BLASTX nr result
ID: Zingiber24_contig00026004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00026004
(257 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003523389.1| PREDICTED: transcription factor SPEECHLESS-l... 70 4e-10
ref|XP_003527974.1| PREDICTED: transcription factor SPEECHLESS-l... 68 1e-09
ref|XP_002267745.1| PREDICTED: transcription factor SPEECHLESS [... 67 2e-09
ref|XP_002513589.1| DNA binding protein, putative [Ricinus commu... 64 2e-08
gb|ESW09561.1| hypothetical protein PHAVU_009G137400g [Phaseolus... 64 3e-08
gb|EOY23456.1| Basic helix-loop-helix DNA-binding superfamily pr... 63 3e-08
ref|XP_003602194.1| Transcription factor SPEECHLESS [Medicago tr... 61 1e-07
ref|XP_004502611.1| PREDICTED: transcription factor SPEECHLESS-l... 61 2e-07
gb|ADE77039.1| unknown [Picea sitchensis] 60 2e-07
ref|XP_006280670.1| hypothetical protein CARUB_v10026630mg [Caps... 60 3e-07
ref|XP_004309160.1| PREDICTED: transcription factor SPEECHLESS-l... 60 4e-07
ref|NP_200133.2| transcription factor SPEECHLESS [Arabidopsis th... 59 5e-07
dbj|BAB09783.1| unnamed protein product [Arabidopsis thaliana] 59 5e-07
ref|XP_006422119.1| hypothetical protein CICLE_v10007150mg [Citr... 58 1e-06
ref|XP_002331842.1| predicted protein [Populus trichocarpa] gi|5... 57 2e-06
ref|XP_002865959.1| predicted protein [Arabidopsis lyrata subsp.... 57 3e-06
ref|XP_002317746.1| hypothetical protein POPTR_0012s01370g [Popu... 57 3e-06
ref|NP_001132879.1| putative HLH DNA-binding domain superfamily ... 57 3e-06
ref|XP_006401728.1| hypothetical protein EUTSA_v10013877mg [Eutr... 56 4e-06
ref|XP_002453634.1| hypothetical protein SORBIDRAFT_04g009390 [S... 56 4e-06
>ref|XP_003523389.1| PREDICTED: transcription factor SPEECHLESS-like [Glycine max]
Length = 344
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = -3
Query: 237 ASIEGSNFSPKVTLVSPQVGSNSRPLESD---EGQAPKKRKLDSPRAPADLGNQDGQQKT 67
A++ N LVS + S+S PL+S+ E + KR+ +P P + N DGQQK
Sbjct: 49 AAVSKDNNEDVSRLVSQKSTSSSAPLDSETELETSSKTKRQKLTPTTPEE-ANPDGQQKM 107
Query: 66 THITVERNRRKQMNEHLSVLRS 1
+HITVERNRRKQMNEHL+VLRS
Sbjct: 108 SHITVERNRRKQMNEHLTVLRS 129
>ref|XP_003527974.1| PREDICTED: transcription factor SPEECHLESS-like [Glycine max]
Length = 349
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = -3
Query: 198 LVSPQVGSNSRPLESD---EGQAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQM 28
LVS + S+S PL+S+ E KR+ +P P + N DGQQK +HITVERNRRKQM
Sbjct: 66 LVSQKSTSSSAPLDSETELETSPKTKRQKLTPTTPEE-ANPDGQQKMSHITVERNRRKQM 124
Query: 27 NEHLSVLRS 1
NEHL+VLRS
Sbjct: 125 NEHLTVLRS 133
>ref|XP_002267745.1| PREDICTED: transcription factor SPEECHLESS [Vitis vinifera]
gi|302143687|emb|CBI22548.3| unnamed protein product
[Vitis vinifera]
Length = 338
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -3
Query: 198 LVSPQVGSNSRPLESD-EGQAPKKRKLDSPRAP--ADLGNQDGQQKTTHITVERNRRKQM 28
LVS + S+S ES+ E +A KRK AP ++ GN DGQQ+ +HITVERNRRKQM
Sbjct: 63 LVSQKSTSSSALQESETELEASPKRKRPKLAAPTSSEEGNPDGQQRVSHITVERNRRKQM 122
Query: 27 NEHLSVLRS 1
NEHLSVLRS
Sbjct: 123 NEHLSVLRS 131
>ref|XP_002513589.1| DNA binding protein, putative [Ricinus communis]
gi|223547497|gb|EEF48992.1| DNA binding protein,
putative [Ricinus communis]
Length = 336
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = -3
Query: 198 LVSPQVGSNSRPLESDEG--QAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQMN 25
LVS + S+S LES+ +PK ++ + A ++ N DGQQ+ +HITVERNRRKQMN
Sbjct: 60 LVSQKSTSSSAILESETELETSPKNKRQKTGIASSEEINPDGQQRMSHITVERNRRKQMN 119
Query: 24 EHLSVLRS 1
EHLSVLRS
Sbjct: 120 EHLSVLRS 127
>gb|ESW09561.1| hypothetical protein PHAVU_009G137400g [Phaseolus vulgaris]
Length = 338
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Frame = -3
Query: 198 LVSPQVGSNSRPLESDEGQ---APK-KRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQ 31
LVS + S+S P + E + +PK KR+ P P + N DGQQ+ +HITVERNRRKQ
Sbjct: 58 LVSQKSTSSSAPQDYSETEFETSPKTKRQKLIPTTPEE-SNPDGQQRMSHITVERNRRKQ 116
Query: 30 MNEHLSVLRS 1
MNEHLSVLRS
Sbjct: 117 MNEHLSVLRS 126
>gb|EOY23456.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
cacao]
Length = 331
Score = 63.2 bits (152), Expect = 3e-08
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -3
Query: 198 LVSPQVGSNSRPLESD-EGQAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQMNE 22
LVS + S+S ES+ E + P K K A ++ N DGQQ+ +HITVERNRRKQMNE
Sbjct: 60 LVSQKSTSSSAQQESETEPETPPKSKRQK-LASSEETNPDGQQRMSHITVERNRRKQMNE 118
Query: 21 HLSVLRS 1
HLSVLRS
Sbjct: 119 HLSVLRS 125
>ref|XP_003602194.1| Transcription factor SPEECHLESS [Medicago truncatula]
gi|355491242|gb|AES72445.1| Transcription factor
SPEECHLESS [Medicago truncatula]
Length = 329
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = -3
Query: 243 ERASIEGSNFSPKVTLVSPQVGSNSRPLESDEGQAPKKR--KLDSPRAPADLGNQDGQQK 70
E A+ + + + LVS + S+ + E++ PK++ KL + + DGQQ+
Sbjct: 41 EAATPKENEVTSTSRLVSQKSTSSLQDSETELETEPKRKRQKLTPTLLEEQINSVDGQQR 100
Query: 69 TTHITVERNRRKQMNEHLSVLRS 1
+HITVERNRRKQMNEHLSVLRS
Sbjct: 101 VSHITVERNRRKQMNEHLSVLRS 123
>ref|XP_004502611.1| PREDICTED: transcription factor SPEECHLESS-like [Cicer arietinum]
Length = 345
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -3
Query: 159 ESDEGQAPK-KRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQMNEHLSVLRS 1
E++ PK KR+ +P + N DGQQK +HITVERNRRKQMNEHLSVLRS
Sbjct: 78 ETELETCPKSKRQKLTPTLVEEQINSDGQQKVSHITVERNRRKQMNEHLSVLRS 131
>gb|ADE77039.1| unknown [Picea sitchensis]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = -3
Query: 159 ESDEG-QAPKKRKLDS-PRAPADLGNQDGQQKTTHITVERNRRKQMNEHLSVLRS 1
E+D+G + PK ++L + A +D DGQQ+ THI VERNRRKQMNEHL+VLRS
Sbjct: 242 ETDQGLEKPKHKRLKALVTATSDQAEGDGQQRMTHIAVERNRRKQMNEHLAVLRS 296
>ref|XP_006280670.1| hypothetical protein CARUB_v10026630mg [Capsella rubella]
gi|482549374|gb|EOA13568.1| hypothetical protein
CARUB_v10026630mg [Capsella rubella]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Frame = -3
Query: 198 LVSPQVGSNSRP------LESDEGQAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRR 37
LV Q NS P LE+ + + ++ + + G QDGQQK +H+TVERNRR
Sbjct: 55 LVKDQDYENSFPKRKKQRLETGKDEDEEEEDAEGEGEGEEDGKQDGQQKMSHVTVERNRR 114
Query: 36 KQMNEHLSVLRS 1
KQMNEHL+VLRS
Sbjct: 115 KQMNEHLTVLRS 126
>ref|XP_004309160.1| PREDICTED: transcription factor SPEECHLESS-like [Fragaria vesca
subsp. vesca]
Length = 366
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Frame = -3
Query: 195 VSPQVGSNSRPLESDEGQAPKKRKLDSPRAPADLGNQ--DGQQKTTHITVERNRRKQMNE 22
VSP++ ++ +P K+ KL +P G+ DGQQ+ +HITVERNRRKQMNE
Sbjct: 68 VSPELETSPKP--------SKRVKLSKEASPGRTGSNSDDGQQRMSHITVERNRRKQMNE 119
Query: 21 HLSVLRS 1
HL+VLRS
Sbjct: 120 HLTVLRS 126
>ref|NP_200133.2| transcription factor SPEECHLESS [Arabidopsis thaliana]
gi|75294400|sp|Q700C7.1|SPCH_ARATH RecName:
Full=Transcription factor SPEECHLESS; AltName:
Full=Basic helix-loop-helix protein 98; Short=AtbHLH98;
Short=bHLH 98; AltName: Full=Transcription factor EN 19;
AltName: Full=bHLH transcription factor bHLH098
gi|45935051|gb|AAS79560.1| basic helix-loop-helix family
protein [Arabidopsis thaliana]
gi|46367490|emb|CAG25871.1| hypothetical protein
[Arabidopsis thaliana] gi|112889216|gb|ABI26170.1|
SPEECHLESS [Arabidopsis thaliana]
gi|332008940|gb|AED96323.1| transcription factor
SPEECHLESS [Arabidopsis thaliana]
Length = 364
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 17/95 (17%)
Frame = -3
Query: 234 SIEGSNFSPKVTLVSPQVGS-NSRPLESD---EGQAPKKRKL-------------DSPRA 106
S+EG+ +P+ G+ +S+ L D E +PK++K D
Sbjct: 30 SLEGAGEISPTAASTPKDGTTSSKELVKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGE 89
Query: 105 PADLGNQDGQQKTTHITVERNRRKQMNEHLSVLRS 1
+ QDGQQK +H+TVERNRRKQMNEHL+VLRS
Sbjct: 90 AEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRS 124
>dbj|BAB09783.1| unnamed protein product [Arabidopsis thaliana]
Length = 294
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 17/95 (17%)
Frame = -3
Query: 234 SIEGSNFSPKVTLVSPQVGS-NSRPLESD---EGQAPKKRKL-------------DSPRA 106
S+EG+ +P+ G+ +S+ L D E +PK++K D
Sbjct: 30 SLEGAGEISPTAASTPKDGTTSSKELVKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGE 89
Query: 105 PADLGNQDGQQKTTHITVERNRRKQMNEHLSVLRS 1
+ QDGQQK +H+TVERNRRKQMNEHL+VLRS
Sbjct: 90 AEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRS 124
>ref|XP_006422119.1| hypothetical protein CICLE_v10007150mg [Citrus clementina]
gi|568875170|ref|XP_006490681.1| PREDICTED:
transcription factor SPEECHLESS-like [Citrus sinensis]
gi|557523992|gb|ESR35359.1| hypothetical protein
CICLE_v10007150mg [Citrus clementina]
Length = 337
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Frame = -3
Query: 228 EGSNFSPKVTLVSPQVGSNSRPLESDEGQA-----PKKRKLDSPRAPA-----DLGNQDG 79
E + + LVS + S+S ESDE PK ++ + A + N DG
Sbjct: 41 EAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDG 100
Query: 78 QQKTTHITVERNRRKQMNEHLSVLRS 1
QQ+ +HITVERNRRKQMNE+LSVLRS
Sbjct: 101 QQRMSHITVERNRRKQMNENLSVLRS 126
>ref|XP_002331842.1| predicted protein [Populus trichocarpa]
gi|566206145|ref|XP_006374334.1| hypothetical protein
POPTR_0015s06160g [Populus trichocarpa]
gi|550322093|gb|ERP52131.1| hypothetical protein
POPTR_0015s06160g [Populus trichocarpa]
Length = 303
Score = 57.0 bits (136), Expect = 2e-06
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 12/86 (13%)
Frame = -3
Query: 222 SNFSPKVTLVSPQVGSNSRPLES-DEGQ-----APKKRKLDSPRAPADLG------NQDG 79
++F P + L +V S+S L+ DE +PK ++ + A + N DG
Sbjct: 37 TDFPPVIPL--DEVSSSSSALQDFDETNNELETSPKSKRQKIAASAAAIASSDQEVNPDG 94
Query: 78 QQKTTHITVERNRRKQMNEHLSVLRS 1
QQ+ +HITVERNRRKQMNEHLSVLRS
Sbjct: 95 QQRISHITVERNRRKQMNEHLSVLRS 120
>ref|XP_002865959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311794|gb|EFH42218.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 366
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = -3
Query: 198 LVSPQVGSNSRP------LESDEGQAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRR 37
LV Q NS P LE+ + + ++ D + QDGQ K +H+TVERNRR
Sbjct: 55 LVKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGEGEGEEENKQDGQHKMSHVTVERNRR 114
Query: 36 KQMNEHLSVLRS 1
KQMNEHL+VLRS
Sbjct: 115 KQMNEHLTVLRS 126
>ref|XP_002317746.1| hypothetical protein POPTR_0012s01370g [Populus trichocarpa]
gi|222858419|gb|EEE95966.1| hypothetical protein
POPTR_0012s01370g [Populus trichocarpa]
Length = 323
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -3
Query: 90 NQDGQQKTTHITVERNRRKQMNEHLSVLRS 1
N DGQQ+ +HITVERNRRKQMNEHLSVLRS
Sbjct: 84 NPDGQQRMSHITVERNRRKQMNEHLSVLRS 113
>ref|NP_001132879.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194695644|gb|ACF81906.1| unknown [Zea mays]
gi|413925943|gb|AFW65875.1| putative HLH DNA-binding
domain superfamily protein [Zea mays]
Length = 375
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = -3
Query: 177 SNSRPLESDE---GQAPKKRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQMNEHLSVL 7
+NSR DE G AP ++K A +D +G K +HITVERNRRKQMNEHL+VL
Sbjct: 77 NNSRRRTGDEEKGGSAPAQKKHKGSSAVSD---DEGAAKMSHITVERNRRKQMNEHLAVL 133
Query: 6 RS 1
RS
Sbjct: 134 RS 135
>ref|XP_006401728.1| hypothetical protein EUTSA_v10013877mg [Eutrema salsugineum]
gi|312282859|dbj|BAJ34295.1| unnamed protein product
[Thellungiella halophila] gi|557102818|gb|ESQ43181.1|
hypothetical protein EUTSA_v10013877mg [Eutrema
salsugineum]
Length = 368
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -3
Query: 87 QDGQQKTTHITVERNRRKQMNEHLSVLRS 1
QDGQQK +H+TVERNRRKQMNEHL+VLRS
Sbjct: 100 QDGQQKMSHVTVERNRRKQMNEHLTVLRS 128
>ref|XP_002453634.1| hypothetical protein SORBIDRAFT_04g009390 [Sorghum bicolor]
gi|241933465|gb|EES06610.1| hypothetical protein
SORBIDRAFT_04g009390 [Sorghum bicolor]
Length = 398
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = -3
Query: 189 PQVGSNSRPLESDEGQ----APKKRKLDSPRAPADLGNQDGQQKTTHITVERNRRKQMNE 22
P V R + ++G AP ++K D +G+ K +HITVERNRRKQMNE
Sbjct: 70 PSVNCRKRTGDEEKGSGGGGAPVQKKHKGSAVTDDAAADEGEAKMSHITVERNRRKQMNE 129
Query: 21 HLSVLRS 1
HL+VLRS
Sbjct: 130 HLTVLRS 136