BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00025672
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
gb|ESW35794.1| hypothetical protein PHAVU_001G265200g [Phaseolus...    98   1e-18
ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002321108.2| hypothetical protein POPTR_0014s14700g [Popu...    89   5e-16
ref|XP_006492991.1| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16
gb|EOY05094.1| Pentatricopeptide repeat-containing protein, puta...    88   1e-15
ref|XP_006855721.1| hypothetical protein AMTR_s00044p00151840 [A...    87   2e-15
ref|XP_006421046.1| hypothetical protein CICLE_v10004784mg [Citr...    87   3e-15
ref|XP_002516403.1| pentatricopeptide repeat-containing protein,...    87   3e-15
gb|EXC14264.1| hypothetical protein L484_021763 [Morus notabilis]      86   5e-15
gb|EMJ24063.1| hypothetical protein PRUPE_ppa004279mg [Prunus pe...    85   9e-15
ref|XP_004298231.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|NP_193155.4| pentatricopeptide repeat-containing protein [Ar...    70   2e-10
emb|CAB10198.1| salt-inducible protein homolog [Arabidopsis thal...    70   2e-10
ref|XP_002868305.1| binding protein [Arabidopsis lyrata subsp. l...    69   5e-10
ref|XP_006283572.1| hypothetical protein CARUB_v10004636mg [Caps...    67   2e-09
ref|XP_006414780.1| hypothetical protein EUTSA_v10027442mg [Eutr...    66   4e-09

>ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Glycine max]
          Length = 509

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 46/88 (52%), Positives = 61/88 (69%)
 Frame = +2

Query: 5   VCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLK 184
           +  ++PD+IT GI FDA  IG+DG   LE WRR  YL  VV I+TD LVL+AFGKG FLK
Sbjct: 409 IYRVQPDIITIGILFDATRIGFDGSGALETWRRMGYLYRVVEIKTDSLVLTAFGKGHFLK 468

Query: 185 LCEKKYITVHSRQKQKKIWRYSDVIRLV 268
            CE+ Y ++H   +++K W Y D+I L+
Sbjct: 469 SCEEVYSSLHPEDRKRKTWTYHDLIALL 496


>gb|ESW35794.1| hypothetical protein PHAVU_001G265200g [Phaseolus vulgaris]
          Length = 496

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 62/89 (69%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           R+  + PD++T GI  DA  IG+DG   LE WRR  YL+ VV ++TD LVL+AFGKG FL
Sbjct: 407 RINRLGPDIVTIGIVLDASRIGFDGRGALESWRRMGYLDRVVELKTDSLVLTAFGKGHFL 466

Query: 182 KLCEKKYITVHSRQKQKKIWRYSDVIRLV 268
           K CE+ Y ++H   +++K W Y+D+I L+
Sbjct: 467 KSCEEVYTSLHPEDRERKKWTYNDLIALL 495


>ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 506

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/88 (50%), Positives = 60/88 (68%)
 Frame = +2

Query: 5   VCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLK 184
           +  ++PD+IT GI FDA  IG+DG   LE WRR  YL  VV ++TD LVL+AFGKG FLK
Sbjct: 407 IYRVQPDIITIGILFDATRIGFDGSGALETWRRMGYLYRVVEMKTDSLVLTAFGKGHFLK 466

Query: 185 LCEKKYITVHSRQKQKKIWRYSDVIRLV 268
            CE+ Y ++H   +++K   Y D+I L+
Sbjct: 467 SCEEVYSSLHPEDRKRKTCTYHDLIPLL 494


>ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Vitis vinifera]
          Length = 581

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 41/85 (48%), Positives = 61/85 (71%)
 Frame = +2

Query: 11  NIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLC 190
           ++KPD++T GI FDA  IG++G   L  WRR+ +L++ V + TD LVLSAFGKG+FL+ C
Sbjct: 439 HVKPDIVTVGILFDANRIGFNGTMALNTWRRTGFLDEAVEMNTDPLVLSAFGKGNFLQSC 498

Query: 191 EKKYITVHSRQKQKKIWRYSDVIRL 265
           E+ Y ++    ++KKIW Y ++I L
Sbjct: 499 EEMYSSLEPEARKKKIWTYQNLIDL 523


>ref|XP_002321108.2| hypothetical protein POPTR_0014s14700g [Populus trichocarpa]
           gi|550324215|gb|EEE99423.2| hypothetical protein
           POPTR_0014s14700g [Populus trichocarpa]
          Length = 508

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/85 (49%), Positives = 57/85 (67%)
 Frame = +2

Query: 14  IKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLCE 193
           ++PD++T+GI FDA +IG+DG   LE WR+   L   V + TD L LSAFGKGSFL+ CE
Sbjct: 419 VEPDIVTFGILFDAEEIGFDGKECLEMWRKMGLLYRRVEMNTDPLALSAFGKGSFLRSCE 478

Query: 194 KKYITVHSRQKQKKIWRYSDVIRLV 268
           + Y ++    ++KK W Y D I LV
Sbjct: 479 EGYSSLEPNAREKKRWTYVDFINLV 503


>ref|XP_006492991.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Citrus sinensis]
          Length = 477

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/87 (45%), Positives = 58/87 (66%)
 Frame = +2

Query: 11  NIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLC 190
           ++KPD++T GI +DA  IG+DG   LE WRR  +L   V I TD LVL+ +GKG FL+ C
Sbjct: 380 HVKPDIVTIGILYDARRIGFDGTGALEMWRRIGFLSKTVEINTDPLVLAVYGKGHFLRYC 439

Query: 191 EKKYITVHSRQKQKKIWRYSDVIRLVL 271
           E+ Y ++    ++KK W Y ++I LV+
Sbjct: 440 EEVYSSLEPYSREKKRWTYQNLIDLVI 466


>gb|EOY05094.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 504

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/92 (46%), Positives = 60/92 (65%)
 Frame = +2

Query: 14  IKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLCE 193
           ++PD+IT GI  DA +IG+DG   LE WR+   L   V + TD LVL AFGKG FL+ CE
Sbjct: 412 VRPDIITIGILSDAIEIGFDGAEALETWRKMGLLYRTVEMNTDPLVLIAFGKGHFLRDCE 471

Query: 194 KKYITVHSRQKQKKIWRYSDVIRLVLG*KAKR 289
           + Y ++  + +++K W Y  +I LV+  KAKR
Sbjct: 472 EIYTSLEPKARKEKRWTYHHLIDLVIKHKAKR 503


>ref|XP_006855721.1| hypothetical protein AMTR_s00044p00151840 [Amborella trichopoda]
           gi|548859508|gb|ERN17188.1| hypothetical protein
           AMTR_s00044p00151840 [Amborella trichopoda]
          Length = 506

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 37/89 (41%), Positives = 62/89 (69%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           ++ N+ PD++T G+  DA   G+D I  L  WR++ +L   V + TD LVL+AFGKG FL
Sbjct: 411 QLLNVNPDIVTVGVVMDAYVSGFDDIKALRMWRKTGFLRRPVEMNTDPLVLTAFGKGYFL 470

Query: 182 KLCEKKYITVHSRQKQKKIWRYSDVIRLV 268
           + CE+ Y+++ ++ +++K+W Y+D+I LV
Sbjct: 471 RSCEELYLSLGAKGRERKVWTYNDLIDLV 499


>ref|XP_006421046.1| hypothetical protein CICLE_v10004784mg [Citrus clementina]
           gi|557522919|gb|ESR34286.1| hypothetical protein
           CICLE_v10004784mg [Citrus clementina]
          Length = 510

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/87 (44%), Positives = 58/87 (66%)
 Frame = +2

Query: 11  NIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLC 190
           ++KPD++T GI +DA  IG+DG   LE W+R  +L   V I TD LVL+ +GKG FL+ C
Sbjct: 413 HVKPDIVTIGILYDARRIGFDGTGALEMWKRIGFLFKTVEINTDPLVLAVYGKGHFLRYC 472

Query: 191 EKKYITVHSRQKQKKIWRYSDVIRLVL 271
           E+ Y ++    ++KK W Y ++I LV+
Sbjct: 473 EEVYSSLEPYSREKKRWTYQNLIDLVI 499


>ref|XP_002516403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544501|gb|EEF46020.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 41/85 (48%), Positives = 57/85 (67%)
 Frame = +2

Query: 14  IKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLCE 193
           +KPD++T G+ FDA +IG+ G  +LE WRR+  L   V   TD LVL+AFGKG FLK CE
Sbjct: 408 VKPDIVTVGVLFDANNIGFHGNGILETWRRTGILYRCVETETDPLVLAAFGKGQFLKKCE 467

Query: 194 KKYITVHSRQKQKKIWRYSDVIRLV 268
           + Y ++    +QK+ W Y ++I LV
Sbjct: 468 EAYSSLEPVARQKEKWTYCNLIDLV 492


>gb|EXC14264.1| hypothetical protein L484_021763 [Morus notabilis]
          Length = 664

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 35/86 (40%), Positives = 59/86 (68%)
 Frame = +2

Query: 11  NIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLC 190
           +++PD++T GI FDA  +G+DG   LE W+R  +    V + TD +V++AFGKG+FL+ C
Sbjct: 412 SVEPDIVTVGILFDAIGMGFDGTRTLETWKRMDFFYKAVEMNTDPVVITAFGKGNFLQNC 471

Query: 191 EKKYITVHSRQKQKKIWRYSDVIRLV 268
           E+ Y ++ S  ++ K W Y++++ LV
Sbjct: 472 ERAYSSLESEVRETKSWTYNNLVDLV 497


>gb|EMJ24063.1| hypothetical protein PRUPE_ppa004279mg [Prunus persica]
          Length = 518

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/85 (45%), Positives = 53/85 (62%)
 Frame = +2

Query: 14  IKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLCE 193
           ++PD+IT GI FDA  IGYDG   L+ WR + +L   V + TD LVL+ FGKG FL+ CE
Sbjct: 422 VEPDIITVGIVFDANRIGYDGSRTLDTWRENGFLRKAVEMNTDPLVLTTFGKGHFLRNCE 481

Query: 194 KKYITVHSRQKQKKIWRYSDVIRLV 268
             Y ++    ++ K W Y  +I LV
Sbjct: 482 AAYSSLEPEDRENKTWTYHHLIDLV 506


>ref|XP_004298231.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 509

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/82 (46%), Positives = 51/82 (62%)
 Frame = +2

Query: 14  IKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFLKLCE 193
           + PD+IT+GI FDA  IGYDG   L  WR+   L   V + TD LV++ FGKG FL+ CE
Sbjct: 419 VDPDIITFGILFDANRIGYDGSATLNTWRKHGILYKAVEMNTDPLVITTFGKGHFLRNCE 478

Query: 194 KKYITVHSRQKQKKIWRYSDVI 259
             Y ++    ++KK W Y D+I
Sbjct: 479 AAYSSLEPEVREKKTWTYQDLI 500


>ref|NP_193155.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635638|sp|O23278.2|PP310_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14190, chloroplastic; Flags: Precursor
           gi|332657991|gb|AEE83391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 501

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           R+ ++K DL+T GI FD  +  +DG  V   W++  +L+  V ++TD LV +AFGKG FL
Sbjct: 404 RIKHVKLDLVTVGIVFDLSEARFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQFL 463

Query: 182 KLCEK-KYITVHSRQKQKKIWRYSDVIRLVL 271
           + CE+ K  ++ +R  + K W Y  ++ LV+
Sbjct: 464 RSCEEVKNQSLGTRDGESKSWTYQYLMELVV 494


>emb|CAB10198.1| salt-inducible protein homolog [Arabidopsis thaliana]
           gi|7268124|emb|CAB78461.1| salt-inducible protein
           homolog [Arabidopsis thaliana]
          Length = 561

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           R+ ++K DL+T GI FD  +  +DG  V   W++  +L+  V ++TD LV +AFGKG FL
Sbjct: 464 RIKHVKLDLVTVGIVFDLSEARFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQFL 523

Query: 182 KLCEK-KYITVHSRQKQKKIWRYSDVIRLVL 271
           + CE+ K  ++ +R  + K W Y  ++ LV+
Sbjct: 524 RSCEEVKNQSLGTRDGESKSWTYQYLMELVV 554


>ref|XP_002868305.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314141|gb|EFH44564.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 502

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           R  ++K DL+T GI FD  + G+D   V   W++  +L+  V ++TD LV +AFGKG FL
Sbjct: 405 RTKHVKLDLVTVGIIFDLSEAGFDVTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGKFL 464

Query: 182 KLCEK-KYITVHSRQKQKKIWRYSDVIRLVL 271
           K CE+ K  ++  R ++ K W Y  ++ +V+
Sbjct: 465 KSCEEVKNQSLGMRGEESKAWTYQYLMEVVV 495


>ref|XP_006283572.1| hypothetical protein CARUB_v10004636mg [Capsella rubella]
           gi|482552277|gb|EOA16470.1| hypothetical protein
           CARUB_v10004636mg [Capsella rubella]
          Length = 501

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/90 (37%), Positives = 52/90 (57%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           R   +K DL+T GI FD  + G+DG  V   W++  +L+  V ++TD LV +AFGKG FL
Sbjct: 411 RTKRVKLDLVTVGIVFDLSEAGFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQFL 470

Query: 182 KLCEKKYITVHSRQKQKKIWRYSDVIRLVL 271
           + CE+       R +    W Y +++ LV+
Sbjct: 471 RRCEE------MRGEDPTPWTYQNLMELVV 494


>ref|XP_006414780.1| hypothetical protein EUTSA_v10027442mg [Eutrema salsugineum]
           gi|557115950|gb|ESQ56233.1| hypothetical protein
           EUTSA_v10027442mg [Eutrema salsugineum]
          Length = 495

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   RVCNIKPDLITYGIFFDACDIGYDGIHVLEEWRRSRYLEDVVGIRTDQLVLSAFGKGSFL 181
           R  ++K DL+T GI  D    G+DG  V   W++  +L+  V  +TD LV +AFGKG FL
Sbjct: 398 RTKHVKLDLVTVGIVLDLSVDGFDGTGVFMTWKKIGFLDKPVETKTDPLVHAAFGKGRFL 457

Query: 182 KLCEK-KYITVHSRQKQKKIWRYSDVIRLVL 271
           + CE+ K   + +R ++ K W Y  ++ LV+
Sbjct: 458 RSCEEVKNQVLGTRVEESKSWTYQYLMELVV 488