BLASTX nr result
ID: Zingiber24_contig00025348
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00025348 (1410 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japo... 667 0.0 ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group] g... 667 0.0 ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 657 0.0 ref|XP_004974856.1| PREDICTED: RNA pseudouridine synthase 3, mit... 649 0.0 gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays] 645 0.0 ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 605 e-170 emb|CBI18448.3| unnamed protein product [Vitis vinifera] 596 e-168 gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 587 e-165 ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 587 e-165 gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus... 583 e-164 ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 579 e-162 ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit... 578 e-162 ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 578 e-162 ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 577 e-162 ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit... 571 e-160 ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr... 568 e-159 gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe... 566 e-159 ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu... 563 e-158 ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit... 556 e-155 ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian... 554 e-155 >gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japonica Group] Length = 509 Score = 667 bits (1720), Expect = 0.0 Identities = 326/444 (73%), Positives = 378/444 (85%), Gaps = 4/444 (0%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPII-RVS-NNIARLGEPKRAPKPRQLLSLPPFPNSGT-EPLPG 261 +VRWLSR+APPAP +A+P++ RV +N+ARLG+PK P+PRQLLSLPPFP G +PLPG Sbjct: 45 AVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPG 104 Query: 262 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTC 438 RK +A RRVTA+SWVKHY AD+ +E ++ HFNK LVY E S+ + + + Sbjct: 105 RKAAA-----PRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKH 159 Query: 439 SLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 618 L+KIKH+ VME G+RIHLPVSV E +I KRY TIPTATL+PN DEIEY++RLVIHKDSA Sbjct: 160 HLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHKDSA 219 Query: 619 IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 798 I VLNKPPKVP+ GNLPVHNSMD+LAAAALS G+++GPKLVHRLDRESSGLLL GRTKES Sbjct: 220 ILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKES 279 Query: 799 FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 978 FTRLHWLFT+VNLAK++S++WN ACEA MQRYWALVIGTPKE+EG+ISAPL+KV+L+DGK Sbjct: 280 FTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGK 339 Query: 979 GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 1158 ERVILAHPSGIDG+QEA T YRVMGPTI+GCSWIEL PLT RKHQLRVHCAEALGTPIV Sbjct: 340 AERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIV 399 Query: 1159 GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 1338 GDYKYGWFV QRWKQ P+ DFEP +GEPYKLRRPEGL +QKGSVLSKVPLLHLHCREMVI Sbjct: 400 GDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVI 459 Query: 1339 PNISKFLGSSGEWLDETNEWTASK 1410 PNI+KFL S+GEW + W+ K Sbjct: 460 PNIAKFLSSNGEWHENGAPWSKEK 483 >ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group] gi|122234516|sp|Q0J4D4.1|PUS3_ORYSJ RecName: Full=RNA pseudouridine synthase 3, mitochondrial; AltName: Full=RNA pseudouridylate synthase 3; AltName: Full=RNA-uridine isomerase 3; Flags: Precursor gi|113624234|dbj|BAF24179.1| Os08g0520100 [Oryza sativa Japonica Group] gi|125562210|gb|EAZ07658.1| hypothetical protein OsI_29911 [Oryza sativa Indica Group] Length = 475 Score = 667 bits (1720), Expect = 0.0 Identities = 326/444 (73%), Positives = 378/444 (85%), Gaps = 4/444 (0%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPII-RVS-NNIARLGEPKRAPKPRQLLSLPPFPNSGT-EPLPG 261 +VRWLSR+APPAP +A+P++ RV +N+ARLG+PK P+PRQLLSLPPFP G +PLPG Sbjct: 11 AVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPG 70 Query: 262 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTC 438 RK +A RRVTA+SWVKHY AD+ +E ++ HFNK LVY E S+ + + + Sbjct: 71 RKAAA-----PRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKH 125 Query: 439 SLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 618 L+KIKH+ VME G+RIHLPVSV E +I KRY TIPTATL+PN DEIEY++RLVIHKDSA Sbjct: 126 HLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHKDSA 185 Query: 619 IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 798 I VLNKPPKVP+ GNLPVHNSMD+LAAAALS G+++GPKLVHRLDRESSGLLL GRTKES Sbjct: 186 ILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKES 245 Query: 799 FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 978 FTRLHWLFT+VNLAK++S++WN ACEA MQRYWALVIGTPKE+EG+ISAPL+KV+L+DGK Sbjct: 246 FTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGK 305 Query: 979 GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 1158 ERVILAHPSGIDG+QEA T YRVMGPTI+GCSWIEL PLT RKHQLRVHCAEALGTPIV Sbjct: 306 AERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIV 365 Query: 1159 GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 1338 GDYKYGWFV QRWKQ P+ DFEP +GEPYKLRRPEGL +QKGSVLSKVPLLHLHCREMVI Sbjct: 366 GDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVI 425 Query: 1339 PNISKFLGSSGEWLDETNEWTASK 1410 PNI+KFL S+GEW + W+ K Sbjct: 426 PNIAKFLSSNGEWHENGAPWSKEK 449 >ref|XP_003572398.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Brachypodium distachyon] Length = 479 Score = 657 bits (1694), Expect = 0.0 Identities = 320/441 (72%), Positives = 371/441 (84%), Gaps = 3/441 (0%) Frame = +1 Query: 97 RWLSRVAPPAPVKAEPIIRVSN--NIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 270 R LSR+APPAP A P++RV + N+ARLG PK P+PRQLLSLPPFP +G +PLPGRK Sbjct: 16 RRLSRLAPPAPAAAAPVVRVESGSNVARLGAPKPGPRPRQLLSLPPFP-AGADPLPGRKT 74 Query: 271 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTCSLE 447 +A RRV+A+SWVKH FAD+ +E ++ HFNK V+ E S+Q+ A + L+ Sbjct: 75 AAAEAS--RRVSAVSWVKHCFADVPQEVVQAHFNKRQVFAECSDQEVSAVSIRSQEHHLK 132 Query: 448 KIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFV 627 KIKH VME G+RIHLPVSV E +I KRY TIP ATL+PN DEIEY+KRLVI+KDSAI V Sbjct: 133 KIKHSEVMEPGMRIHLPVSVAEAEIKKRYETIPAATLHPNKDEIEYLKRLVIYKDSAILV 192 Query: 628 LNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTR 807 LNKPPKVP+ G+LPVHNSMD+LAAAALS G++ GPKLVHRLDR++SGLLLMGRTKESFTR Sbjct: 193 LNKPPKVPMKGHLPVHNSMDVLAAAALSYGNEDGPKLVHRLDRDTSGLLLMGRTKESFTR 252 Query: 808 LHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGER 987 LHWLFT+V LA+++S IWN+ACE+ +QRYWALVIGTPKE EGVISAPLTKV+L+DGK ER Sbjct: 253 LHWLFTSVKLARTASPIWNSACESYLQRYWALVIGTPKESEGVISAPLTKVLLDDGKAER 312 Query: 988 VILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDY 1167 VILAHPSGIDG+QEA TEYRVMGPTINGCSWIELCPLT RKHQLRVHCAEALGTPIVGDY Sbjct: 313 VILAHPSGIDGAQEAVTEYRVMGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDY 372 Query: 1168 KYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNI 1347 KYGWFV QRWKQ P+ DFEP +GE YKLRRPEGL VQKGSVLSKVPLLHLHCREMV+PNI Sbjct: 373 KYGWFVHQRWKQNPQPDFEPFTGEQYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNI 432 Query: 1348 SKFLGSSGEWLDETNEWTASK 1410 +KFL ++G+W D+ W+ K Sbjct: 433 AKFLSNTGDWHDDGTPWSKEK 453 >ref|XP_004974856.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like, partial [Setaria italica] Length = 464 Score = 649 bits (1673), Expect = 0.0 Identities = 318/443 (71%), Positives = 373/443 (84%), Gaps = 3/443 (0%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPII-RV-SNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGR 264 ++R LSR+APP P A+P++ RV S+N+ARLG PK P+PRQLLSLPPFP +G +PLPGR Sbjct: 3 ALRRLSRLAPPTPAPADPVVVRVDSSNVARLGAPKPGPRPRQLLSLPPFP-AGADPLPGR 61 Query: 265 KKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKE-NNFTCS 441 K RRVTA+SWVKHYFAD+ +EA++ HFN+ +V+ E S + A+ Sbjct: 62 KVVP------RRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSECSEHEFSAESIRTQKHH 115 Query: 442 LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAI 621 L+KIKH+ VME G+RIHLPVSV E +I KRY TIPTATL+PN DEIEY++RLVIH+DS+I Sbjct: 116 LKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHRDSSI 175 Query: 622 FVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESF 801 VLNKPPKVP+ G+LPVHNSMD+LAAAALS G+ +GPKLVHRLDRESSGL+LMGRTKESF Sbjct: 176 LVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGNKEGPKLVHRLDRESSGLILMGRTKESF 235 Query: 802 TRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKG 981 T+LHWLFT+VNLA+++S+ WN ACEA +Q+YWALVIGTPKE+EGVISAP++KV+L+DGK Sbjct: 236 TQLHWLFTSVNLARTTSQTWNKACEAYVQKYWALVIGTPKEREGVISAPISKVLLDDGKA 295 Query: 982 ERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVG 1161 ERVILAHPSGIDG+QEA TEYRVMGPTINGCSWIEL PLT RKHQLRVHCAEALGTPIVG Sbjct: 296 ERVILAHPSGIDGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVG 355 Query: 1162 DYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIP 1341 DYKYGWFV QRWKQ P+ DFEP +GEPYK+RRPEGL VQKGSVLSKVPLLHLHCREMV+P Sbjct: 356 DYKYGWFVHQRWKQNPQPDFEPFTGEPYKIRRPEGLEVQKGSVLSKVPLLHLHCREMVLP 415 Query: 1342 NISKFLGSSGEWLDETNEWTASK 1410 NI+KFL S GEW D W K Sbjct: 416 NIAKFLSSIGEWHDGGAAWAKEK 438 >gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays] Length = 478 Score = 645 bits (1663), Expect = 0.0 Identities = 317/445 (71%), Positives = 373/445 (83%), Gaps = 5/445 (1%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPII-RV-SNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGR 264 ++R LSR+APPAP A+P++ RV +NN+ARLG PK P+PRQLLSLPPFP +G +PLPGR Sbjct: 17 ALRRLSRLAPPAPAPADPVVVRVDANNVARLGAPKPRPRPRQLLSLPPFP-AGQDPLPGR 75 Query: 265 KKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS- 441 K + RRVTA+SWVKHYFAD+ +EA++ HFN+ +V+ E D++ ++ Sbjct: 76 KVAP------RRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSEC--YDHKVSADSIRTQK 127 Query: 442 --LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDS 615 L+KIKH+ ME G+RIHLPVSV E+ I KRY TIPTATL+PN DEIEY++RLVI++DS Sbjct: 128 HHLKKIKHNDAMEPGMRIHLPVSVAESDIKKRYETIPTATLHPNKDEIEYLRRLVIYRDS 187 Query: 616 AIFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKE 795 AI VLNKPPKVP+ G+LPVHNSMD+LAAAALS GS++GPKLVHRLDRESSGL+LMGRTKE Sbjct: 188 AILVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGSEEGPKLVHRLDRESSGLILMGRTKE 247 Query: 796 SFTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDG 975 SFTRLHWL T+VNLA++SS+ WN ACEA Q+YWALVIGTPKE+EGVISAP++KV+L+DG Sbjct: 248 SFTRLHWLLTSVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPISKVLLDDG 307 Query: 976 KGERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPI 1155 K ERVILAHPSGIDG+QEA TEYRVMGPTINGCSWIEL PLT RKHQLRVHCAEALGTPI Sbjct: 308 KAERVILAHPSGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCAEALGTPI 367 Query: 1156 VGDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMV 1335 VGDYKYGWFV Q WKQ P+ DFEP +GEPYKLRRPEGL +QKGSVLSKVPLLHLHCREMV Sbjct: 368 VGDYKYGWFVHQTWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMV 427 Query: 1336 IPNISKFLGSSGEWLDETNEWTASK 1410 IPNI+KFL S+G W + W K Sbjct: 428 IPNIAKFLSSTGGWHENGTPWAKEK 452 >ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis vinifera] Length = 479 Score = 605 bits (1559), Expect = e-170 Identities = 295/427 (69%), Positives = 349/427 (81%), Gaps = 1/427 (0%) Frame = +1 Query: 82 IFESVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPG 261 +F VR SR+APP P A P+IRVSNN+A+LG PK PKPRQLLSLPPFP PLPG Sbjct: 12 LFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFP---AHPLPG 68 Query: 262 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS 441 K G VTAISW+K+YF +I ++ HFNKGLV++E SN D+ + E Sbjct: 69 -KSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127 Query: 442 -LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 618 L KIK + VME+G RI++PVSV E +I+KR+ TIP+ TL+PNADEIEY++RLV +KD A Sbjct: 128 PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPA 187 Query: 619 IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 798 I VLNKPPKVP+ GNLPVHNSMD LAAAAL+ ++GPKLVHRLDRESSGLLLMGRTKES Sbjct: 188 ILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKES 247 Query: 799 FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 978 LHWLF+++N AKS S+ W++ACEAT QRYWALVIG+PK+KEGVI APL+KV+L+DGK Sbjct: 248 VAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGK 307 Query: 979 GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 1158 ERVILA+ SG++ SQEA TEYRV+GP INGCSWIELCP TSRKHQLRVHCAEALGTPIV Sbjct: 308 TERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIV 367 Query: 1159 GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 1338 GDYKYGWFV +RWKQMPR D EP++G+PYK+RRPEGL VQKGSVLSKVPLLHLHCRE+++ Sbjct: 368 GDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELIL 427 Query: 1339 PNISKFL 1359 PNI+KFL Sbjct: 428 PNIAKFL 434 >emb|CBI18448.3| unnamed protein product [Vitis vinifera] Length = 481 Score = 596 bits (1537), Expect = e-168 Identities = 294/429 (68%), Positives = 348/429 (81%), Gaps = 3/429 (0%) Frame = +1 Query: 82 IFESVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPG 261 +F VR SR+APP P A P+IRVSNN+A+LG PK PKPRQLLSLPPFP PLPG Sbjct: 12 LFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFP---AHPLPG 68 Query: 262 RKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS 441 K G VTAISW+K+YF +I ++ HFNKGLV++E SN D+ + E Sbjct: 69 -KSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127 Query: 442 -LEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHK--D 612 L KIK + VME+G RI++PVSV E +I+KR+ TIP+ TL+PNADEIEY++RL + K D Sbjct: 128 PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQD 187 Query: 613 SAIFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTK 792 AI VLNKPPKVP+ GNLPVHNSMD LAAAAL+ ++GPKLVHRLDRESSGLLLMGRTK Sbjct: 188 PAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTK 247 Query: 793 ESFTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLND 972 ES LHWLF+++N AKS S+ W++ACEAT QRYWALVIG+PK+KEGVI APL+KV+L+D Sbjct: 248 ESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDD 307 Query: 973 GKGERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTP 1152 GK ERVILA+ SG++ SQEA TEYRV+GP INGCSWIELCP TSRKHQLRVHCAEALGTP Sbjct: 308 GKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTP 367 Query: 1153 IVGDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREM 1332 IVGDYKYGWFV +RWKQMPR D EP++G+PYK+RRPEGL VQKGSVLSKVPLLHLHCRE+ Sbjct: 368 IVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 427 Query: 1333 VIPNISKFL 1359 ++PNI+KFL Sbjct: 428 ILPNIAKFL 436 >gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao] Length = 471 Score = 587 bits (1514), Expect = e-165 Identities = 290/423 (68%), Positives = 341/423 (80%), Gaps = 1/423 (0%) Frame = +1 Query: 94 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 273 VR SRVAPP P A+P++RVSN++A LG PK+ PKPRQLLSLPPFP PLPG+ Sbjct: 14 VRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGY---PLPGKNP- 69 Query: 274 AGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQ-DNQAKENNFTCSLEK 450 G RVTAISW+K+YF +I + AI+ HFNKGLV +ESSN D + + L K Sbjct: 70 ----GGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLRK 125 Query: 451 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 630 IKH+ VME G R+ +PVS+ ET+I+KR+ IP+ TL PN DEI+Y++RLV +KD AI VL Sbjct: 126 IKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVL 185 Query: 631 NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 810 NKPPK+PV G+LPVHNSMD LAAAALS D+GPKLVHRLDRESSGLLLMGRTKES L Sbjct: 186 NKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHL 245 Query: 811 HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 990 HWLF ++N KSS + WN+AC+ QR+WALVIGTPKEKEG+I APL+K++L+DGK ERV Sbjct: 246 HWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERV 305 Query: 991 ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 1170 ILA G++ SQEA TEYRV+GP INGCSWIEL PLTSRKHQLRVHCAEALGTPIVGDYK Sbjct: 306 ILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYK 365 Query: 1171 YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 1350 YGWFV +RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+ Sbjct: 366 YGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 425 Query: 1351 KFL 1359 KFL Sbjct: 426 KFL 428 >ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis] gi|223533842|gb|EEF35573.1| ribosomal pseudouridine synthase, putative [Ricinus communis] Length = 468 Score = 587 bits (1512), Expect = e-165 Identities = 294/426 (69%), Positives = 336/426 (78%) Frame = +1 Query: 97 RWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSA 276 R SR+APP P A P+IRVSNN+A LG PK PKPRQLLSLPPFP PLPGR A Sbjct: 15 RSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPGL---PLPGRNSMA 71 Query: 277 GSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEKIK 456 VTAISWVK+YF +I + AI+ HFNKGL +IE N E SL KIK Sbjct: 72 S------HVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSI-EYGGQMSLRKIK 124 Query: 457 HDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLNK 636 H+ +ME+G R+H+ VSV ET+I+KR+ TIP+ TL PNADEI+Y++RLV +KDSAI VLNK Sbjct: 125 HNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNK 184 Query: 637 PPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLHW 816 PP++PV GNLP+HNSMD LAAAALS D+GPKLV RLDRESSGLLLMGRTKES L W Sbjct: 185 PPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQW 244 Query: 817 LFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVIL 996 LF++VN + S + WN+AC+AT QRYWALVIG+PKEKEG+I APL+KV+LNDGK ERV+L Sbjct: 245 LFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVL 304 Query: 997 AHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKYG 1176 A SG++ SQEA TEYRV+GP INGCSWIEL PLTSRKHQLRVHCAEALGTPIVGDYKYG Sbjct: 305 AQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 364 Query: 1177 WFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISKF 1356 W V QRWKQMPR D EP SG+PYKLRRP GL VQKGSVLSKVPLLHLHCRE V+PNI+KF Sbjct: 365 WCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKF 424 Query: 1357 LGSSGE 1374 L E Sbjct: 425 LAVLNE 430 >gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris] Length = 480 Score = 583 bits (1504), Expect = e-164 Identities = 283/423 (66%), Positives = 337/423 (79%), Gaps = 1/423 (0%) Frame = +1 Query: 94 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 273 VR SR+ PP PV EP+IRVSNN+ARL PK PKPRQLLSLPPFP PLP K S Sbjct: 19 VRHYSRIQPPRPVSVEPVIRVSNNVARLDAPKEGPKPRQLLSLPPFPG---HPLPA-KSS 74 Query: 274 AGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESS-NQDNQAKENNFTCSLEK 450 G++ VTA++W+K+YF I HF +GLV +E D+ ++ N + K Sbjct: 75 TSDPGQRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEDEVTADSYTQKENLMKPMRK 134 Query: 451 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 630 I+ + VM+ G R+H+PVS+ ET+++KRY IP TL PNADEI+Y++RLVI+KDSAI VL Sbjct: 135 IRPNEVMKHGARVHVPVSIAETRVSKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAIIVL 194 Query: 631 NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 810 NKPPK+PV GNLPVHNSMD LAAAALS D+GPKLVHRLDRE+SG+LL+GRTK+S + L Sbjct: 195 NKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETSGILLLGRTKDSASHL 254 Query: 811 HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 990 WLFTN+N AKSS + WN+ACEAT QRYWALVIGTPKEKEG+I APL+KV+LNDGK ER+ Sbjct: 255 QWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERI 314 Query: 991 ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 1170 ILA+ S ++ QEA TE+RV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYK Sbjct: 315 ILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYK 374 Query: 1171 YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 1350 YGWFV RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+ Sbjct: 375 YGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 434 Query: 1351 KFL 1359 KFL Sbjct: 435 KFL 437 >ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform X1 [Cicer arietinum] Length = 479 Score = 579 bits (1492), Expect = e-162 Identities = 285/423 (67%), Positives = 334/423 (78%), Gaps = 1/423 (0%) Frame = +1 Query: 94 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 273 VR SR+ PP PV E +IRVSNNIARL PK PKPRQLLSLPPFP PLPG K S Sbjct: 18 VRHYSRIRPPKPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFP---CHPLPG-KNS 73 Query: 274 AGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCS-LEK 450 + GK+ VTA++W+K+YF I HF +GLV +E D+ K+ + K Sbjct: 74 TSAPGKRDHVTAVNWIKYYFKGTSGSVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRK 133 Query: 451 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 630 I+ + VM+ G R+H+ VS+ ETKI+KR+ IP+ TL PNADEI+Y++RLVI+KDSAI +L Sbjct: 134 IRPNEVMKPGARVHVSVSMAETKISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIML 193 Query: 631 NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 810 NKPPK+PV GNLPVHNSMD LAAAALS D GPKLVHRLDRESSG+LL+GRTK+S + L Sbjct: 194 NKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHL 253 Query: 811 HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 990 WLF+N+N KSS + WN+ACE+T QRYWALVIGTPKEKEG+I APL+KV+LNDGK ERV Sbjct: 254 QWLFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERV 313 Query: 991 ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 1170 ILAH S I+ QEA TEYRV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYK Sbjct: 314 ILAHESSIEPHQEAVTEYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYK 373 Query: 1171 YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 1350 YGWFV RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+ +PNI+ Sbjct: 374 YGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIA 433 Query: 1351 KFL 1359 KFL Sbjct: 434 KFL 436 >ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform X1 [Glycine max] Length = 476 Score = 578 bits (1489), Expect = e-162 Identities = 284/422 (67%), Positives = 336/422 (79%), Gaps = 1/422 (0%) Frame = +1 Query: 97 RWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSA 276 R SR+ PP PV EP+I VSNNIARL PK PKPRQLLSLPPFP PLP + + Sbjct: 19 RHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPG---HPLPDKSSIS 75 Query: 277 GSCGKQRR-VTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEKI 453 GS +QR VTA++W+K+YF I HF +GLV +E+ + Q +E + KI Sbjct: 76 GS--RQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQ--MKPMRKI 131 Query: 454 KHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLN 633 + + VM+ G R+H+PVS+ ET+I+KRY IP+ TL PNADEI+Y++RLVI+KDSAI VLN Sbjct: 132 RPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLN 191 Query: 634 KPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLH 813 KPPK+PV G+LPVHNSMD LAAAALS D+GPKLVHRLDRESSG+LL+GRTK+S + L Sbjct: 192 KPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQ 251 Query: 814 WLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVI 993 WLF+N+N AKSS + WN ACEAT QRYWALVIGTPKEKEG+I APL+KV+LNDGK ER+I Sbjct: 252 WLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERII 311 Query: 994 LAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKY 1173 LAH S ++ QEA TEYRV+GP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKY Sbjct: 312 LAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKY 371 Query: 1174 GWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISK 1353 GWFV RWKQMPR D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI K Sbjct: 372 GWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVK 431 Query: 1354 FL 1359 F+ Sbjct: 432 FM 433 >ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis sativus] Length = 471 Score = 578 bits (1489), Expect = e-162 Identities = 285/423 (67%), Positives = 332/423 (78%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 270 + R SR++PP P A+PIIRVSNNIA+LG PK PK RQLLSLPPFP PLPG K Sbjct: 12 ATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY---PLPG-KN 67 Query: 271 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEK 450 G G+ VTAI WVK+YF +I++ I+ HF KGLV +E ++ N + K Sbjct: 68 QVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLK-PMRK 126 Query: 451 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 630 I+ +ME+G RIHLPVSV E K+ +R+ TIP+ TL PNADEI+Y++RLV +KDSAI VL Sbjct: 127 IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVL 186 Query: 631 NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 810 NKPPK+PV G LPVHNSMD LA AALS D GPKLVHRLDRESSG+LLMGRTKES L Sbjct: 187 NKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHL 246 Query: 811 HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 990 WLF+N+ AK + + W AC AT Q+YWALVIG P+E+EGVISAPL+KV+L+DGK ERV Sbjct: 247 QWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERV 306 Query: 991 ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 1170 ILA+ + I+ SQEA TEYRV+GPTINGCSWIELCP TSRKHQLR+HCAEALGTPIVGDYK Sbjct: 307 ILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYK 366 Query: 1171 YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 1350 YGWFV +RWKQMPR D EP SG PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+ Sbjct: 367 YGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 426 Query: 1351 KFL 1359 KFL Sbjct: 427 KFL 429 >ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis sativus] Length = 471 Score = 577 bits (1488), Expect = e-162 Identities = 284/423 (67%), Positives = 332/423 (78%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKK 270 + R SR++PP P A+PIIRVSNNIA+LG PK PK RQLLSLPPFP PLPG K Sbjct: 12 ATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY---PLPG-KN 67 Query: 271 SAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEK 450 G G+ VTAI WVK+YF +I++ I+ HF KGLV +E ++ N + K Sbjct: 68 QVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDEKGNLK-PMRK 126 Query: 451 IKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVL 630 I+ +ME+G RIHLPVSV E K+ +R+ TIP+ TL PNADEI+Y++RLV +KDSAI VL Sbjct: 127 IRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVL 186 Query: 631 NKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRL 810 NKPPK+PV G LPVHNSMD LA AALS D GPKLVHRLDRESSG+LLMGRTKES L Sbjct: 187 NKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHL 246 Query: 811 HWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERV 990 WLF+N+ AK + + W AC AT Q+YWALVIG P+E+EGVISAPL+KV+L+DGK ERV Sbjct: 247 QWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERV 306 Query: 991 ILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYK 1170 +LA+ + I+ SQEA TEYRV+GPTINGCSWIELCP TSRKHQLR+HCAEALGTPIVGDYK Sbjct: 307 VLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYK 366 Query: 1171 YGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNIS 1350 YGWFV +RWKQMPR D EP SG PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+ Sbjct: 367 YGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIA 426 Query: 1351 KFL 1359 KFL Sbjct: 427 KFL 429 >ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus sinensis] Length = 471 Score = 571 bits (1471), Expect = e-160 Identities = 286/441 (64%), Positives = 345/441 (78%), Gaps = 1/441 (0%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPIIRVSNN-IARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRK 267 S+R SR++PP P +IRVS +A LG PK PKPRQLLSLPPFP LPG+ Sbjct: 14 SIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHN---LPGKH 66 Query: 268 KSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLE 447 G+Q VTA+SWVK+YF ++++ I+ HFNKGLV +E +N + E + Sbjct: 67 -----WGRQGHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFVEQGQMKPIR 121 Query: 448 KIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFV 627 KIK + VME G RI LPVS+ E +I+KRY TIP+ TLNPNADEI+Y++RLV ++DSAI V Sbjct: 122 KIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILV 181 Query: 628 LNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTR 807 LNKPPKVP+ GNLPVHNSMD LAAAALS +++GPKLVHRLDRESSGLLLMGRTKES + Sbjct: 182 LNKPPKVPLKGNLPVHNSMDALAAAALSYDNNEGPKLVHRLDRESSGLLLMGRTKESVSL 241 Query: 808 LHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGER 987 L WLF++VN +KS S+ WN+ACEA QRYWALVIG+P+EK+G+I APL+KV+L+DGK ER Sbjct: 242 LTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTER 301 Query: 988 VILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDY 1167 +ILA SG++ SQEA TEYRV+GP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDY Sbjct: 302 IILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDY 361 Query: 1168 KYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNI 1347 KYGWFV +RWKQMPR D EP+SG+PYKLRRP+GL VQKGSVLSKVPLLHLHCRE+V+PNI Sbjct: 362 KYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNI 421 Query: 1348 SKFLGSSGEWLDETNEWTASK 1410 +KF+ + D +SK Sbjct: 422 AKFINVLNQKSDNLFPTLSSK 442 >ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina] gi|557538602|gb|ESR49646.1| hypothetical protein CICLE_v10031422mg [Citrus clementina] Length = 471 Score = 568 bits (1463), Expect = e-159 Identities = 283/423 (66%), Positives = 338/423 (79%), Gaps = 1/423 (0%) Frame = +1 Query: 91 SVRWLSRVAPPAPVKAEPIIRVSNN-IARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRK 267 S+R SR++PP P +IRVS +A LG PK PKPRQLLSLPPFP LPG+ Sbjct: 14 SIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHN---LPGKH 66 Query: 268 KSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLE 447 G+Q VTA+SWVK+YF ++++ I+ HFNKGLV +E +N + E + Sbjct: 67 -----WGRQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFVEQGQMKPIR 121 Query: 448 KIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFV 627 KIK + VME G RI LPVS+ E +I+KRY TIP+ TLNPNADEI+Y++RLV ++DSAI V Sbjct: 122 KIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILV 181 Query: 628 LNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTR 807 LNKPPKVP+ G+LPVHNSMD LAAAALS ++GPKLVHRLDRESSGLLLMGRTKES + Sbjct: 182 LNKPPKVPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSL 241 Query: 808 LHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGER 987 L WLF++VN +KS S+ WN+ACEA QRYWALVIG+PKEK+G+I APL+KV+L+DGK ER Sbjct: 242 LTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTER 301 Query: 988 VILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDY 1167 +ILA SG++ SQEA TEYRV+GP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGDY Sbjct: 302 IILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDY 361 Query: 1168 KYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNI 1347 KYGWFV +RWKQMPR D EP+SG+PYKLRRP+GL VQKGSVLSKVPLLHLHCRE+V+PNI Sbjct: 362 KYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNI 421 Query: 1348 SKF 1356 +KF Sbjct: 422 AKF 424 >gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica] Length = 471 Score = 566 bits (1459), Expect = e-159 Identities = 285/438 (65%), Positives = 341/438 (77%) Frame = +1 Query: 97 RWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSA 276 R SRV PP A P+IRVSN++ARLG PK PKPRQLLSLPPFP PLPG++ Sbjct: 16 REYSRVCPPPAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPFPG---HPLPGKRSHE 72 Query: 277 GSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEKIK 456 G G RVTA+SWVK+YF I + I+ HF +GLV +E + + + KI+ Sbjct: 73 G--GVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMECPGMIEKEGQMK---PMRKIR 127 Query: 457 HDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLNK 636 VME G R+++PVSV E+++++R+ IP+ TL PNADEIEYM+R V +KDSAI VLNK Sbjct: 128 PSEVMEVGARVYVPVSVVESRVSRRFDCIPSGTLYPNADEIEYMQRRVKYKDSAIIVLNK 187 Query: 637 PPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLHW 816 PPK+PV GNLPVHNSMD LAAAALS G+++GPKLVHRLDRESSGL LMGRTKES + L W Sbjct: 188 PPKLPVKGNLPVHNSMDALAAAALSYGNNKGPKLVHRLDRESSGLHLMGRTKESVSLLQW 247 Query: 817 LFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVIL 996 L+T+ N KSS + W++ACEA QRYWALVIG+PKEKEG+I APL+KV+L++GK ERVIL Sbjct: 248 LYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVIL 307 Query: 997 AHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKYG 1176 AH SG++ SQ+A T+YRV+GPTINGCSWIEL PLTSRKHQLRVHCAEALGTPIVGDYKYG Sbjct: 308 AHQSGLEASQKAITQYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 367 Query: 1177 WFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISKF 1356 WFV +RWKQMP D EP+SG PYKLRRP GL VQKGSVLSKVPLLHLHCRE+V+PNI+KF Sbjct: 368 WFVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKF 427 Query: 1357 LGSSGEWLDETNEWTASK 1410 L + LD + +SK Sbjct: 428 LLILDQKLDSLHPAVSSK 445 >ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa] gi|550341843|gb|ERP62872.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa] Length = 462 Score = 563 bits (1452), Expect = e-158 Identities = 284/428 (66%), Positives = 336/428 (78%), Gaps = 1/428 (0%) Frame = +1 Query: 79 VIFESVRWLSRVAPPAPVKAEPIIRVS-NNIARLGEPKRAPKPRQLLSLPPFPNSGTEPL 255 ++ VR SRVAP ++RV+ N+A+LG PK PKPRQLLSLPPFP PL Sbjct: 7 LVSSGVRLYSRVAPQ-------VVRVTAKNVAKLGSPKEGPKPRQLLSLPPFPGF---PL 56 Query: 256 PGRKKSAGSCGKQRRVTAISWVKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFT 435 PG KKS +C VTAISWVK+YF +I++ I+ HFNK LV IE + + + Sbjct: 57 PG-KKSLNAC----HVTAISWVKYYFDEIQDSVIQSHFNKSLVQIECPSSSDSVEMEGLG 111 Query: 436 CSLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDS 615 + KIK VME G RIH+PVSV ET I+KR+ TIP+ TL PNADEIEY++RLV +KDS Sbjct: 112 KPMRKIKPSDVMEVGARIHIPVSVAETAISKRFDTIPSGTLYPNADEIEYLQRLVKYKDS 171 Query: 616 AIFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKE 795 A+ VLNKPPKVPV GN+P+HNSMD LAAAALS G D+GPKLVHRLDRESSGLLLMGRTKE Sbjct: 172 ALLVLNKPPKVPVKGNMPIHNSMDALAAAALSYGYDEGPKLVHRLDRESSGLLLMGRTKE 231 Query: 796 SFTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDG 975 S L LF+ +N A+S WN+ACEAT QRYWALVIG+PK+KEG+ISA L+KV+L+DG Sbjct: 232 SIAHLQLLFSYINKAQSKCHAWNDACEATYQRYWALVIGSPKDKEGLISARLSKVLLDDG 291 Query: 976 KGERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPI 1155 K ERV+LA S ++ S++A TEYRV+GPTINGCSWIEL PLTSRKHQLRVHCAEALGTPI Sbjct: 292 KTERVVLAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPI 351 Query: 1156 VGDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMV 1335 VGDYKYGWFV +RWKQMPR D EPSSG+PYKLR PEG+ +QKGSVL+KVPLLHLHCRE+V Sbjct: 352 VGDYKYGWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDIQKGSVLAKVPLLHLHCRELV 411 Query: 1336 IPNISKFL 1359 +PNI+KFL Sbjct: 412 LPNIAKFL 419 >ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform X2 [Solanum tuberosum] gi|565374399|ref|XP_006353751.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform X3 [Solanum tuberosum] Length = 475 Score = 556 bits (1432), Expect = e-155 Identities = 275/407 (67%), Positives = 325/407 (79%) Frame = +1 Query: 139 EPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKSAGSCGKQRRVTAISW 318 EP+IRVSNNI LG K KP QLLSLPPFP PLPG+K + G VTAISW Sbjct: 32 EPVIRVSNNITHLGRQKEGAKPSQLLSLPPFPG---HPLPGKKVATGPDQPSCHVTAISW 88 Query: 319 VKHYFADIEEEAIRWHFNKGLVYIESSNQDNQAKENNFTCSLEKIKHDHVMESGVRIHLP 498 +K+YF +I I+ HFNKGLV +E N+ +KE T L KIKH VME G RIH+P Sbjct: 89 IKYYFDEIPGSVIQTHFNKGLVQLEF-NELFTSKEGQ-TRLLRKIKHSEVMEVGARIHVP 146 Query: 499 VSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSAIFVLNKPPKVPVNGNLPVHN 678 +SV ET+I+KRY IP+ TL PNADEI Y++RLV +KD AI VLNKPPK+P+ GNLPVHN Sbjct: 147 ISVAETRISKRYDVIPSGTLYPNADEIAYLQRLVFYKDPAILVLNKPPKLPLKGNLPVHN 206 Query: 679 SMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKESFTRLHWLFTNVNLAKSSSEI 858 SMD LAAAALS D+GP+LVHRLDRESSGL LMGRT+ES + LH LF+N +KS S+ Sbjct: 207 SMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNTKKSKSLSKA 266 Query: 859 WNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGKGERVILAHPSGIDGSQEATT 1038 WN+AC +T QRYWALVIG+PKEKEGVISAPLTKV+L+DG+ ERV+LA SG++ S EA T Sbjct: 267 WNDACGSTYQRYWALVIGSPKEKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVT 326 Query: 1039 EYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVQQRWKQMPRQD 1218 EYR++GP INGCSWIEL P TSRKHQ+RVHCAEALGTPIVGDYKYGWFV ++WKQMPR D Sbjct: 327 EYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVD 386 Query: 1219 FEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVIPNISKFL 1359 EP++G+PY+L+RPEGL VQKGSVLSKVPLLHLHCRE+V+PNI+KF+ Sbjct: 387 VEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFI 433 >ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana] gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA pseudouridine synthase 3, mitochondrial; AltName: Full=RNA pseudouridylate synthase 3; AltName: Full=RNA-uridine isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis thaliana] gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine synthase 3 [Arabidopsis thaliana] Length = 478 Score = 554 bits (1427), Expect = e-155 Identities = 277/427 (64%), Positives = 338/427 (79%), Gaps = 5/427 (1%) Frame = +1 Query: 94 VRWLSRVAPPAPVKAEPIIRVSNNIARLGEPKRAPKPRQLLSLPPFPNSGTEPLPGRKKS 273 +R SRVAPP +IRV+NN+A LG PK+ P PRQL+SLPPFP PLPG K+ Sbjct: 17 IRRYSRVAPPP----SSVIRVTNNVAHLGPPKQGPLPRQLISLPPFPG---HPLPG--KN 67 Query: 274 AGSCGKQR----RVTAISWVKHYFADIEEEAIRWHFNKGLVYIE-SSNQDNQAKENNFTC 438 AG+ G VTAISWVK+YF +I ++AI+ HF KGLV +E +D ++ + Sbjct: 68 AGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGAI 127 Query: 439 SLEKIKHDHVMESGVRIHLPVSVGETKITKRYSTIPTATLNPNADEIEYMKRLVIHKDSA 618 + KIKH+ VM+ G +I LPVS+ E +I+KRY TIP+ TL PNADEI Y++RLV KDSA Sbjct: 128 PMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSA 187 Query: 619 IFVLNKPPKVPVNGNLPVHNSMDILAAAALSNGSDQGPKLVHRLDRESSGLLLMGRTKES 798 I VLNKPPK+PV GN+P+HNSMD LAAAALS G+D+GP+LVHRLDRE+SGLL+MGRTKES Sbjct: 188 IIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKES 247 Query: 799 FTRLHWLFTNVNLAKSSSEIWNNACEATMQRYWALVIGTPKEKEGVISAPLTKVVLNDGK 978 LH +F++ SS + WN ACEA Q+YWALVIG+PKEKEG+ISAPL+KV+L+DGK Sbjct: 248 IDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGK 307 Query: 979 GERVILAHPSGIDGSQEATTEYRVMGPTINGCSWIELCPLTSRKHQLRVHCAEALGTPIV 1158 +RV+LA SG + SQ+A TEY+V+GP INGCSW+EL P+TSRKHQLRVHCAEALGTPIV Sbjct: 308 TDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIV 367 Query: 1159 GDYKYGWFVQQRWKQMPRQDFEPSSGEPYKLRRPEGLAVQKGSVLSKVPLLHLHCREMVI 1338 GDYKYGWFV +RWKQMP+ D EP++G+PYKLRRPEGL VQKGSVLSKVPLLHLHCREMV+ Sbjct: 368 GDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVL 427 Query: 1339 PNISKFL 1359 PNI+KFL Sbjct: 428 PNIAKFL 434