BLASTX nr result
ID: Zingiber24_contig00026022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026022
(832 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 199 1e-48
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 196 1e-47
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 173 6e-41
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 171 3e-40
ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660... 169 1e-39
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 169 1e-39
gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 167 4e-39
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 167 4e-39
gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 167 4e-39
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 164 4e-38
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 164 5e-38
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 164 5e-38
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 163 6e-38
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 162 2e-37
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 162 2e-37
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 160 4e-37
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 160 5e-37
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 160 7e-37
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616... 158 2e-36
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 158 2e-36
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 199 bits (506), Expect = 1e-48
Identities = 102/244 (41%), Positives = 149/244 (61%), Gaps = 1/244 (0%)
Frame = -1
Query: 730 RKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTS 551
R + +L +AE + + Q K+ YL +D+C+KFFH L+KRN I + + G T+S
Sbjct: 702 RGQTIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSS 761
Query: 550 LDEVAEEFVGYFQDLLGKTGQC-TPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDI 374
DE+A FV +F++ TP S G + L+ P + +++ N + +
Sbjct: 762 QDEIALAFVNHFRNFFSAHELTQTPSISICNRGPKVPTDCFAALLCPTSKQKVWNIISVM 821
Query: 373 GADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPC 194
+KAPGPDGFN F+ AW+ +GDD AAV EFF GK+LKQ NH I LIPK D +
Sbjct: 822 ANNKAPGPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQ 881
Query: 193 VTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKY 14
V +RPISCC + YK++SK+L+ R+A V+ +++ Q AF+K+R + +NI L QE+LRKY
Sbjct: 882 VNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKY 941
Query: 13 ARKR 2
ARKR
Sbjct: 942 ARKR 945
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 196 bits (497), Expect = 1e-47
Identities = 103/244 (42%), Positives = 149/244 (61%), Gaps = 1/244 (0%)
Frame = -1
Query: 730 RKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTS 551
R + +L + E L + Q K+ YL +D+C+KFFH L+KRN I + + G +T+S
Sbjct: 154 RGQTIMLRKTESLKFSQLIKNKYLLQADKCSKFFHALIKRNIHSRFIAAIRLEDGHKTSS 213
Query: 550 LDEVAEEFVGYFQDLLGKTGQC-TPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDI 374
DE+A FV +F++L TP S G + L+ P + +E+ N + +
Sbjct: 214 QDEIALAFVNHFRNLFSAHELTQTPSISICNRGPKVPIDCFAALLCPTSKQEVWNVISVM 273
Query: 373 GADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPC 194
+KAPGPDGFN F+ AW+ IGDD AV EFF GK+LKQ NH IALIPK D +
Sbjct: 274 DNNKAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQ 333
Query: 193 VTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKY 14
V +RPISCC + YK++SK+L+ R+A V+ +++ Q AF+K++ + +NI L QE+LRKY
Sbjct: 334 VNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQEILRKY 393
Query: 13 ARKR 2
A KR
Sbjct: 394 AWKR 397
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 173 bits (439), Expect = 6e-41
Identities = 94/281 (33%), Positives = 160/281 (56%), Gaps = 8/281 (2%)
Frame = -1
Query: 826 ISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRA----TLLAEAEKLFYQQRAKSVYL 659
+ ++ ++A L+ Q +LL A P + + K A LA AE+ F Q+++ ++L
Sbjct: 302 LEKRVVQAAQNLKTCQNNLL--AAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWL 359
Query: 658 KNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTP 479
K D T FFH ++ N I L Q+G + DE+ V +F++L G +
Sbjct: 360 KCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLIS 419
Query: 478 LDS----NTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWD 311
+ N+++ + R+ L ++ +IK+ F + ++K+PGPDG+ ++F+ W
Sbjct: 420 AEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWS 479
Query: 310 KIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVL 131
+G IAAV+EFF G+LL QWN T++ ++PK ++ +T++RPISCC YKVISK+L
Sbjct: 480 IVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLL 539
Query: 130 SARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYAR 8
+ RL N++ + P+Q AFVK R + EN+ LA EL++ + +
Sbjct: 540 ARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQ 580
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 171 bits (433), Expect = 3e-40
Identities = 106/281 (37%), Positives = 152/281 (54%), Gaps = 7/281 (2%)
Frame = -1
Query: 826 ISEQALRAKSVLEDAQRSLLSGAGPPN---DYEVIRKRATLLAEAEKLFYQQRAKSVYLK 656
I ++ A L AQ LL+ P N + E RK +LAEAE F+ QR++ +L+
Sbjct: 201 IEKRTKEAHDALLLAQSVLLASPCPSNAAIEAETQRKWR-ILAEAEASFFYQRSRVNWLR 259
Query: 655 NSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPL 476
D + +FH + N I L+ GD + V YFQ LG Q PL
Sbjct: 260 EGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENHCVEYFQSNLGSE-QGLPL 318
Query: 475 ----DSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDK 308
D + + S AQ+ L P ++E+IKNA F + +KA GPDGF+ +F+ A W
Sbjct: 319 FEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPI 378
Query: 307 IGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLS 128
IG + A+ EFF GKLLKQWN T++ LIPK ++ ++D+RPISC YKVISK+L+
Sbjct: 379 IGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLT 438
Query: 127 ARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARK 5
RL + + + + +Q AF+ R EN+ LA EL+ Y +K
Sbjct: 439 DRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKK 479
>ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660513 [Glycine max]
Length = 543
Score = 169 bits (428), Expect = 1e-39
Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 4/238 (1%)
Frame = -1
Query: 706 EAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEF 527
E E+ QQRAK +L+ D +FH +K + +I KL G+ T+ E+ +E
Sbjct: 308 EMEEQMLQQRAKIRWLRLGDGNNAYFHASLKAKYNQTSIKKLYMNDGNFVTTQKEIEDEI 367
Query: 526 VGYFQDLLGKTGQCTPLDSNTIS----GNHLSQAQREELVVPITNEEIKNALFDIGADKA 359
+ ++ DL+G+ + LDS I+ G L+ QR+ L+ IT+EEI AL IG KA
Sbjct: 368 MRFYGDLMGR--EEPNLDSVDINIMRKGCQLNFDQRKYLIGRITDEEIDKALKSIGDLKA 425
Query: 358 PGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYR 179
PG DG+ AKF+ AW I DF A++EFF GK+ + N + + LIPK+ + DYR
Sbjct: 426 PGIDGYGAKFFKDAWSIIKSDFTDAIREFFEKGKMYEPINTSLVILIPKNQEAKYARDYR 485
Query: 178 PISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARK 5
PISCCT YKVISKVL+ RL+ V+ S++ +Q AFV + I + I LA EL++ Y RK
Sbjct: 486 PISCCTTIYKVISKVLTTRLSRVIKSIVHQSQAAFVPGQKIHDQILLAYELIQGYERK 543
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 169 bits (428), Expect = 1e-39
Identities = 95/241 (39%), Positives = 141/241 (58%), Gaps = 8/241 (3%)
Frame = -1
Query: 712 LAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAE 533
+A E+ + +Q +K +LK D+ K FH +N+I ++ K+ G T+ D++
Sbjct: 764 IASIEEKYLKQVSKLHWLKVGDKNNKTFHRAATARAAQNSIREIQKEDGSTATTKDDIKN 823
Query: 532 EFVGYFQDLLGKTGQCTPLDSNTISGN--------HLSQAQREELVVPITNEEIKNALFD 377
E +FQ+ L Q P D I+ H S A+++ L ++ +EI+ ALF
Sbjct: 824 ETERFFQEFL----QLIPNDYEGITVEKLTSLLPYHCSPAEKDMLTASVSAKEIRGALFS 879
Query: 376 IGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSP 197
+ DK+PGPDG+ ++FY AWD IG +F+ AVK FF G L K N T +ALIPK +
Sbjct: 880 MPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAK 939
Query: 196 CVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRK 17
+ DYRPISCC V YKVISK+++ RL +V+ + + Q AFVKDR + EN+ LA EL++
Sbjct: 940 EMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKD 999
Query: 16 Y 14
Y
Sbjct: 1000 Y 1000
>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62733115|gb|AAX95232.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1324
Score = 167 bits (423), Expect = 4e-39
Identities = 107/283 (37%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Frame = -1
Query: 826 ISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSD 647
+ ++ +AK LE +RS +S + + V++ R L E +L+++QRA +L+ D
Sbjct: 747 LEKRIKKAKQALEAHRRSPISSSTASRE-AVLKYRLDKLEEQRELYWRQRANQHWLEKGD 805
Query: 646 RCTKFFHDLVKRNNKRNAIIKLTKQSG----DETTSLDEVAEEFVGYFQDLLGKTGQCTP 479
R TKFFH+ KRN I KL + G DE SL ++E F L G P
Sbjct: 806 RNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISE-----FYKQLFTAG--VP 858
Query: 478 LDSNTISGN---HLSQAQREELVVPITNEEIKNALFDIGADKAP-GPDGFNAKFYTAAWD 311
L+ + + N ++ +EL+ +T EEIK AL IG KAP G DG A FY W+
Sbjct: 859 LNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWE 918
Query: 310 KIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVL 131
+GDD + VK+F G++ WN T + LIPK + + D RPIS C V YK+ SKVL
Sbjct: 919 CVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVL 978
Query: 130 SARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKR 2
+ RL ++S ++ P Q+AFV R I +NI LA EL KR
Sbjct: 979 ANRLKPLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKR 1021
>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
Length = 825
Score = 167 bits (423), Expect = 4e-39
Identities = 107/283 (37%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Frame = -1
Query: 826 ISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSD 647
+ ++ +AK LE +RS +S + + V++ R L E +L+++QRA +L+ D
Sbjct: 248 LEKRIKKAKQALEAHRRSPISSSTASRE-AVLKYRLDKLEEQRELYWRQRANQHWLEKGD 306
Query: 646 RCTKFFHDLVKRNNKRNAIIKLTKQSG----DETTSLDEVAEEFVGYFQDLLGKTGQCTP 479
R TKFFH+ KRN I KL + G DE SL ++E F L G P
Sbjct: 307 RNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISE-----FYKQLFTAG--VP 359
Query: 478 LDSNTISGN---HLSQAQREELVVPITNEEIKNALFDIGADKAP-GPDGFNAKFYTAAWD 311
L+ + + N ++ +EL+ +T EEIK AL IG KAP G DG A FY W+
Sbjct: 360 LNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWE 419
Query: 310 KIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVL 131
+GDD + VK+F G++ WN T + LIPK + + D RPIS C V YK+ SKVL
Sbjct: 420 CVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVL 479
Query: 130 SARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKR 2
+ RL ++S ++ P Q+AFV R I +NI LA EL KR
Sbjct: 480 ANRLKPLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKR 522
>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1301
Score = 167 bits (423), Expect = 4e-39
Identities = 107/283 (37%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Frame = -1
Query: 826 ISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSD 647
+ ++ +AK LE +RS +S + + V++ R L E +L+++QRA +L+ D
Sbjct: 724 LEKRIKKAKQALEAHRRSPISSSTASRE-AVLKYRLDKLEEQRELYWRQRANQHWLEKGD 782
Query: 646 RCTKFFHDLVKRNNKRNAIIKLTKQSG----DETTSLDEVAEEFVGYFQDLLGKTGQCTP 479
R TKFFH+ KRN I KL + G DE SL ++E F L G P
Sbjct: 783 RNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISE-----FYKQLFTAG--VP 835
Query: 478 LDSNTISGN---HLSQAQREELVVPITNEEIKNALFDIGADKAP-GPDGFNAKFYTAAWD 311
L+ + + N ++ +EL+ +T EEIK AL IG KAP G DG A FY W+
Sbjct: 836 LNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWE 895
Query: 310 KIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVL 131
+GDD + VK+F G++ WN T + LIPK + + D RPIS C V YK+ SKVL
Sbjct: 896 CVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVL 955
Query: 130 SARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKR 2
+ RL ++S ++ P Q+AFV R I +NI LA EL KR
Sbjct: 956 ANRLKPLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKR 998
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 164 bits (415), Expect = 4e-38
Identities = 92/245 (37%), Positives = 141/245 (57%), Gaps = 2/245 (0%)
Frame = -1
Query: 733 IRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETT 554
+RK +T+ ++ +Q+++ +L D +KFF +K RN I+ L GD+ T
Sbjct: 336 LRKWSTI----DESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLT 391
Query: 553 SLDEVAEEFVGYFQDLLG-KTGQCTPLDSNTIS-GNHLSQAQREELVVPITNEEIKNALF 380
E+ E +++ LLG + Q +D + + G LS +LV PIT +EI AL
Sbjct: 392 ENTEIQNEICNFYRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALA 451
Query: 379 DIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHS 200
DI KAPG DGFN+ F+ +W I + + +FF +G + K N T++ LIPK D +
Sbjct: 452 DIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEA 511
Query: 199 PCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLR 20
DYRPI+CC+ YK+ISK+L+ RL V++ ++D AQ F+ +R IG+NI LA EL+R
Sbjct: 512 KHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIR 571
Query: 19 KYARK 5
Y R+
Sbjct: 572 GYNRR 576
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 164 bits (414), Expect = 5e-38
Identities = 90/239 (37%), Positives = 136/239 (56%), Gaps = 5/239 (2%)
Frame = -1
Query: 715 LLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVA 536
+L AE+ F++Q+++ + D TK+FH + N N+I L +G S + +
Sbjct: 343 ILTAAEESFFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGIL 402
Query: 535 EEFVGYFQDLLGKTGQCTPL-----DSNTISGNHLSQAQREELVVPITNEEIKNALFDIG 371
+ YF LLG + P D N + S AQ EL +NE+I+ ALF +
Sbjct: 403 DLCASYFGSLLGD--EVDPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLP 460
Query: 370 ADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCV 191
+K+ GPDGF A+F+ +W +G + A+KEFF G LLKQWN T+I LIPK + C
Sbjct: 461 RNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCT 520
Query: 190 TDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKY 14
+D+RPISC YKVI+++L+ RL ++S ++ AQ AF+ RS+ EN+ LA +L+ Y
Sbjct: 521 SDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGY 579
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 164 bits (414), Expect = 5e-38
Identities = 89/260 (34%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Frame = -1
Query: 769 LSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAI 590
+SG G + E I+ + E + F+QQR K + D +++F KR ++N I
Sbjct: 320 ISGGGKLD--EEIKDESIRKLEVQLKFWQQRVKCKWKAWEDTNSRWFFRKAKRRKQKNEI 377
Query: 589 IKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPLDSNTISGNHL----SQAQREEL 422
+ + +G +S ++ EF+GYF D+ + HL QRE+L
Sbjct: 378 LVIKNSAGKWVSSKQDIQGEFLGYFADIFQGSQHSQEYWEELDGIRHLIPQIDLMQREDL 437
Query: 421 VVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQW 242
+ P+T EE++N +F +G+ KAPGPDG A FY W +G+D AV FF G +L++W
Sbjct: 438 IKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEW 497
Query: 241 NHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDR 62
N T+I LIPK + +RPIS C V YK+ISK+++ RL ++ S++ P Q AFV R
Sbjct: 498 NQTNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGR 557
Query: 61 SIGENIHLAQELLRKYARKR 2
I +N +A E++ +++
Sbjct: 558 LISDNCLIAHEVVNLIKQRK 577
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 163 bits (413), Expect = 6e-38
Identities = 87/234 (37%), Positives = 134/234 (57%), Gaps = 2/234 (0%)
Frame = -1
Query: 700 EKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVG 521
E QQ+++ +L+ D +K F VK + N I L + G DEV EE +
Sbjct: 340 EDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILE 399
Query: 520 YFQDLLG-KTGQCTPLDSNTISGNHLSQAQ-REELVVPITNEEIKNALFDIGADKAPGPD 347
+++ LLG + +D NT+ G AQ +E L+ + + EI AL IG DKAPG D
Sbjct: 400 FYKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLD 459
Query: 346 GFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISC 167
GFNA F+ +W I + A ++EFF++ ++ + N + L+PK H+ V ++RPI+C
Sbjct: 460 GFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIAC 519
Query: 166 CTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARK 5
CTV YK+ISK+L+ R+ ++ +++ AQ F+ R I +NI LA EL+R Y RK
Sbjct: 520 CTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRK 573
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 162 bits (409), Expect = 2e-37
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Frame = -1
Query: 730 RKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTS 551
+++ LL+ AE+ F+ QR++ + D T +FH +V N I L +G S
Sbjct: 198 QRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDS 257
Query: 550 LDEVAEEFVGYFQDLLGKTGQCTPL---DSNTISGNHLSQAQREELVVPITNEEIKNALF 380
+ + V Y++ LLG + D N + SQ Q EL T++EIK A
Sbjct: 258 QQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFK 317
Query: 379 DIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHS 200
+ +K GPDG++ +F+ W IG + +AA+ EFF G+LLKQWN T++ LIPK+ ++
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377
Query: 199 PCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLR 20
++++RPISC YKVISK+L++RL ++S+++ +Q AF+ RS+ EN+ LA E++
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437
Query: 19 KYAR 8
Y R
Sbjct: 438 GYNR 441
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 162 bits (409), Expect = 2e-37
Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 3/244 (1%)
Frame = -1
Query: 730 RKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTS 551
+++ LL+ AE+ F+ QR++ + D T +FH +V N I L +G S
Sbjct: 198 QRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDS 257
Query: 550 LDEVAEEFVGYFQDLLGKTGQCTPL---DSNTISGNHLSQAQREELVVPITNEEIKNALF 380
+ + V Y++ LLG + D N + SQ Q EL T++EIK A
Sbjct: 258 QQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFK 317
Query: 379 DIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHS 200
+ +K GPDG++ +F+ W IG + +AA+ EFF G+LLKQWN T++ LIPK+ ++
Sbjct: 318 SLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNA 377
Query: 199 PCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLR 20
++++RPISC YKVISK+L++RL ++S+++ +Q AF+ RS+ EN+ LA E++
Sbjct: 378 CTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVH 437
Query: 19 KYAR 8
Y R
Sbjct: 438 GYNR 441
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 160 bits (406), Expect = 4e-37
Identities = 87/234 (37%), Positives = 139/234 (59%), Gaps = 2/234 (0%)
Frame = -1
Query: 700 EKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVG 521
E+ + Q++++ +++ D TKFFH K +N I L + G + + EE G
Sbjct: 23 EEKIWMQKSRANWIQLGDSNTKFFHAYAKERRCQNNIKFLITEDGTRIDKHNLIKEEIRG 82
Query: 520 YFQDLLGKTGQCTPL-DSNTIS-GNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPD 347
++ L+G + P+ D N + G LSQ Q++ L T E+KN LF + + KAPG D
Sbjct: 83 FYLKLMGSSVDSLPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAPGID 142
Query: 346 GFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISC 167
G+N F+ +W+ IGD I A+ +FF G + K N T + L+PK + V ++RPI+C
Sbjct: 143 GYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIAC 202
Query: 166 CTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARK 5
C+V YK+ISK+L++R+ V++S++ Q AFVK R I +NI L+ EL++ Y+RK
Sbjct: 203 CSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRK 256
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 160 bits (405), Expect = 5e-37
Identities = 92/241 (38%), Positives = 136/241 (56%), Gaps = 8/241 (3%)
Frame = -1
Query: 712 LAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAE 533
+A E+ + +Q++K + + D+ TK FH N I ++ G T DE+
Sbjct: 349 VAILEEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKA 408
Query: 532 EFVGYFQDLLGKTGQCTPLDSNTISGNHLSQ--------AQREELVVPITNEEIKNALFD 377
E +F++ L Q P D ++ L Q A ++ L+ P+T EEI+ LF
Sbjct: 409 EAERFFREFL----QLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFR 464
Query: 376 IGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSP 197
+ +DK+PGPDG+ ++F+ A W+ IGD+F AV+ FF G L K N T +ALIPK +
Sbjct: 465 MPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAR 524
Query: 196 CVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRK 17
+ DYRPISCC V YKVISK+++ RL V+ + Q AFVKDR + EN+ LA EL++
Sbjct: 525 EMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKD 584
Query: 16 Y 14
Y
Sbjct: 585 Y 585
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 160 bits (404), Expect = 7e-37
Identities = 88/235 (37%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Frame = -1
Query: 700 EKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVG 521
E+ F+Q++++ ++++N DR TK+FH K +N I KL + G E TS +++
Sbjct: 332 EEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEA 391
Query: 520 YFQDLLGKTG---------QCTPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDIGA 368
YF+ L TPL S+ ++ N L+ PIT EE++ A F I
Sbjct: 392 YFKKLFASEDVGYTVEELENLTPLVSDQMNNN---------LLAPITKEEVQRATFSINP 442
Query: 367 DKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVT 188
K PGPDG N Y W+ +GD V+ FF G + + N T+I LIPK + +T
Sbjct: 443 HKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMT 502
Query: 187 DYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELL 23
D+RPIS C V YKVI K+++ RL ++ SL+ Q AFVK R I +NI +A ELL
Sbjct: 503 DFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELL 557
>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
Length = 977
Score = 158 bits (400), Expect = 2e-36
Identities = 84/243 (34%), Positives = 135/243 (55%)
Frame = -1
Query: 730 RKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTS 551
R+R L + ++F++QRAKS++LK +R T +FH ++N+ L GD ++
Sbjct: 308 RQRYNELLHSHEVFWKQRAKSLWLKEGNRNTHYFHASASARRRQNSFDSLRNNQGDWCSN 367
Query: 550 LDEVAEEFVGYFQDLLGKTGQCTPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDIG 371
+EV V YFQ L +G+C + ++ L+ P ++ E+K ALF++
Sbjct: 368 PEEVDALIVDYFQGLF-TSGRCHTAEVTQCVDTRITNEHNAMLLAPFSDIEVKEALFEMH 426
Query: 370 ADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCV 191
+K+PGPDG N FY W +G D I+A +F H N TSI LIPK +
Sbjct: 427 LEKSPGPDGMNPTFYQKFWHIVGKDVISACLKFIHDCSFPVGLNDTSIVLIPKKHKPELL 486
Query: 190 TDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYA 11
+D RPI+ C V YK+ISK+L+ R+ +V+ ++ +Q AF+ R+I +NI ++ E++
Sbjct: 487 SDTRPIALCNVLYKIISKMLANRMKSVLDVVISDSQSAFIPGRAITDNIIISAEIMHFLK 546
Query: 10 RKR 2
RKR
Sbjct: 547 RKR 549
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 158 bits (400), Expect = 2e-36
Identities = 94/275 (34%), Positives = 136/275 (49%)
Frame = -1
Query: 826 ISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSD 647
+ ++ + K LE +R +S + EV+R R L + ++++QRA + +L D
Sbjct: 547 LEKRVKKVKKELETCRRQPISRDQVVRE-EVLRYRLEKLEQQVDIYWKQRAHTNWLNKGD 605
Query: 646 RCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPLDSN 467
R T FFH +RN I KL ++ G ++ + +F+ L G
Sbjct: 606 RNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLL 665
Query: 466 TISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIA 287
+ +S A E L T EE+K AL IG KAPGPDG A FY A WD +G+
Sbjct: 666 DVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTD 725
Query: 286 AVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVM 107
V E G + + WN +I LIPK + D RPIS C V YK++SKVL+ RL ++
Sbjct: 726 EVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKIL 785
Query: 106 SSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKR 2
++ PAQ AFV R I +NI +A E+ KR
Sbjct: 786 PDVISPAQSAFVPGRLISDNILIADEMTHYMRNKR 820