BLASTX nr result
ID: Zingiber24_contig00025229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00025229
(269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|2235292... 47 8e-07
ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512... 49 8e-07
gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus] 49 1e-06
gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium] gi|462422921|g... 49 1e-06
ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [V... 49 1e-06
ref|XP_004144851.1| PREDICTED: SKP1-like protein 1B-like [Cucumi... 49 1e-06
emb|CCG34082.1| SCF ubiquitin ligase [uncultured eukaryote] 50 2e-06
ref|XP_006435227.1| hypothetical protein CICLE_v10002751mg [Citr... 49 2e-06
gb|EXB60668.1| SKP1-like protein 1B [Morus notabilis] 49 2e-06
ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi... 49 2e-06
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512... 49 2e-06
ref|XP_002305525.2| E3 ubiquitin ligase SCF complex subunit SKP1... 47 2e-06
ref|XP_002976912.1| hypothetical protein SELMODRAFT_271223 [Sela... 49 3e-06
gb|AAD34458.1| Skp1 [Medicago sativa] 49 3e-06
dbj|BAE72121.1| SKP1-like protein [Silene latifolia] 49 4e-06
gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid culti... 49 4e-06
ref|XP_002301954.1| hypothetical protein POPTR_0002s02020g [Popu... 48 4e-06
gb|ACB87913.1| SKP1-like protein 1 [Malus domestica] 47 4e-06
gb|AGV54260.1| SKP1-like protein [Phaseolus vulgaris] gi|5610312... 49 4e-06
ref|XP_004512164.1| PREDICTED: SKP1-like protein 1A-like [Cicer ... 49 4e-06
>ref|XP_002531150.1| skp1, putative [Ricinus communis] gi|223529263|gb|EEF31235.1| skp1,
putative [Ricinus communis]
Length = 161
Score = 47.4 bits (111), Expect(2) = 8e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++ L T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 109 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 161
Score = 31.2 bits (69), Expect(2) = 8e-07
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD E VK++ S+L+DL +++
Sbjct: 81 DDELKAWDAEFVKVDQSTLFDLILAA 106
>ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1,
putative [Ricinus communis]
Length = 157
Score = 48.9 bits (115), Expect(2) = 8e-07
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 29.6 bits (65), Expect(2) = 8e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD E VK++ ++L+DL +++
Sbjct: 77 DDDLKAWDAEFVKVDQATLFDLILAA 102
>gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]
Length = 157
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD + VK++ ++L+DL +++
Sbjct: 77 DDELKAWDADFVKVDQATLFDLILAA 102
>gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium] gi|462422921|gb|EMJ27184.1|
hypothetical protein PRUPE_ppa012755mg [Prunus persica]
Length = 156
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 104 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 156
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD + VK++ ++L+DL +++
Sbjct: 76 DEDLKAWDTDFVKIDQATLFDLILAA 101
>ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [Vitis vinifera]
gi|147788379|emb|CAN76662.1| hypothetical protein
VITISV_040452 [Vitis vinifera]
Length = 156
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 104 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 156
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD + VK++ ++L+DL +++
Sbjct: 76 DEELKAWDADFVKVDQATLFDLILAA 101
>ref|XP_004144851.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
gi|449508821|ref|XP_004163420.1| PREDICTED: SKP1-like
protein 1B-like [Cucumis sativus]
Length = 155
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 103 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 155
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L WD E VK++ ++L+DL +++
Sbjct: 75 DDTLKTWDAEFVKVDQNTLFDLILAA 100
>emb|CCG34082.1| SCF ubiquitin ligase [uncultured eukaryote]
Length = 158
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L +++L T+ADMI+GK P GI + + IKNDF P+EEE RR+N W F+
Sbjct: 106 LNIKNLLDLTCQTVADMIKGKTPEGIRKTFN-IKNDFTPEEEEEVRRENPWAFE 158
Score = 26.9 bits (58), Expect(2) = 2e-06
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = +2
Query: 11 LSAWDKELVKLNPSSLYDLFISS 79
+ WD+E VK++ ++L+DL +++
Sbjct: 81 IKTWDQEFVKVDQATLFDLILAA 103
>ref|XP_006435227.1| hypothetical protein CICLE_v10002751mg [Citrus clementina]
gi|568839457|ref|XP_006473700.1| PREDICTED: SKP1-like
protein 1B-like [Citrus sinensis]
gi|557537349|gb|ESR48467.1| hypothetical protein
CICLE_v10002751mg [Citrus clementina]
Length = 158
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 106 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 158
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD + VK++ ++L+DL +++
Sbjct: 78 DDDLKAWDTDFVKVDQATLFDLILAA 103
>gb|EXB60668.1| SKP1-like protein 1B [Morus notabilis]
Length = 157
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L AWD + VK++ ++L+DL +++
Sbjct: 77 DDDLKAWDADFVKVDQATLFDLILAA 102
>ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like
protein 1B-like [Cucumis sativus]
Length = 157
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L WD E VK++ ++L+DL +++
Sbjct: 77 DDDLKTWDSEFVKVDQATLFDLILAA 102
>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
putative [Ricinus communis]
Length = 157
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L WD E VK++ ++L+DL +++
Sbjct: 77 DDELKTWDAEFVKVDQATLFDLILAA 102
>ref|XP_002305525.2| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
[Populus trichocarpa] gi|118481770|gb|ABK92824.1|
unknown [Populus trichocarpa]
gi|550341306|gb|EEE86036.2| E3 ubiquitin ligase SCF
complex subunit SKP1/ASK1 family protein [Populus
trichocarpa]
Length = 161
Score = 47.4 bits (111), Expect(2) = 2e-06
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++ L T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 109 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 161
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D +L +WD E VK++ ++L+DL +++
Sbjct: 81 DESLKSWDTEFVKVDQNTLFDLILAA 106
>ref|XP_002976912.1| hypothetical protein SELMODRAFT_271223 [Selaginella moellendorffii]
gi|302797745|ref|XP_002980633.1| hypothetical protein
SELMODRAFT_154042 [Selaginella moellendorffii]
gi|300151639|gb|EFJ18284.1| hypothetical protein
SELMODRAFT_154042 [Selaginella moellendorffii]
gi|300155390|gb|EFJ22022.1| hypothetical protein
SELMODRAFT_271223 [Selaginella moellendorffii]
Length = 157
Score = 48.9 bits (115), Expect(2) = 3e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L +R+L T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIRNLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 27.7 bits (60), Expect(2) = 3e-06
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 11 LSAWDKELVKLNPSSLYDLFISS 79
+ AWD E VK++ ++L+DL +++
Sbjct: 80 IKAWDAEFVKVDQATLFDLILAA 102
>gb|AAD34458.1| Skp1 [Medicago sativa]
Length = 153
Score = 48.9 bits (115), Expect(2) = 3e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 101 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFSPEEEEEVRRENQWAFE 153
Score = 27.7 bits (60), Expect(2) = 3e-06
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 11 LSAWDKELVKLNPSSLYDLFISS 79
L +WD E VK++ ++L+DL +++
Sbjct: 76 LKSWDSEFVKVDQATLFDLILAA 98
>dbj|BAE72121.1| SKP1-like protein [Silene latifolia]
Length = 173
Score = 48.9 bits (115), Expect(2) = 4e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 121 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 173
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L WD E VK++ ++L+DL +++
Sbjct: 93 DDDLKNWDTEFVKVDQNTLFDLILAA 118
>gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid cultivar]
Length = 167
Score = 48.9 bits (115), Expect(2) = 4e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 115 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 167
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L WD + VK++ ++L+DL +++
Sbjct: 87 DEELKVWDADFVKVDQTTLFDLILAA 112
>ref|XP_002301954.1| hypothetical protein POPTR_0002s02020g [Populus trichocarpa]
gi|118485200|gb|ABK94461.1| unknown [Populus
trichocarpa] gi|222843680|gb|EEE81227.1| hypothetical
protein POPTR_0002s02020g [Populus trichocarpa]
Length = 157
Score = 47.8 bits (112), Expect(2) = 4e-06
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L +++L T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 105 LNIKNLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 157
Score = 28.5 bits (62), Expect(2) = 4e-06
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 2 DPALSAWDKELVKLNPSSLYDLFISS 79
D L +WD E VK++ ++L+DL +++
Sbjct: 77 DDDLKSWDAEFVKVDQATLFDLILAA 102
>gb|ACB87913.1| SKP1-like protein 1 [Malus domestica]
Length = 156
Score = 47.0 bits (110), Expect(2) = 4e-06
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + I NDF P+EEE RR+N W F+
Sbjct: 104 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-INNDFTPEEEEEVRRENQWAFE 156
Score = 29.3 bits (64), Expect(2) = 4e-06
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +2
Query: 11 LSAWDKELVKLNPSSLYDLFISS 79
L AWD+E VK++ ++L+DL +++
Sbjct: 79 LKAWDQEFVKVDQATLFDLILAA 101
>gb|AGV54260.1| SKP1-like protein [Phaseolus vulgaris] gi|561031299|gb|ESW29878.1|
hypothetical protein PHAVU_002G106100g [Phaseolus
vulgaris]
Length = 155
Score = 48.9 bits (115), Expect(2) = 4e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 103 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 155
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 11 LSAWDKELVKLNPSSLYDLFISS 79
L AWD + VK++ ++L+DL +++
Sbjct: 78 LKAWDADFVKVDQATLFDLILAA 100
>ref|XP_004512164.1| PREDICTED: SKP1-like protein 1A-like [Cicer arietinum]
Length = 155
Score = 48.9 bits (115), Expect(2) = 4e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 52 LPLRSLHLFMAATLADMIRGKEPGGICRLLSCIKNDFPPKEEEAGRRKNSWIFK 213
L ++SL T+ADMI+GK P I + + IKNDF P+EEE RR+N W F+
Sbjct: 103 LNIKSLLDLTCQTVADMIKGKTPEEIRKTFN-IKNDFTPEEEEEVRRENQWAFE 155
Score = 27.3 bits (59), Expect(2) = 4e-06
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 11 LSAWDKELVKLNPSSLYDLFISS 79
L AWD + VK++ ++L+DL +++
Sbjct: 78 LKAWDADFVKVDQATLFDLILAA 100