbjct: 59  SPHKPLVEFARYVFFTRYAVQRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLE 118

Query: 183 DSVAADEFAFSLALTTCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHT 362
           +    D+F+FSL L  C+R+  + EG QIHGLL+K  + SN +L N LIA Y +CG    
Sbjct: 119 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 178

Query: 363 ARKVFDRVLERDAVAWNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSV 542
           AR+VFDR+  +D+V++NSMI+GYVK   +  A ELFD M    KN+++WN+ML G+  + 
Sbjct: 179 ARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTK 238

Query: 543 QNIDAARQLFDSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
             I  A +LF+ MP RD+VSWN +I G+ KCGR+  A  +F +MP+RDVIS
Sbjct: 239 DGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVIS 289



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
 Frame = +3

Query: 51  LARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALT 227
           LAR LF S+P  D     WN+++G  ++        +  AL LF+ +   D  +++  + 
Sbjct: 209 LARELFDSMPLEDKNLISWNSMLGGFAQTKDG----IGLALELFEKMPERDLVSWNTIIG 264

Query: 228 TCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVA 407
             ++  R+     +   + K  + S     + +I  Y+K G    AR +FD + ++D VA
Sbjct: 265 GFAKCGRIEFAHSLFNRMPKRDVIS----WSNMIDGYAKLGDIKVARTLFDEMPDKDVVA 320

Query: 408 WNSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPA 587
           +N+++ GY +    + A E+F EM  R+ N+    T L      V  + A  QL     A
Sbjct: 321 FNTIMAGYAQNGYYTEALEIFHEM-QRQSNLSPDETTL------VVALSAISQLGHVEKA 373

Query: 588 RDMVSWNL-------------MIDGYVKCGRVVDAEDMFEKMPERDV 689
             M ++ L             +ID Y KCG + +A  +F+ + ++ +
Sbjct: 374 ASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGI 420



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
 Frame = +3

Query: 51  LARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDS-VAADEFAFSLALT 227
           +AR LF  +P  D   F  N ++   ++  +  EAL  F  M   S ++ DE    +AL+
Sbjct: 305 VARTLFDEMPDKDVVAF--NTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALS 362

Query: 228 TCSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVA 407
             S++  + + + +H   L++G++    +   LI  YSKCG    A  +FD V ++    
Sbjct: 363 AISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDH 422

Query: 408 WNSMINGYVKEAKMSAAEELFDEM 479
           WN+MI+G  +      A  +  EM
Sbjct: 423 WNAMISGMARNGLGKLAFGMLLEM 446


>gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
          Length = 584

 Score =  210 bits (534), Expect = 4e-52
 Identities = 101/199 (50%), Positives = 142/199 (71%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWNA+I S S G  PR ALL F LM+ +SV+ D+F+ SL L  CSR+  +  G Q+HG 
Sbjct: 59  FLWNAVIKSFSHGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQVHGF 118

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L K+G+ S+ +LQN LI  Y KCG    AR+VFDR+ +RD+V++NSMI+GYVK   + +A
Sbjct: 119 LRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESA 178

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            ELFD M   +KN+++WN M+SGYT S   ++ A +LFD MP +D++SWN +IDGYVK  
Sbjct: 179 RELFDLMPREKKNLISWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDGYVKHR 238

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+ +F+ MP +DV++
Sbjct: 239 RIEDAKSLFDLMPRKDVVT 257



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALTT 230
           AR LF  +P        WN +I   ++     E  +  A  LFD +   D  +++  +  
Sbjct: 178 ARELFDLMPREKKNLISWNCMISGYTQS----EDGVNVASKLFDEMPEKDLISWNSLIDG 233

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
             +  R+ +   +  L+ +  + +   + +G    Y+K G  H A+K+FD + +RD VA+
Sbjct: 234 YVKHRRIEDAKSLFDLMPRKDVVTWATMIDG----YAKLGFVHQAKKLFDEMPQRDVVAY 289

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQ------NIDAARQLF 572
           NSM+ GYV+    + A  +F++M+          T++   +   Q       +D    + 
Sbjct: 290 NSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIM 349

Query: 573 DSMPARDMVSWNLMIDGYVKCGRVVDAEDMFEKMPERDV 689
           D+           +ID Y KCG +  +  +FE++  + +
Sbjct: 350 DNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSI 388


>gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
          Length = 577

 Score =  209 bits (533), Expect = 5e-52
 Identities = 101/199 (50%), Positives = 139/199 (69%)
 Frame = +3

Query: 99  FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRISRLLEGSQIHGL 278
           FLWNA+I S S G+ PR+ALL F LML + V  D+F+ SL L  CSR+    EG Q+HG 
Sbjct: 59  FLWNAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKACSRLGFAKEGMQVHGF 118

Query: 279 LLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMINGYVKEAKMSAA 458
           L+KS   S+ +LQN LI  Y KCG    AR+VFDR+ +RD+V++NSMI+GYVK   + +A
Sbjct: 119 LIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESA 178

Query: 459 EELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSWNLMIDGYVKCG 638
            ELFD M   ++N++TWN+M+ GY      ++ A +LFD MP +D++SWN MI GYVK G
Sbjct: 179 GELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMIGGYVKHG 238

Query: 639 RVVDAEDMFEKMPERDVIS 695
           R+ DA+ +F+ MP RDV++
Sbjct: 239 RIEDAKGLFDVMPRRDVVT 257



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
 Frame = +3

Query: 54  ARRLFFSLPFTDHRRFLWNALIGSSSRGSHPREALLAFALMLFDSVAA-DEFAFSLALTT 230
           A  LF  +P        WN++IG    G   R   +  A  LFD +   D  +++  +  
Sbjct: 178 AGELFDLMPREKRNLITWNSMIG----GYAQRADGVNVASKLFDEMPEKDLISWNSMIGG 233

Query: 231 CSRISRLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAW 410
             +  R+ +   +  ++ +  + +   + +G    Y K GL H A+ +FD++  RD VA+
Sbjct: 234 YVKHGRIEDAKGLFDVMPRRDVVTWAIMIDG----YGKLGLVHQAKTLFDQMPHRDVVAY 289

Query: 411 NSMINGYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDS---- 578
           NSM++G+V+      A E+F+ M+ +  ++    T L     ++  +    +  D     
Sbjct: 290 NSMMSGFVQNRYHIEALEVFNHME-KESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYI 348

Query: 579 MPARDMVSWNL---MIDGYVKCGRVVDAEDMFEKMPERDV 689
           +  R ++S  L   +ID Y KCG +  A  +FE +  + +
Sbjct: 349 VEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSI 388


>gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
          Length = 597

 Score =  209 bits (532), Expect = 7e-52
 Identities = 103/210 (49%), Positives = 145/210 (69%), Gaps = 1/210 (0%)
 Frame = +3

Query: 69  FSLPFTDHRR-FLWNALIGSSSRGSHPREALLAFALMLFDSVAADEFAFSLALTTCSRIS 245
           +SLP+ +    FLWNA+I S S G+ PR +L  F LML + V+ D+F+ SL L  CSR+ 
Sbjct: 60  YSLPYGETEDPFLWNAVIKSHSHGTDPRRSLFLFCLMLENGVSVDKFSLSLVLKACSRLG 119

Query: 246 RLLEGSQIHGLLLKSGLASNPYLQNGLIAFYSKCGLPHTARKVFDRVLERDAVAWNSMIN 425
            +  G  IHG L K+GL S+ +LQN LI  Y KCG    +R+VFDR+ +RD+V++NSMI+
Sbjct: 120 FVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMID 179

Query: 426 GYVKEAKMSAAEELFDEMDSRRKNVVTWNTMLSGYTVSVQNIDAARQLFDSMPARDMVSW 605
           GYVK   + +A ELFD M    KN+++WN ++SGY  +   ++ A +LF  MP +D++SW
Sbjct: 180 GYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISW 239

Query: 606 NLMIDGYVKCGRVVDAEDMFEKMPERDVIS 695
           N MIDGYVK GR+ DA+D+F+ MP RDVI+
Sbjct: 240 NSMIDGYVKHGRIEDAKDLFDVMPRRDVIT 269