BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00025011
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S...   248   9e-64
ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g...   246   3e-63
gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hy...   246   4e-63
dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]    246   5e-63
ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   245   8e-63
ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea ma...   244   1e-62
gb|ACG35732.1| nucleic acid binding protein [Zea mays]                244   2e-62
ref|XP_003570477.1| PREDICTED: KH domain-containing protein At5g...   242   7e-62
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...   241   2e-61
ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [A...   238   7e-61
gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays]        238   7e-61
gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indi...   238   7e-61
ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g...   237   2e-60
gb|EMJ06848.1| hypothetical protein PRUPE_ppa009341mg [Prunus pe...   237   2e-60
ref|XP_002299073.2| KH domain-containing family protein [Populus...   235   6e-60
ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g...   235   8e-60
gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobro...   234   2e-59
ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g...   233   3e-59
ref|XP_004294880.1| PREDICTED: KH domain-containing protein At5g...   232   5e-59
ref|XP_006647814.1| PREDICTED: KH domain-containing protein At5g...   232   7e-59

>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
           gi|241934199|gb|EES07344.1| hypothetical protein
           SORBIDRAFT_04g029520 [Sorghum bicolor]
          Length = 286

 Score =  248 bits (633), Expect = 9e-64
 Identities = 132/204 (64%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I G+RTP  A+ EQEKYL ELLAER KL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIGGLRTPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEILRV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQSE     
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNGWTSAFQSESSPAY 120

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P YNFVGR+LGPRGNSLKR+E
Sbjct: 121 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTYNFVGRILGPRGNSLKRVE 169

Query: 74  AITACRVLIRGRGSIKDPAREEMM 3
           A T CRVLIRGRGSIKDPAREEMM
Sbjct: 170 ANTDCRVLIRGRGSIKDPAREEMM 193


>ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g56140-like [Setaria
           italica]
          Length = 286

 Score =  246 bits (629), Expect = 3e-63
 Identities = 131/204 (64%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I+G+R P  A+ EQEKYL ELLAER KL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEILRV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQSE     
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNGWTSAFQSESSPAY 120

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P YNFVGR+LGPRGNSLKR+E
Sbjct: 121 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTYNFVGRILGPRGNSLKRVE 169

Query: 74  AITACRVLIRGRGSIKDPAREEMM 3
           A T CRVLIRGRGSIKDPAREEMM
Sbjct: 170 ANTDCRVLIRGRGSIKDPAREEMM 193


>gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hypothetical protein
           ZEAMMB73_233372 [Zea mays]
          Length = 286

 Score =  246 bits (628), Expect = 4e-63
 Identities = 131/204 (64%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I G+RTP  A+ EQEKYL+ELLAER KL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEI RV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQSE     
Sbjct: 61  RLLNQEIFRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNGWPSAFQSESSPAY 120

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P YNFVGR+LGPRGNSLKR+E
Sbjct: 121 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTYNFVGRILGPRGNSLKRVE 169

Query: 74  AITACRVLIRGRGSIKDPAREEMM 3
           A T CRVLIRGRGSIKDPAREEMM
Sbjct: 170 ANTDCRVLIRGRGSIKDPAREEMM 193


>dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 287

 Score =  246 bits (627), Expect = 5e-63
 Identities = 133/205 (64%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P ISG+R    A+ +QEKYL ELLAER KLNPFVPVLPHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSI 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEILRV+ LLENASLL+QSGFEHGSPL +GGL+ NG   DMN W SAFQSE     
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGFEHGSPLTSGGLYSNGAATDMNGWTSAFQSESSSAA 120

Query: 248 ---LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRL 78
              LG  Q S+            GL+ KKT+RVDIPVD++P YNFVGR+LGPRGNSLKR+
Sbjct: 121 YSWLGGSQGSS-----------SGLIGKKTMRVDIPVDKYPTYNFVGRILGPRGNSLKRV 169

Query: 77  EAITACRVLIRGRGSIKDPAREEMM 3
           EA T CRVLIRGRGSIKDPARE+MM
Sbjct: 170 EATTDCRVLIRGRGSIKDPAREDMM 194


>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score =  245 bits (625), Expect = 8e-63
 Identities = 130/198 (65%), Positives = 150/198 (75%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           PHI+G+R+   A+ EQEKYL+ELLAER KL+PF+PVLPHS+
Sbjct: 1   MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTL 237
            LLNQEILRVT LL NAS+LDQSG EH SPL +GG+F NGG A++N WAS FQSE  G  
Sbjct: 61  RLLNQEILRVTTLLGNASILDQSGLEHASPLASGGIFSNGG-ANVNGWASPFQSEMSGL- 118

Query: 236 QPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACR 57
             S             GL++K+TIRVDIPV++FP+YNFVGRLLGPRGNSLKR+EA T CR
Sbjct: 119 --SAAQNWLGSQGSSSGLIVKRTIRVDIPVEKFPSYNFVGRLLGPRGNSLKRMEATTECR 176

Query: 56  VLIRGRGSIKDPAREEMM 3
           VLIRGRGSIKDPAREEMM
Sbjct: 177 VLIRGRGSIKDPAREEMM 194


>ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea mays]
           gi|194703026|gb|ACF85597.1| unknown [Zea mays]
           gi|413938647|gb|AFW73198.1| nucleic acid binding protein
           [Zea mays]
          Length = 286

 Score =  244 bits (624), Expect = 1e-62
 Identities = 131/204 (64%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I+G+R P  A+ EQEKYL ELLAERQKL PFVPV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERQKLGPFVPVIPHSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEILRV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQ E     
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNVWTSAFQPESSPAY 120

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P +NFVGR+LGPRGNSLKR+E
Sbjct: 121 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVE 169

Query: 74  AITACRVLIRGRGSIKDPAREEMM 3
           A T CRVLIRGRGSIKDPAREEMM
Sbjct: 170 ANTDCRVLIRGRGSIKDPAREEMM 193


>gb|ACG35732.1| nucleic acid binding protein [Zea mays]
          Length = 286

 Score =  244 bits (622), Expect = 2e-62
 Identities = 131/204 (64%), Positives = 148/204 (72%), Gaps = 6/204 (2%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I+G+R P  A+ EQEKYL ELLAERQKL PFVPV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAMAEQEKYLAELLAERQKLGPFVPVIPHSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEILRV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQ E     
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNVWTSAFQPESSPAY 120

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P +NFVGR+LGPRGNSLKR+E
Sbjct: 121 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVE 169

Query: 74  AITACRVLIRGRGSIKDPAREEMM 3
           A T CRVLIRGRGSIKDPAREEMM
Sbjct: 170 ANTDCRVLIRGRGSIKDPAREEMM 193


>ref|XP_003570477.1| PREDICTED: KH domain-containing protein At5g56140-like
           [Brachypodium distachyon]
          Length = 283

 Score =  242 bits (617), Expect = 7e-62
 Identities = 129/199 (64%), Positives = 144/199 (72%), Gaps = 6/199 (3%)
 Frame = -3

Query: 581 YMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSFHLLNQ 402
           YMA           P ISG+R    A+ +QEKYL+ELLAER KLNPFVPVLPHS  LLNQ
Sbjct: 3   YMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLSELLAERHKLNPFVPVLPHSIRLLNQ 62

Query: 401 EILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER------LGT 240
           EILRV+ LLENASLL+QSGFEHGSPL +GGL+ NG   DMN W SAFQSE       LG 
Sbjct: 63  EILRVSSLLENASLLNQSGFEHGSPLTSGGLYSNGAATDMNGWTSAFQSESSSAYSWLGG 122

Query: 239 LQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITAC 60
            Q S+              V+KKT+RVDIPVD++P YNFVGR+LGPRGNSLKR+EA T C
Sbjct: 123 SQGSSSGP-----------VVKKTLRVDIPVDKYPTYNFVGRILGPRGNSLKRVEATTDC 171

Query: 59  RVLIRGRGSIKDPAREEMM 3
           RVLIRGRGSIKDPAREEMM
Sbjct: 172 RVLIRGRGSIKDPAREEMM 190


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  241 bits (614), Expect = 2e-61
 Identities = 120/178 (67%), Positives = 144/178 (80%)
 Frame = -3

Query: 536 HISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSFHLLNQEILRVTKLLENASLL 357
           H+SG+R+   A+ EQEKYL+ELLAER KL+PF+PVLPH++ LL+QEILRVT LL NAS+L
Sbjct: 31  HLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLLSQEILRVTTLLGNASVL 90

Query: 356 DQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTLQPSTRXXXXXXXXXXXGLVI 177
            QSG EH SPL +GG+F NGG AD N WAS FQSE  G +QPS+            GL++
Sbjct: 91  GQSGLEHASPLASGGMFSNGG-ADANGWASRFQSEMSGLIQPSSAQNWLSSQGSSSGLIV 149

Query: 176 KKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACRVLIRGRGSIKDPAREEMM 3
           K+TIRVDIP++++P+YNFVGRLLGPRGNSLKR+EA T CRVLIRGRGSIKDPAREEMM
Sbjct: 150 KRTIRVDIPIERYPSYNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMM 207


>ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [Amborella trichopoda]
           gi|548861697|gb|ERN19068.1| hypothetical protein
           AMTR_s00061p00100880 [Amborella trichopoda]
          Length = 286

 Score =  238 bits (608), Expect = 7e-61
 Identities = 130/198 (65%), Positives = 148/198 (74%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA              S  R+   A+ EQ+KYL+ELLAERQKL PF+ VLPHS+
Sbjct: 1   MSSGRYMAYSPSPSTAPH----SPFRSAATALVEQDKYLSELLAERQKLGPFMQVLPHSY 56

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTL 237
            +LNQEI+RVT LL NASLLDQSG EH SPL +GGL+ NGG ADMN WA+ FQSERLG L
Sbjct: 57  RVLNQEIVRVTTLLGNASLLDQSGLEHASPLNSGGLYSNGG-ADMNGWATPFQSERLGIL 115

Query: 236 QPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACR 57
           Q  T            GL++K+TIRVDIPVD++PNYNFVGRLLGPRGNSLKR+EA T CR
Sbjct: 116 Q-QTGHGWLGSQGGSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEANTECR 174

Query: 56  VLIRGRGSIKDPAREEMM 3
           VLIRGRGSIKDPAREE+M
Sbjct: 175 VLIRGRGSIKDPAREELM 192


>gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays]
          Length = 197

 Score =  238 bits (608), Expect = 7e-61
 Identities = 127/200 (63%), Positives = 144/200 (72%), Gaps = 6/200 (3%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I G+RTP  A+ EQEKYL+ELLAER KL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEI RV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQSE     
Sbjct: 61  RLLNQEIFRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNGWPSAFQSESSPAY 120

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P YNFVGR+LGPRGNSLKR+E
Sbjct: 121 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTYNFVGRILGPRGNSLKRVE 169

Query: 74  AITACRVLIRGRGSIKDPAR 15
           A T CRVLIRGRGSIKDPAR
Sbjct: 170 ANTDCRVLIRGRGSIKDPAR 189


>gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indica Group]
           gi|215769394|dbj|BAH01623.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 286

 Score =  238 bits (608), Expect = 7e-61
 Identities = 127/198 (64%), Positives = 147/198 (74%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P I G+R    A+ +QEKYL ELLAER KL+PF+PVLP+S 
Sbjct: 1   MASGRYMAYSPSPSTTPHSPRIPGLRAASSAVADQEKYLAELLAERHKLSPFIPVLPNSV 60

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTL 237
            LLNQEILRV+ LLENASLL+QSG EHGSPL TGGL+ NG  ADMN W SAFQSE  G+ 
Sbjct: 61  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAAADMNGWTSAFQSE--GSP 118

Query: 236 QPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACR 57
             S R           GL++KKT++VDIPVD++P +NFVGR+LGPRGNSLKR+EA T CR
Sbjct: 119 AYSWR---GGSQGSSSGLIVKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVEATTDCR 175

Query: 56  VLIRGRGSIKDPAREEMM 3
           VLIRGRGSIKDPARE+MM
Sbjct: 176 VLIRGRGSIKDPAREDMM 193


>ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X2
           [Solanum tuberosum]
          Length = 289

 Score =  237 bits (604), Expect = 2e-60
 Identities = 122/198 (61%), Positives = 146/198 (73%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA            HI+G+R+   AI EQEKYL+ELLAER KL PFVPVLPH +
Sbjct: 1   MSSGRYMAYSPSPSAPQSP-HIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTL 237
            LLNQE+LRVT LL NAS+LDQ+G EH SPL +GG+F NGG A+++ WAS F SE  G +
Sbjct: 60  RLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGG-ANVDRWASPFHSEISGLM 118

Query: 236 QPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACR 57
              +            GL++K+T+R+DIPVDQ+P+YNFVGRLLGPRGNSLKR+EA T CR
Sbjct: 119 HSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSYNFVGRLLGPRGNSLKRVEATTECR 178

Query: 56  VLIRGRGSIKDPAREEMM 3
           VLIRGRGSIKDP +EEMM
Sbjct: 179 VLIRGRGSIKDPVKEEMM 196


>gb|EMJ06848.1| hypothetical protein PRUPE_ppa009341mg [Prunus persica]
          Length = 296

 Score =  237 bits (604), Expect = 2e-60
 Identities = 126/198 (63%), Positives = 145/198 (73%), Gaps = 3/198 (1%)
 Frame = -3

Query: 587 GRYMAXXXXXXXXXXXPHISGMRTPGGAI---GEQEKYLTELLAERQKLNPFVPVLPHSF 417
           GRYM+            H+SG+R+   A     EQEKYL+ELLAER KL PF+P+LPH  
Sbjct: 8   GRYMSYSPSPSAPHSP-HLSGLRSASSAALVAAEQEKYLSELLAERHKLGPFLPLLPHCC 66

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTL 237
            L+NQEILRVT LL NAS+L QSG EH SPL +GG+F NGG AD+N WAS FQSE  G L
Sbjct: 67  RLINQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGG-ADVNGWASRFQSEMSGLL 125

Query: 236 QPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACR 57
           QPS+            GL++K+TIRVDIPVD++PNYNFVGRLLGPRGNSLKR+EA T CR
Sbjct: 126 QPSSTQNWLNSPSSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEATTECR 185

Query: 56  VLIRGRGSIKDPAREEMM 3
           VLIRGRGSIKDP REEMM
Sbjct: 186 VLIRGRGSIKDPTREEMM 203


>ref|XP_002299073.2| KH domain-containing family protein [Populus trichocarpa]
           gi|550350090|gb|EEE83878.2| KH domain-containing family
           protein [Populus trichocarpa]
          Length = 302

 Score =  235 bits (600), Expect = 6e-60
 Identities = 125/199 (62%), Positives = 149/199 (74%), Gaps = 3/199 (1%)
 Frame = -3

Query: 590 SGRYMAXXXXXXXXXXXPHISGMRTPGGA---IGEQEKYLTELLAERQKLNPFVPVLPHS 420
           +GR+MA            HISG+R+   +   + EQEKYL+ELLAER K++PF+PVLP++
Sbjct: 13  AGRFMAYSPSPSAPHSP-HISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPNT 71

Query: 419 FHLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGT 240
           + LLNQEILRVT LL NAS+L QSG EH SPL +GG+F NG  AD N WAS FQSE  G 
Sbjct: 72  YRLLNQEILRVTMLLGNASVLGQSGLEHASPLASGGIFSNGA-ADANGWASRFQSEMSGI 130

Query: 239 LQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITAC 60
           LQPS+            GL++K+TIRVDIPVD++PNYNFVGRLLGPRGNSLKR+EA T C
Sbjct: 131 LQPSSAQNWLSSQGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTEC 190

Query: 59  RVLIRGRGSIKDPAREEMM 3
           RVLIRGRGSIKDPARE+MM
Sbjct: 191 RVLIRGRGSIKDPAREDMM 209


>ref|XP_004139764.1| PREDICTED: KH domain-containing protein At5g56140-like [Cucumis
           sativus] gi|449508337|ref|XP_004163285.1| PREDICTED: KH
           domain-containing protein At5g56140-like [Cucumis
           sativus]
          Length = 296

 Score =  235 bits (599), Expect = 8e-60
 Identities = 123/182 (67%), Positives = 143/182 (78%), Gaps = 4/182 (2%)
 Frame = -3

Query: 536 HISGMRTPGGA----IGEQEKYLTELLAERQKLNPFVPVLPHSFHLLNQEILRVTKLLEN 369
           H+ G+R+P  A    I EQEKYL+ELLAERQKL+PF+PVLP+S+ LLNQEILRVT LL  
Sbjct: 23  HLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMPVLPNSYRLLNQEILRVTTLLGK 82

Query: 368 ASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTLQPSTRXXXXXXXXXXX 189
           AS+L QSG EH SPL +GG+F NGG ADM++W S FQSE  G LQ S+            
Sbjct: 83  ASVLGQSGLEHASPLASGGIFSNGG-ADMSAWPSRFQSEMSGLLQASSAQNWLTSQGSSS 141

Query: 188 GLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACRVLIRGRGSIKDPAREE 9
           GL++K+TIRVD+PV+ FPNYNFVGRLLGPRGNSLKR+EA T CRVLIRGRGSIKDPAREE
Sbjct: 142 GLIVKRTIRVDVPVETFPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAREE 201

Query: 8   MM 3
           MM
Sbjct: 202 MM 203


>gb|EOY11853.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 312

 Score =  234 bits (596), Expect = 2e-59
 Identities = 125/200 (62%), Positives = 146/200 (73%), Gaps = 5/200 (2%)
 Frame = -3

Query: 587 GRYMAXXXXXXXXXXXPHISGMRTPGGAIG-----EQEKYLTELLAERQKLNPFVPVLPH 423
           GRYMA            H+SG+R+   A       +QEKYL+ELLAER KL+PF+PVLPH
Sbjct: 9   GRYMAYSPSPSAPHSP-HLSGLRSAAAAASSAAFLDQEKYLSELLAERHKLSPFMPVLPH 67

Query: 422 SFHLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLG 243
           ++ LLNQEILRVT LL NAS+L QSG E  SPL +GG+  NGG ADMN W S FQSE  G
Sbjct: 68  TYRLLNQEILRVTTLLGNASVLGQSGLEQASPLASGGILSNGG-ADMNGWTSRFQSEMSG 126

Query: 242 TLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITA 63
            +QPS+            GL++K+TIRVDIPV+++PNYNFVGRLLGPRGNSLKR+EA T 
Sbjct: 127 LVQPSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNYNFVGRLLGPRGNSLKRVEANTE 186

Query: 62  CRVLIRGRGSIKDPAREEMM 3
           CRVLIRGRGSIKDPAREEMM
Sbjct: 187 CRVLIRGRGSIKDPAREEMM 206


>ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 2
           [Solanum lycopersicum]
          Length = 295

 Score =  233 bits (594), Expect = 3e-59
 Identities = 123/202 (60%), Positives = 147/202 (72%), Gaps = 4/202 (1%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA            HI+G+R+   AI EQEKYL+ELLAER KL PFVPVLPH +
Sbjct: 1   MSSGRYMAYSPSPSAPQSP-HIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTL 237
            LLNQE+LRVT LL NAS+LDQ+G EH SPL +GG+F NGG A+++ WAS FQSE  G +
Sbjct: 60  RLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGG-ANVDRWASPFQSEISGLM 118

Query: 236 QPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPN----YNFVGRLLGPRGNSLKRLEAI 69
              +            GL++K+T+R+DIPVDQ+P+    YNFVGRLLGPRGNSLKR+EA 
Sbjct: 119 HSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSLPLQYNFVGRLLGPRGNSLKRVEAT 178

Query: 68  TACRVLIRGRGSIKDPAREEMM 3
           T CRVLIRGRGSIKDP +EEMM
Sbjct: 179 TECRVLIRGRGSIKDPVKEEMM 200


>ref|XP_004294880.1| PREDICTED: KH domain-containing protein At5g56140-like [Fragaria
           vesca subsp. vesca]
          Length = 297

 Score =  232 bits (592), Expect = 5e-59
 Identities = 125/197 (63%), Positives = 143/197 (72%), Gaps = 2/197 (1%)
 Frame = -3

Query: 587 GRYMAXXXXXXXXXXXPHISGMRTPGGA--IGEQEKYLTELLAERQKLNPFVPVLPHSFH 414
           GRYMA            HISG+R+   A  + EQEKYL+ELL ER KL PF+PVLP+ F 
Sbjct: 9   GRYMAYSPSLSAPLSP-HISGLRSSSAAALVAEQEKYLSELLGERHKLGPFLPVLPNCFR 67

Query: 413 LLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSERLGTLQ 234
           LLNQEILRVT LL NAS+L QSG EH SPL +GG+F NGG ADM+ WA+ FQSE    LQ
Sbjct: 68  LLNQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGG-ADMDGWATRFQSEMSTLLQ 126

Query: 233 PSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLEAITACRV 54
           P              GL++K+TIRVDIPVD++P YNFVGRLLGPRGNSLKR+EA T CRV
Sbjct: 127 PPPTQNWHGSQGSSSGLIVKRTIRVDIPVDKYPTYNFVGRLLGPRGNSLKRVEATTECRV 186

Query: 53  LIRGRGSIKDPAREEMM 3
           LIRGRGSIKDPARE+MM
Sbjct: 187 LIRGRGSIKDPAREDMM 203


>ref|XP_006647814.1| PREDICTED: KH domain-containing protein At5g56140-like [Oryza
           brachyantha]
          Length = 285

 Score =  232 bits (591), Expect = 7e-59
 Identities = 126/204 (61%), Positives = 147/204 (72%), Gaps = 6/204 (2%)
 Frame = -3

Query: 596 MDSGRYMAXXXXXXXXXXXPHISGMRTPGGAIGEQEKYLTELLAERQKLNPFVPVLPHSF 417
           M SGRYMA           P ISG+R    A+ +QEKYL++LLAER KL+PF+PVLP+S 
Sbjct: 1   MASGRYMAYSPSPSTTPHSPRISGLRA-SSAVADQEKYLSDLLAERHKLSPFIPVLPNSV 59

Query: 416 HLLNQEILRVTKLLENASLLDQSGFEHGSPLITGGLFPNGGVADMNSWASAFQSER---- 249
            LLNQEILRV+ LLENASLL+QSG EHGSPL TGGL+ NG   DMN W SAFQ E     
Sbjct: 60  RLLNQEILRVSTLLENASLLNQSGLEHGSPLTTGGLYSNGAATDMNGWTSAFQPESSPSY 119

Query: 248 --LGTLQPSTRXXXXXXXXXXXGLVIKKTIRVDIPVDQFPNYNFVGRLLGPRGNSLKRLE 75
             LG  Q S+            GL++KKT++VDIPVD++P +NFVGR+LGPRGNSLKR+E
Sbjct: 120 SWLGGSQGSS-----------SGLIVKKTMKVDIPVDKYPTFNFVGRILGPRGNSLKRVE 168

Query: 74  AITACRVLIRGRGSIKDPAREEMM 3
           A T CRVLIRGRGSIKDP REEMM
Sbjct: 169 ATTDCRVLIRGRGSIKDPTREEMM 192