BLASTX nr result

ID: Zingiber24_contig00026003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00026003
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ00637.1| hypothetical protein PRUPE_ppa026667mg, partial [...   135   4e-30
ref|YP_008992291.1| hypothetical protein Salmi_Mp025 (mitochondr...    58   2e-16
ref|XP_006380079.1| hypothetical protein POPTR_0008s21690g, part...    84   3e-14
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    60   3e-14
gb|EXB88261.1| hypothetical protein L484_020327 [Morus notabilis]      60   2e-07
ref|XP_006829253.1| hypothetical protein AMTR_s00001p00272620 [A...    59   5e-07

>gb|EMJ00637.1| hypothetical protein PRUPE_ppa026667mg, partial [Prunus persica]
          Length = 181

 Score =  135 bits (341), Expect = 4e-30
 Identities = 78/113 (69%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = +3

Query: 12  TVKSE---PSRSSFLVGRKHTSSVRCVIPLCFYLAGGQLTGRELRFARPAGGLVLILCDN 182
           TVKSE    +  SFL GRKHTSSVRCVI L  + + GQ           AGG VLILCDN
Sbjct: 64  TVKSELNLVALLSFLAGRKHTSSVRCVILLYNFNSPGQ----------QAGG-VLILCDN 112

Query: 183 TTERVALLVGQQCDNTPEKAALLCNMLWSQRPYEVVMSFTRSKPGPRAVRRIG 341
           TTERVALL GQ CD+TPEK AL CNMLWSQRPYEVVMSF RSKPGPR VR+IG
Sbjct: 113 TTERVALLGGQLCDSTPEKTALSCNMLWSQRPYEVVMSFMRSKPGPRMVRKIG 165


>ref|YP_008992291.1| hypothetical protein Salmi_Mp025 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292266|gb|AGU16558.1| hypothetical
           protein Salmi_Mp025 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 121

 Score = 58.2 bits (139), Expect(2) = 2e-16
 Identities = 34/47 (72%), Positives = 36/47 (76%), Gaps = 3/47 (6%)
 Frame = -3

Query: 259 MLHKSAAFSGVLSHCCPTRRATRSVVLSHKISTSPPA---GRANLSS 128
           ML +SAAFS VLSH CP RRATRSVVLSHKIST PPA   G +  SS
Sbjct: 1   MLDESAAFSVVLSHSCPPRRATRSVVLSHKIST-PPACWPGESKFSS 46



 Score = 53.1 bits (126), Expect(2) = 2e-16
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 99  KNTVESRNARCWCASCPRGKKSEKV 25
           KNTVESRNARCWCASC +GKKS+KV
Sbjct: 56  KNTVESRNARCWCASCSQGKKSDKV 80


>ref|XP_006380079.1| hypothetical protein POPTR_0008s21690g, partial [Populus
           trichocarpa] gi|550333600|gb|ERP57876.1| hypothetical
           protein POPTR_0008s21690g, partial [Populus trichocarpa]
          Length = 207

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/64 (73%), Positives = 49/64 (76%)
 Frame = +3

Query: 150 AGGLVLILCDNTTERVALLVGQQCDNTPEKAALLCNMLWSQRPYEVVMSFTRSKPGPRAV 329
           AGG VL LCDNTTE+VALL  Q CD   EKA L C+MLWSQ PYEVVMSFTR KP  RAV
Sbjct: 70  AGG-VLNLCDNTTEQVALLGEQLCDT--EKATLSCHMLWSQCPYEVVMSFTRPKPSLRAV 126

Query: 330 RRIG 341
           R IG
Sbjct: 127 RMIG 130


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 59.7 bits (143), Expect(2) = 3e-14
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
 Frame = -3

Query: 262 SMLHKSAAFSGVLSHCCPTRRATRSVVLSHKISTSPPA--GRANLSS 128
           +ML++SAAFS V SH CP RRATRSVVLSHKIST P +  G + LSS
Sbjct: 193 AMLNESAAFSVVFSHSCPPRRATRSVVLSHKISTPPASWPGESKLSS 239



 Score = 43.9 bits (102), Expect(2) = 3e-14
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -1

Query: 99  KNTVESRNARCWCASCP 49
           KNTVESRNARCWCASCP
Sbjct: 249 KNTVESRNARCWCASCP 265


>gb|EXB88261.1| hypothetical protein L484_020327 [Morus notabilis]
          Length = 123

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 258 MLWSQRPYEVVMSFTRSKPGPRAVRRIG 341
           MLWSQRPYEVVMSFTRSKPGPRAVR+IG
Sbjct: 1   MLWSQRPYEVVMSFTRSKPGPRAVRKIG 28


>ref|XP_006829253.1| hypothetical protein AMTR_s00001p00272620 [Amborella trichopoda]
           gi|548834232|gb|ERM96669.1| hypothetical protein
           AMTR_s00001p00272620 [Amborella trichopoda]
          Length = 70

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   HAANSQIRTFSLFFPRGQEAHQQRALRDSTVF 97
           HAANSQI T SLFFPRGQEAHQQ  LRDSTVF
Sbjct: 32  HAANSQILTLSLFFPRGQEAHQQHVLRDSTVF 63


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