BLASTX nr result
ID: Zingiber24_contig00025430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00025430
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi... 81 2e-13
ref|XP_004301498.1| PREDICTED: ATP-dependent DNA helicase Q-like... 79 5e-13
emb|CBI29756.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like... 79 5e-13
gb|EXB87372.1| ATP-dependent DNA helicase Q-like 4A [Morus notab... 79 8e-13
ref|XP_004951944.1| PREDICTED: ATP-dependent DNA helicase Q-like... 75 7e-12
gb|EMJ14919.1| hypothetical protein PRUPE_ppa000416mg [Prunus pe... 75 7e-12
gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays] 75 1e-11
gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays] 75 1e-11
ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [S... 74 2e-11
gb|EOX98092.1| DNA helicase (RECQl4A) isoform 2 [Theobroma cacao] 74 2e-11
gb|EOX98091.1| DNA helicase isoform 1 [Theobroma cacao] 74 2e-11
ref|XP_002303149.2| DNA helicase family protein [Populus trichoc... 74 3e-11
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like... 71 1e-10
ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like... 70 2e-10
ref|XP_006471018.1| PREDICTED: ATP-dependent DNA helicase Q-like... 70 3e-10
ref|XP_006431828.1| hypothetical protein CICLE_v10000077mg [Citr... 70 3e-10
gb|ESW20522.1| hypothetical protein PHAVU_006G216200g [Phaseolus... 69 8e-10
ref|XP_006592671.1| PREDICTED: ATP-dependent DNA helicase Q-like... 68 1e-09
gb|EMS62902.1| ATP-dependent DNA helicase Q-like 4A [Triticum ur... 65 1e-08
>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
[Ricinus communis]
Length = 1233
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/98 (42%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
Frame = +1
Query: 28 QDEERQRSSFMASTTTSRNFQLEIP---SSMTDPVNFNSQAYIRNEPGDTMTWSSPTPSC 198
+D+ERQ+S F AST ++NFQ E P ++ DP+ F++Q Y+RNE G +W++P+ S
Sbjct: 342 RDKERQKSHFSASTA-NQNFQYETPQCAANKIDPMRFDAQVYLRNESGGYESWNTPSISF 400
Query: 199 YA-NQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
+ ++FG +S +R+ + PK +++NYIEGS D KW S
Sbjct: 401 SSVDRFGISSGPIEREPYIPKFVEVNYIEGSNDPKWSS 438
>ref|XP_004301498.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Fragaria
vesca subsp. vesca]
Length = 1156
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSS---MTDPVNFNSQAYIRNEPGDTM 171
LE+ L + DEER++S F STTT F+ E P + TDP+ F+S+ + N+ G
Sbjct: 273 LERYLCTNTLDEERRKSHFSLSTTTPSAFRYETPQAPLFRTDPMRFDSEVHSHNKAGGYA 332
Query: 172 TW-SSPTPSCYANQFGTTS--ADRQVFTPKLLDINYIEGSGDKKWK 300
W SS S ++FG +S +R+ + PK +D+NYIEGS D KW+
Sbjct: 333 EWNSSSVSSSSTDKFGFSSFPVEREPYIPKFVDVNYIEGSNDNKWR 378
>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTS-RNFQLEIPSSM-TDPVNFNSQAYIRNEPGDTMT 174
LE L + DEER+ S+F ASTTT FQ +++ DP+ F++Q ++RNEPG+
Sbjct: 312 LEIHLHSVSVDEERKNSNFSASTTTPWAQFQTPPATAVGIDPMRFDAQVHLRNEPGNYEK 371
Query: 175 WSSPTPSCYA-NQFGTTS--ADRQVFTPKLLDINYIEGSGDKKWKS 303
W++ + S + ++FG T +R+ + PKL+++NYIEGS DKKW S
Sbjct: 372 WNTSSVSFSSIDRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSS 417
>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTS-RNFQLEIPSSM-TDPVNFNSQAYIRNEPGDTMT 174
LE L + DEER+ S+F ASTTT FQ +++ DP+ F++Q ++RNEPG+
Sbjct: 301 LEIHLHSVSVDEERKNSNFSASTTTPWAQFQTPPATAVGIDPMRFDAQVHLRNEPGNYEK 360
Query: 175 WSSPTPSCYA-NQFGTTS--ADRQVFTPKLLDINYIEGSGDKKWKS 303
W++ + S + ++FG T +R+ + PKL+++NYIEGS DKKW S
Sbjct: 361 WNTSSVSFSSIDRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSS 406
>gb|EXB87372.1| ATP-dependent DNA helicase Q-like 4A [Morus notabilis]
Length = 1088
Score = 78.6 bits (192), Expect = 8e-13
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIP---SSMTDPVNFNSQAYIRNEPGDTM 171
LE+ L ++ EERQ+S F STT R+FQ E P SS T+P FN+Q ++RNEPG
Sbjct: 245 LERYLRPNSVVEERQKSHFSTSTTP-RSFQYEAPQAGSSWTEPSRFNAQVHLRNEPG--- 300
Query: 172 TWSSPTPSCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
+ S PS +S DR+ + PK +++YIEGS DKKW S
Sbjct: 301 LYESHNPS----SISFSSIDREPYIPKFSEVSYIEGSNDKKWSS 340
>ref|XP_004951944.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Setaria
italica]
Length = 1205
Score = 75.5 bits (184), Expect = 7e-12
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEI-PSS--MTDPVNFNSQAYIRNEPGDTM 171
LE+ ++ S+QDEERQRS MAST + + P S M D F SQ YIRN PG++
Sbjct: 323 LEEYMARSSQDEERQRSHSMASTAAIQGHLPPMTPGSTFMMDSSRFQSQVYIRNGPGNSD 382
Query: 172 TWSSPTP-SCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
SP P SC N + + +TPK++D NY EGS DK+W S
Sbjct: 383 LCYSPAPYSCSDNLSMPLHSVWREYTPKVIDTNYTEGSADKRWSS 427
>gb|EMJ14919.1| hypothetical protein PRUPE_ppa000416mg [Prunus persica]
Length = 1198
Score = 75.5 bits (184), Expect = 7e-12
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSM---TDPVNFNSQAYIRNEPGDTM 171
LE+ L ++ DEER++S F AST T R FQ E P + TD + F+SQ N PGD
Sbjct: 275 LERHLCNNSLDEERRKSHFSASTATPRPFQYETPQAAAFRTDTMIFDSQVQSHNVPGDYE 334
Query: 172 TWSSPTPSCYA-NQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
+S + S + + FG +S +R+ + PK +++NYIEGS D KW S
Sbjct: 335 RCNSSSVSFSSVDGFGFSSCPVEREPYIPKFVEVNYIEGSNDNKWSS 381
>gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
Length = 613
Score = 74.7 bits (182), Expect = 1e-11
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTM 171
LE ++ S QDEERQ S MASTT+++ + T D F SQ Y+ N P D+
Sbjct: 333 LEDHMTRSAQDEERQISHSMASTTSTQQHLPPMTPGSTFTMDSNRFQSQVYVGNGPRDSD 392
Query: 172 TWSSPTP-SCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
SP P SC N ++ + +TPK++DINY EGSGD+KW S
Sbjct: 393 LCYSPAPYSCSDNLSTPLNSVWKSYTPKVIDINYTEGSGDRKWSS 437
>gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
Length = 750
Score = 74.7 bits (182), Expect = 1e-11
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTM 171
LE ++ S QDEERQ S MASTT+++ + T D F SQ Y+ N P D+
Sbjct: 318 LEDHMTRSAQDEERQISHSMASTTSTQQHLPPMTPGSTFTMDSNRFQSQVYVGNGPRDSD 377
Query: 172 TWSSPTP-SCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
SP P SC N ++ + +TPK++DINY EGSGD+KW S
Sbjct: 378 LCYSPAPYSCSDNLSTPLNSVWKSYTPKVIDINYTEGSGDRKWSS 422
>ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
gi|241933108|gb|EES06253.1| hypothetical protein
SORBIDRAFT_04g003070 [Sorghum bicolor]
Length = 1154
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMAST-TTSRNFQLEIPSS--MTDPVNFNSQAYIRNEPGDT- 168
LE ++ S QDEERQ S MAST T ++ P S +TD F SQ YI N P D+
Sbjct: 316 LEDHMTRSAQDEERQISHSMASTKATQQHLPPMTPGSTFITDSNRFQSQVYIGNGPRDSD 375
Query: 169 MTWSSPTPSCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
+ +SS SC N ++ + +TPK++DINY EGSGD+KW S
Sbjct: 376 LCYSSAPYSCSDNLSTPLNSVWKSYTPKVIDINYTEGSGDRKWSS 420
>gb|EOX98092.1| DNA helicase (RECQl4A) isoform 2 [Theobroma cacao]
Length = 1042
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 31 DEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTMTWSSPTPSCY 201
D ERQ+S F AST T R F P + + DP+ F++Q ++ NEP W+S + S
Sbjct: 327 DMERQKSHFSASTAT-RTFLYGTPQTASFSIDPIRFDAQVHLCNEPNGYENWNSSSVSFS 385
Query: 202 A-NQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
+ N FG +S +R+ + PK++++NYIEGS D+KW S
Sbjct: 386 SVNNFGVSSGPMEREPYVPKIIEVNYIEGSNDQKWSS 422
>gb|EOX98091.1| DNA helicase isoform 1 [Theobroma cacao]
Length = 1250
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 31 DEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTMTWSSPTPSCY 201
D ERQ+S F AST T R F P + + DP+ F++Q ++ NEP W+S + S
Sbjct: 381 DMERQKSHFSASTAT-RTFLYGTPQTASFSIDPIRFDAQVHLCNEPNGYENWNSSSVSFS 439
Query: 202 A-NQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
+ N FG +S +R+ + PK++++NYIEGS D+KW S
Sbjct: 440 SVNNFGVSSGPMEREPYVPKIIEVNYIEGSNDQKWSS 476
>ref|XP_002303149.2| DNA helicase family protein [Populus trichocarpa]
gi|550342106|gb|EEE78128.2| DNA helicase family protein
[Populus trichocarpa]
Length = 1194
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Frame = +1
Query: 28 QDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTMTWSSPTPSC 198
+DEERQ+S F AST RN Q E P S DP+ F++Q ++RN+ W++P+ S
Sbjct: 341 RDEERQKSHFSASTLV-RNLQYETPQSAACKIDPMRFDAQVHLRNDLNGYEKWNAPSVSF 399
Query: 199 YA-NQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
+ + FG +S +R+ + P +++NYIEGS D KW S
Sbjct: 400 SSIDSFGVSSVPLEREPYIPSFVEVNYIEGSNDPKWSS 437
>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus] gi|449511185|ref|XP_004163888.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
partial [Cucumis sativus]
Length = 1269
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSM---TDPVNFNSQAYIRNEPGDTM 171
LE+ +SL +EER+RS A+T T + F E P + TD S + EP
Sbjct: 391 LERHISLDAVNEERRRSHLFATTVTPKTFHFETPPGVEFRTDAKLNTSYVHQDFEPRRIE 450
Query: 172 TWSSPTPSCYANQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
W+S S +FG +S +R+ + PK++D+NYIEGS DKKW S
Sbjct: 451 PWNSMGSSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSS 496
>ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
[Glycine max] gi|571472092|ref|XP_006585495.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like
isoform X2 [Glycine max]
Length = 1160
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTM 171
LEK + N +EERQ+S F AST +F E P +++QAY+ NE +
Sbjct: 286 LEKYIHSGNLNEERQKSHFSASTAPPTSFVYETPQQTVLCNGSKRYDTQAYMGNETYGSS 345
Query: 172 TWSSPTPSCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
S P+ S S R+ F PK++++NYIEGSGDK+W S
Sbjct: 346 FQSLPSFSVDNCNMPLGSVGREAFIPKIIEVNYIEGSGDKRWSS 389
>ref|XP_006471018.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
[Citrus sinensis] gi|568833708|ref|XP_006471019.1|
PREDICTED: ATP-dependent DNA helicase Q-like 4A-like
isoform X2 [Citrus sinensis]
Length = 1212
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Frame = +1
Query: 28 QDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTMTWSSPTPSC 198
Q EERQ+S F ASTT R +Q E P DP+ F++Q ++ NE W+S + S
Sbjct: 338 QAEERQKSHFSASTT--RTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSF 395
Query: 199 YA-NQFGTTS--ADRQVFTPKLLDINYIEGSGDKKWKS 303
+ ++ G +S +R+ F PK++ +NYIEGS D+KW S
Sbjct: 396 SSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSS 433
>ref|XP_006431828.1| hypothetical protein CICLE_v10000077mg [Citrus clementina]
gi|557533950|gb|ESR45068.1| hypothetical protein
CICLE_v10000077mg [Citrus clementina]
Length = 1151
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Frame = +1
Query: 28 QDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTMTWSSPTPSC 198
Q EERQ+S F ASTT R +Q E P DP+ F++Q ++ NE W+S + S
Sbjct: 277 QAEERQKSHFSASTT--RTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSF 334
Query: 199 YA-NQFGTTS--ADRQVFTPKLLDINYIEGSGDKKWKS 303
+ ++ G +S +R+ F PK++ +NYIEGS D+KW S
Sbjct: 335 SSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSS 372
>gb|ESW20522.1| hypothetical protein PHAVU_006G216200g [Phaseolus vulgaris]
Length = 1167
Score = 68.6 bits (166), Expect = 8e-10
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSMTDPVN----FNSQAYIRNEPGDT 168
LEK + N +EERQ+S F AST S ++ P T P N +++QAY+ GD
Sbjct: 295 LEKYIQSGNLNEERQKSHFSASTAPSTSYVYGTPQQ-TAPCNGSKRYDAQAYM----GDG 349
Query: 169 MTWSS--PTPSCYANQFGTTSA--DRQVFTPKLLDINYIEGSGDKKWKS 303
SS PS +++ T S +R+ F PK++++NYIEGSGDK+W S
Sbjct: 350 TFGSSFQSLPSFSIDKYSTLSGPVEREAFIPKIIEVNYIEGSGDKRWSS 398
>ref|XP_006592671.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like isoform X1
[Glycine max]
Length = 1152
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +1
Query: 1 LEKDLSLSNQDEERQRSSFMASTTTSRNFQLEIPSSMT---DPVNFNSQAYIRNEPGDTM 171
LEK + N +EERQ+S F AST +F E P ++++AY+ N +
Sbjct: 278 LEKYIHSGNLNEERQKSHFSASTAPPTSFVYETPQQTVLCNGSKRYDTEAYMGNGTYGSS 337
Query: 172 TWSSPTPSCYANQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
S P S + S R+VF PK++++NYIEGSGDK+W S
Sbjct: 338 FQSLPPFSVDNCSMPSGSVGREVFIPKIIEVNYIEGSGDKRWSS 381
>gb|EMS62902.1| ATP-dependent DNA helicase Q-like 4A [Triticum urartu]
Length = 1097
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 28 QDEERQRSSFMASTTTSRNFQLEI-PSSMTDPVNFNSQAYIRNEPGDTMTWSSPTPSCYA 204
QD+ERQRS MASTT + + + PS+ D SQ Y N P D + +P P Y
Sbjct: 330 QDDERQRSHSMASTTAAEGYHPPMTPSTFVDNNRSQSQFYDMNGPWDGGSCYTPAPCTYM 389
Query: 205 NQFGTTSADRQVFTPKLLDINYIEGSGDKKWKS 303
+ ++ ++ +T + +DI+Y +GSGDKKW S
Sbjct: 390 DSNIPLTSVQRDYTRRNIDISYTDGSGDKKWSS 422