BLASTX nr result
ID: Zingiber24_contig00026058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026058
(337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus pe... 100 2e-19
gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao] 88 1e-15
gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao] 88 1e-15
gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao] 88 1e-15
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235... 88 1e-15
gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis] 87 3e-15
ref|XP_002311179.2| hypothetical protein POPTR_0008s05850g [Popu... 86 5e-15
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin... 86 5e-15
emb|CBI31647.3| unnamed protein product [Vitis vinifera] 86 5e-15
ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 86 7e-15
ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 86 7e-15
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max] 85 9e-15
ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|2235... 85 9e-15
ref|XP_002316273.2| hypothetical protein POPTR_0010s20870g [Popu... 85 1e-14
ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria ... 84 1e-14
gb|EPS62584.1| hypothetical protein M569_12206, partial [Genlise... 83 3e-14
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa... 83 4e-14
ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Popu... 83 4e-14
ref|XP_004507166.1| PREDICTED: pumilio homolog 2-like isoform X1... 83 4e-14
gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis] 82 6e-14
>gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
Length = 1021
Score = 100 bits (250), Expect = 2e-19
Identities = 53/108 (49%), Positives = 71/108 (65%)
Frame = +3
Query: 12 SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHD 191
+GN +++EQ+N A + DL NI RSGSAPPTV+ S TAV SLFG+
Sbjct: 21 NGNLEDALQSELELILREQRNQHAIHRERDL---NIYRSGSAPPTVEGSLTAVGSLFGNS 77
Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
F D TS R+ + G LSE+++RSHP YLSYY+S++N NPR+PPP +
Sbjct: 78 DFRDVTS--RISNNNGVLSEDEIRSHPTYLSYYYSHDNINPRLPPPLL 123
>gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao]
Length = 767
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
++Q +N + + DL NI RSGSAPPTV+ S +AV SLF + FGD V S
Sbjct: 26 ILQAHRNQQFVGRERDL---NIYRSGSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGS 82
Query: 234 G-----GFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
G LSE+++RSHP YLSYY+S+EN NPR+PPP +
Sbjct: 83 SSSSNNGMLSEDEIRSHPAYLSYYYSHENINPRLPPPLL 121
>gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao]
Length = 907
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
++Q +N + + DL NI RSGSAPPTV+ S +AV SLF + FGD V S
Sbjct: 26 ILQAHRNQQFVGRERDL---NIYRSGSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGS 82
Query: 234 G-----GFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
G LSE+++RSHP YLSYY+S+EN NPR+PPP +
Sbjct: 83 SSSSNNGMLSEDEIRSHPAYLSYYYSHENINPRLPPPLL 121
>gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]
Length = 1026
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
++Q +N + + DL NI RSGSAPPTV+ S +AV SLF + FGD V S
Sbjct: 26 ILQAHRNQQFVGRERDL---NIYRSGSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGS 82
Query: 234 G-----GFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
G LSE+++RSHP YLSYY+S+EN NPR+PPP +
Sbjct: 83 SSSSNNGMLSEDEIRSHPAYLSYYYSHENINPRLPPPLL 121
>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
pumilio, putative [Ricinus communis]
Length = 1024
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/108 (43%), Positives = 65/108 (60%)
Frame = +3
Query: 12 SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHD 191
+GN ++Q Q+N + DL NI RSGSAPPTV+ S +AV SLF +
Sbjct: 21 NGNLEDSFQSELEMILQAQRNQHYIDRERDL---NIYRSGSAPPTVEGSLSAVGSLFRNP 77
Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
F D +S S LS++++RSHP YLSYY+S++N NPR+PPP +
Sbjct: 78 NFSDVSSISNSSRSNTVLSDDEIRSHPAYLSYYYSHDNINPRLPPPLL 125
>gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]
Length = 989
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/95 (47%), Positives = 66/95 (69%)
Frame = +3
Query: 51 ALIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQE 230
++++E +N + DL NI RSGSAPPTV+ S +AV SLFG+ + ++ R
Sbjct: 17 SILREHRNQSVMDRERDL---NIYRSGSAPPTVEGSLSAVGSLFGNSDVKEINTNSRGFN 73
Query: 231 SGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
+GG LSE+++RSHP YLSYY+S++N NPR+PPP +
Sbjct: 74 NGG-LSEDEIRSHPAYLSYYYSHDNMNPRLPPPLL 107
>ref|XP_002311179.2| hypothetical protein POPTR_0008s05850g [Populus trichocarpa]
gi|550332510|gb|EEE88546.2| hypothetical protein
POPTR_0008s05850g [Populus trichocarpa]
Length = 999
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/94 (47%), Positives = 64/94 (68%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
LI+EQ+ + A +++ E+NI RSGSAPPTV+ S +++ LF G G ++
Sbjct: 27 LIREQRLQQEATSEIE-KELNIYRSGSAPPTVEGSLSSIGGLFD----GTGIPGIKNSNR 81
Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
GGFLSEE LRS P Y++YY+SN N NPR+PPP++
Sbjct: 82 GGFLSEEVLRSDPAYVNYYYSNVNLNPRLPPPSL 115
>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/94 (50%), Positives = 61/94 (64%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
LI+EQ+ AA D + E++I RSGSAPPTV+ S +AV LFG G G T
Sbjct: 31 LIREQRRQEVAASDRE-KELSIYRSGSAPPTVEGSLSAVGGLFGGGGDGSDT-------- 81
Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
GF SEE+LR+ P Y++YY+SN N NPR+PPP +
Sbjct: 82 -GFASEEELRADPAYVNYYYSNVNLNPRLPPPRL 114
>emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/94 (50%), Positives = 61/94 (64%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
LI+EQ+ AA D + E++I RSGSAPPTV+ S +AV LFG G G T
Sbjct: 14 LIREQRRQEVAASDRE-KELSIYRSGSAPPTVEGSLSAVGGLFGGGGDGSDT-------- 64
Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
GF SEE+LR+ P Y++YY+SN N NPR+PPP +
Sbjct: 65 -GFASEEELRADPAYVNYYYSNVNLNPRLPPPRL 97
>ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/108 (43%), Positives = 65/108 (60%)
Frame = +3
Query: 12 SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHD 191
+GN L++E N+ A DL NI RSGSAPPTV+ S AV SLF
Sbjct: 21 AGNFEDNLRTELELLLRENSNHSVAGRGGDL---NIYRSGSAPPTVEGSINAVGSLFTSS 77
Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
+ + + + + G LSE+++RSHPDYLSYY+SN++ NPR+PPP +
Sbjct: 78 YYNEFNT--KSGSNDGVLSEDEIRSHPDYLSYYYSNDHINPRLPPPLV 123
>ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/108 (43%), Positives = 65/108 (60%)
Frame = +3
Query: 12 SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHD 191
+GN L++E N+ A DL NI RSGSAPPTV+ S AV SLF
Sbjct: 21 AGNFEDNLRTELELLLRENSNHSVAGRGGDL---NIYRSGSAPPTVEGSINAVGSLFTSS 77
Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
+ + + + + G LSE+++RSHPDYLSYY+SN++ NPR+PPP +
Sbjct: 78 YYNEFNT--KSGSNDGVLSEDEIRSHPDYLSYYYSNDHINPRLPPPLV 123
>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = +3
Query: 108 EVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRV-------QESGGFLSEEDLRS 266
E+N+ RSGSAPPTV+ S +AV LFG G G GT+ V + GF SEE+LRS
Sbjct: 44 ELNLYRSGSAPPTVEGSLSAVGGLFGGGGGGAGTAAGAVFSEFSGAKSGNGFSSEEELRS 103
Query: 267 HPDYLSYYFSNENHNPRMPPPAI 335
P YLSYY+SN N NPR+PPP +
Sbjct: 104 DPAYLSYYYSNVNLNPRLPPPLL 126
>ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|223536477|gb|EEF38124.1|
pumilio, putative [Ricinus communis]
Length = 1011
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/94 (47%), Positives = 61/94 (64%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
LI+EQ+ + AA D + E+NI RSGSAPPTV+ S ++ LF G +
Sbjct: 27 LIREQRLQQEAASDRE-KELNIYRSGSAPPTVEGSLNSIGGLFDTTGLAGIAN---TNSK 82
Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
GGFLSEE++RS P Y++YY+SN N NPR+PPP +
Sbjct: 83 GGFLSEEEIRSDPAYVNYYYSNVNLNPRLPPPVL 116
>ref|XP_002316273.2| hypothetical protein POPTR_0010s20870g [Populus trichocarpa]
gi|550330257|gb|EEF02444.2| hypothetical protein
POPTR_0010s20870g [Populus trichocarpa]
Length = 973
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/94 (47%), Positives = 62/94 (65%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
LI+EQ+ + AA + + E+NI RSGSAPPTV+ S +++ LF G G ++
Sbjct: 27 LIREQRLQQEAASERE-KELNIYRSGSAPPTVEGSLSSIGGLFD----GTGIPGIKKSNK 81
Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
G FLSEED RS P Y++YY+SN N NPR+PPP +
Sbjct: 82 GEFLSEEDFRSDPAYVNYYYSNVNLNPRLPPPLL 115
>ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria vesca subsp. vesca]
Length = 1022
Score = 84.3 bits (207), Expect = 1e-14
Identities = 45/108 (41%), Positives = 64/108 (59%)
Frame = +3
Query: 12 SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHD 191
+GN ++++ +N +A DL N+ RSGSAPPTV+ S +AV SLF +
Sbjct: 21 NGNLSDVLQSELELILRQHRNQQAIHMGRDL---NMYRSGSAPPTVEGSLSAVGSLFRNS 77
Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
F D RV + G SE+++RSH YLSYY+S++N NPR PPP +
Sbjct: 78 DFRDRDMSSRVSSNNGGFSEDEVRSHIAYLSYYYSHDNINPRNPPPLL 125
>gb|EPS62584.1| hypothetical protein M569_12206, partial [Genlisea aurea]
Length = 558
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = +3
Query: 108 EVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES---GGFLSEEDLRSHPDY 278
E+N+ RSGSAPPTV+ S +A+ F H G T V E+ GFLSEE+LRS P Y
Sbjct: 41 ELNLCRSGSAPPTVEGSLSAIGGFFSHGGGAGSTFGGDVTENEVGNGFLSEEELRSDPKY 100
Query: 279 LSYYFSNENHNPRMPPPAI 335
SYY+SN N NPR+PPP++
Sbjct: 101 SSYYYSNVNLNPRLPPPSL 119
>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1065
Score = 82.8 bits (203), Expect = 4e-14
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGT--SHLRVQ 227
L++EQ+ A D E+N+ RSGSAPPTV+ S AV LFG G G + + +
Sbjct: 29 LLREQRRQEA---DDREKELNLYRSGSAPPTVEGSLNAVGGLFGGGGNGGASFSDFIGGK 85
Query: 228 ESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
GF SE++LRS P YLSYY+SN N NPR+PPP +
Sbjct: 86 NGNGFTSEKELRSDPAYLSYYYSNVNLNPRLPPPLL 121
>ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Populus trichocarpa]
gi|550330981|gb|EEE88119.2| hypothetical protein
POPTR_0009s03980g [Populus trichocarpa]
Length = 1009
Score = 82.8 bits (203), Expect = 4e-14
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Frame = +3
Query: 54 LIQEQQNNRAAAFDLDLDEVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGT--SHLRVQ 227
L++EQ+ A D E+N+ RSGSAPPTV+ S AV LFG G G + +
Sbjct: 29 LLREQRRQEA---DDREKELNLYRSGSAPPTVEGSLNAVGGLFGGGGHGGASFSDFASGK 85
Query: 228 ESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAI 335
GF++E++LRS P YLSYY+SN N NPR+PPP +
Sbjct: 86 NGNGFITEKELRSDPAYLSYYYSNVNLNPRLPPPLL 121
>ref|XP_004507166.1| PREDICTED: pumilio homolog 2-like isoform X1 [Cicer arietinum]
gi|502148446|ref|XP_004507167.1| PREDICTED: pumilio
homolog 2-like isoform X2 [Cicer arietinum]
gi|502148448|ref|XP_004507168.1| PREDICTED: pumilio
homolog 2-like isoform X3 [Cicer arietinum]
Length = 1030
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +3
Query: 108 EVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQESGGFLSEEDLRSHPDYLSY 287
E+NI RSGSAPPTV+ S AV LFG G + ++ G +SE++LRS P YLSY
Sbjct: 44 ELNIFRSGSAPPTVEGSLNAVGGLFGGGGAASYSDFPGTKDVNGIVSEDELRSDPAYLSY 103
Query: 288 YFSNENHNPRMPPPAI 335
Y+SN N NPR+PPP +
Sbjct: 104 YYSNVNLNPRLPPPLL 119
>gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis]
Length = 1062
Score = 82.4 bits (202), Expect = 6e-14
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Frame = +3
Query: 108 EVNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGT--SHLRVQESG-GFLSEEDLRSHPDY 278
E+N+ RSGSAPPTV+ S +AV LFG G G + Q +G GF SEE+LRS P Y
Sbjct: 44 ELNMCRSGSAPPTVEGSLSAVGGLFGGGGAGAASFAEFAGAQNNGNGFASEEELRSDPAY 103
Query: 279 LSYYFSNENHNPRMPPPAI 335
LSYY+SN N NPR+PPP +
Sbjct: 104 LSYYYSNVNLNPRLPPPLL 122