BLASTX nr result

ID: Zingiber24_contig00025253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00025253
         (255 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94188.1| predicted protein [Hordeum vulgare subsp. vulgar...    57   3e-06
dbj|BAD52461.1| hypothetical protein [Oryza sativa Japonica Grou...    57   3e-06
ref|XP_002455253.1| hypothetical protein SORBIDRAFT_03g007240 [S...    57   3e-06
ref|NP_001142634.1| uncharacterized protein LOC100274910 [Zea ma...    57   3e-06

>dbj|BAJ94188.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326503702|dbj|BAJ86357.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 133

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
 Frame = +3

Query: 6   MDASSSQRKRRGGGDDRLPSKPRPASSSLPRGEKGPAASEEDVEEFFAILRRMRDASQSV 185
           MDA S+  KR+     R  S    A+++ P G      S+ +VEEF+AILRRMRDAS+ +
Sbjct: 1   MDAPSATAKRK-----RSSSSSAAAAATAPVGVDD--VSDAEVEEFYAILRRMRDASRRL 53

Query: 186 AVGRGTAASDR---------WRPSFEWEDF 248
             G   AA+ R         W PSF WEDF
Sbjct: 54  VSGGVAAATARAAPAPRAPAWCPSFSWEDF 83


>dbj|BAD52461.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|53791434|dbj|BAD52486.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 127

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 42/81 (51%)
 Frame = +3

Query: 6   MDASSSQRKRRGGGDDRLPSKPRPASSSLPRGEKGPAASEEDVEEFFAILRRMRDASQSV 185
           MDA+++ +++R    D     P                S+ +VEEF+AILRRMRDA++ +
Sbjct: 1   MDATTTAKRKRPAASDIADDAPTTVDE----------VSDAEVEEFYAILRRMRDATRRL 50

Query: 186 AVGRGTAASDRWRPSFEWEDF 248
                   +  WRPSF WEDF
Sbjct: 51  GARPPPPRAPAWRPSFSWEDF 71


>ref|XP_002455253.1| hypothetical protein SORBIDRAFT_03g007240 [Sorghum bicolor]
           gi|241927228|gb|EES00373.1| hypothetical protein
           SORBIDRAFT_03g007240 [Sorghum bicolor]
          Length = 139

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +3

Query: 6   MDASSSQRKRRGGGDDRLPSKPRPASSSLPRGEKGPAASEEDVEEFFAILRRMRDASQSV 185
           MDA+++  KR+    D        A++ +   E    AS+ +VEEF+AILRR+RDAS+ +
Sbjct: 1   MDATTATAKRKRPDTDITGDAAAAAAAPVAVDE----ASDAEVEEFYAILRRIRDASRRL 56

Query: 186 AVGRGTAASDR---WRPSFEWEDF 248
                  A+ R   WRPSF WEDF
Sbjct: 57  CGAGARPAAPRAPAWRPSFSWEDF 80


>ref|NP_001142634.1| uncharacterized protein LOC100274910 [Zea mays]
           gi|195607634|gb|ACG25647.1| hypothetical protein [Zea
           mays]
          Length = 148

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +3

Query: 6   MDASSSQ-RKRRGGGDDRLPSKPRPASSSLPRGEKGPAASEEDVEEFFAILRRMRDASQS 182
           MDAS++  R++R   D  +      A+++         AS+ +VEEF+AILRR+RDAS+ 
Sbjct: 1   MDASAATGRRKRKRPDADITGDAAAAAAAAAAPVAVDEASDAEVEEFYAILRRIRDASRR 60

Query: 183 V--AVGRGTAASDRWRPSFEWEDF 248
           +  A  R    +  WRPSF WEDF
Sbjct: 61  LCGAGARPAPRAPAWRPSFSWEDF 84


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