BLASTX nr result

ID: Zingiber24_contig00025481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00025481
         (376 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845387.1| hypothetical protein AMTR_s00019p00053160 [A...    58   1e-06
ref|XP_004138697.1| PREDICTED: enhancer of rudimentary homolog [...    55   7e-06

>ref|XP_006845387.1| hypothetical protein AMTR_s00019p00053160 [Amborella trichopoda]
           gi|548847959|gb|ERN07062.1| hypothetical protein
           AMTR_s00019p00053160 [Amborella trichopoda]
          Length = 127

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -2

Query: 375 FEHSIQAYLPYDRVWIKNRMFHHLKKLASH 286
           F+HSIQAYLPYDR WIK R F HLKKLASH
Sbjct: 98  FDHSIQAYLPYDRQWIKQRTFQHLKKLASH 127


>ref|XP_004138697.1| PREDICTED: enhancer of rudimentary homolog [Cucumis sativus]
           gi|449493309|ref|XP_004159251.1| PREDICTED: enhancer of
           rudimentary homolog [Cucumis sativus]
          Length = 102

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -2

Query: 375 FEHSIQAYLPYDRVWIKNRMFHHLKKLA 292
           FEHSIQAYLPYDR WIK R+F HLKKLA
Sbjct: 74  FEHSIQAYLPYDRQWIKQRIFQHLKKLA 101


Top