BLASTX nr result

ID: Zingiber24_contig00025142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00025142
         (238 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004299247.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   2e-07
gb|EMJ12070.1| hypothetical protein PRUPE_ppa003191mg [Prunus pe...    60   3e-07
ref|XP_003609125.1| DEAD-box ATP-dependent RNA helicase [Medicag...    57   3e-06
ref|XP_003609072.1| DEAD-box ATP-dependent RNA helicase [Medicag...    57   3e-06
ref|XP_006579722.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   3e-06
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   1e-05

>ref|XP_004299247.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Fragaria
           vesca subsp. vesca]
          Length = 599

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQS-GDDTRQFVRH 130
           KFRK +R+ DG RHGI+  NPYGRQ+ GDDTRQFVRH
Sbjct: 563 KFRKNVRKVDGKRHGINPGNPYGRQNGGDDTRQFVRH 599


>gb|EMJ12070.1| hypothetical protein PRUPE_ppa003191mg [Prunus persica]
          Length = 594

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/37 (75%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQ-SGDDTRQFVRH 130
           KFRKKMR+ +GSR+G S SNPYGRQ  GDD RQFVRH
Sbjct: 558 KFRKKMRKVEGSRNGFSESNPYGRQKGGDDKRQFVRH 594


>ref|XP_003609125.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355510180|gb|AES91322.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 71

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQSGDDTRQFVRH 130
           K RKK RR DGSRHG + +NPYG+++ DD RQFVRH
Sbjct: 36  KQRKKTRRVDGSRHGFNPNNPYGKRNADDKRQFVRH 71


>ref|XP_003609072.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355510127|gb|AES91269.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 59

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQSGDDTRQFVRH 130
           K RKK RR DGSRHG + +NPYG+++ DD RQFVRH
Sbjct: 24  KQRKKTRRVDGSRHGFNPNNPYGKRNADDKRQFVRH 59


>ref|XP_006579722.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like isoform X2
           [Glycine max]
          Length = 473

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQSGDDTRQFVRH 130
           K R KMR+ DGSRHG + +NPYG+++ DD RQFVRH
Sbjct: 438 KQRNKMRKVDGSRHGFNDNNPYGKKNADDKRQFVRH 473


>ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like isoform X1
           [Glycine max]
          Length = 572

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQSGDDTRQFVRH 130
           K R KMR+ DGSRHG + +NPYG+++ DD RQFVRH
Sbjct: 537 KQRNKMRKVDGSRHGFNDNNPYGKKNADDKRQFVRH 572


>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 575

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -2

Query: 237 KFRKKMRRTDGSRHGISSSNPYGRQSGDDTRQFVRH 130
           K R KMR+ DGSRHG S  NPYG+++ DD RQFVR+
Sbjct: 540 KQRNKMRKVDGSRHGFSGDNPYGKRNADDKRQFVRY 575


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