BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00025007
         (753 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]     155   2e-35
gb|ESW11626.1| hypothetical protein PHAVU_008G046100g [Phaseolus...   152   2e-34
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   150   6e-34
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi...   149   1e-33
ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containi...   145   1e-32
ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   145   2e-32
ref|XP_002511599.1| pentatricopeptide repeat-containing protein,...   144   4e-32
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi...   143   7e-32
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   143   7e-32
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr...   142   2e-31
gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protei...   142   2e-31
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   142   2e-31
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr...   141   2e-31
ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containi...   141   3e-31
gb|EOX96449.1| Pentatricopeptide repeat superfamily protein isof...   139   8e-31
gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus...   139   1e-30
ref|XP_003611431.1| Pentatricopeptide repeat-containing protein ...   139   1e-30
ref|XP_004301025.1| PREDICTED: pentatricopeptide repeat-containi...   138   2e-30
gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus pe...   138   2e-30

>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
          Length = 686

 Score =  155 bits (391), Expect = 2e-35
 Identities = 82/196 (41%), Positives = 122/196 (62%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C   +A  EG+QIH L VK GF      VQ SL+  Y++   +  A K+FD+    DL
Sbjct: 127 KGCARLNAVPEGKQIHGLVVKIGFGLDK-FVQSSLVSMYSRCGEMGYARKVFDQMGEKDL 185

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           V  N LI G  R G++E A  +FD M E++  SW+ +VDG+++ G +++A+D+FD MP R
Sbjct: 186 VLWNCLIDGYARCGEVEIALQLFDEMPERDYFSWTCLVDGFSKCGRVEMARDVFDRMPSR 245

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SWN++I+GY++ G VE AR +FD +  R  V+TW +M++G+  N ++ EAL +F  M
Sbjct: 246 NLVSWNAMINGYMKSGDVEMARRLFDEMPTR-DVITWNSMIAGYEFNGKFMEALYLFIAM 304

Query: 49  QVAGVVPNKVTIVSIL 2
              G+VPN  T V  L
Sbjct: 305 LKEGLVPNHTTFVGAL 320


>gb|ESW11626.1| hypothetical protein PHAVU_008G046100g [Phaseolus vulgaris]
          Length = 602

 Score =  152 bits (383), Expect = 2e-34
 Identities = 81/196 (41%), Positives = 121/196 (61%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C  R A  EG Q+H + ++ G     + V  +L+  Y K   +D A K+FD       
Sbjct: 135 KGCSARVATREGPQLHGVVLRNG-VCFDLYVATALVDMYVKFGVLDSAKKVFDEMSVRSR 193

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           VS   +I+G  R GD+  AR +FD ME+++VV+++ M+DGYA+ G + LA++LFD M  +
Sbjct: 194 VSWTAVIVGYARCGDMGEARRLFDEMEDRDVVAFNAMIDGYAKTGCVGLARELFDKMGEK 253

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SW S+ISGY  +G VE AR +FD + D+  + TW AM+ G+ QN +  EALE+F +M
Sbjct: 254 NVVSWTSMISGYCGNGDVENARLMFDAMPDK-NLFTWNAMIGGYCQNRRSHEALELFREM 312

Query: 49  QVAGVVPNKVTIVSIL 2
           Q   V PN+VTI+ +L
Sbjct: 313 QTVLVEPNEVTILCVL 328



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 39/207 (18%)
 Frame = -3

Query: 505 VLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEE 326
           V+   +++  YAK   V  A +LFD+    ++VS   +I G C +GD+E AR++FD M +
Sbjct: 224 VVAFNAMIDGYAKTGCVGLARELFDKMGEKNVVSWTSMISGYCGNGDVENARLMFDAMPD 283

Query: 325 KNVVSWSLMVDGYARNGLLDLAQDLFDAMPV----------------------------- 233
           KN+ +W+ M+ GY +N     A +LF  M                               
Sbjct: 284 KNLFTWNAMIGGYCQNRRSHEALELFREMQTVLVEPNEVTILCVLPAVADLGALDLGGWI 343

Query: 232 -----RNQFSWNS-----LISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQ 83
                R +F  ++     LI  Y + G +  A+ +F+ + +R    +W A+++G   N  
Sbjct: 344 HRFAQRKKFDRSARVGTALIDMYAKCGEITKAKLVFEEMTER-ETASWNALINGFAVNGC 402

Query: 82  YKEALEVFHQMQVAGVVPNKVTIVSIL 2
            KEALEVF +M   G  PN+VT++++L
Sbjct: 403 AKEALEVFARMVEEGFRPNEVTMITVL 429


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  151 bits (382), Expect = 2e-34
 Identities = 74/193 (38%), Positives = 124/193 (64%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C    A +EG+QIH L +K GF     ++  SL+  Y+K   ++   K+FDR    D+
Sbjct: 122 KGCARLGALQEGKQIHGLVLKIGFGVDKFVLS-SLVSMYSKCGEIELCRKVFDRMEDKDV 180

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           VS N LI G  R G++E A  +F+ M EK+  SW++++DG +++G L+ A+D+FD MP+R
Sbjct: 181 VSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIR 240

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SWN++I+GY++ G    A+ +FD++ +R  +VTW +M++G+ +N Q+ +AL++F  M
Sbjct: 241 NSVSWNAMINGYMKAGDSNTAKELFDQMPER-SLVTWNSMITGYERNKQFTKALKLFEVM 299

Query: 49  QVAGVVPNKVTIV 11
               + PN  TI+
Sbjct: 300 LREDISPNYTTIL 312


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  150 bits (378), Expect = 6e-34
 Identities = 74/194 (38%), Positives = 122/194 (62%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C   HA +EG+QIH L +K GF  +   V  SL+  Y+K   +D A K+F      DL
Sbjct: 115 KGCARLHATKEGKQIHGLVLKLGFGLNK-FVSSSLVNMYSKCKDIDSAKKVFLSMDDKDL 173

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           VS N LI G  + G +E    +F+ M E+++ SW++++DG+++ G +D+A++LFD MP R
Sbjct: 174 VSWNSLIDGYVKCGQVELGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSR 233

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SWN++I+GY++ G    A  +FD++ ++  +++W +MV+G+  N ++KEAL++F  M
Sbjct: 234 NLVSWNAMINGYMKAGDFVLASELFDKMPEK-NLISWNSMVAGYDLNERFKEALDLFLTM 292

Query: 49  QVAGVVPNKVTIVS 8
                 PN  T+VS
Sbjct: 293 LERDFTPNHATLVS 306


>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 821

 Score =  149 bits (376), Expect = 1e-33
 Identities = 77/196 (39%), Positives = 126/196 (64%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           ++C    A  EG+Q+HALA+K G     + VQ SL+  Y+K  +++ A K+FD     DL
Sbjct: 262 KACARLGAVAEGKQVHALALKIGLGLE-MYVQSSLVSLYSKCGAIECARKVFDEMRERDL 320

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           V+ N LI G  R G ++ A  +F+ MEE++  SW+++VDG ++ G +  A+++F+ MP +
Sbjct: 321 VAWNSLIDGYARCGRVDVAVELFEEMEERDEFSWTVLVDGLSKCGHVKKAREVFERMPSK 380

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SWN++I+GY++ G  E AR +F R+G R  V++W +M+SG+  N ++ EALE+F ++
Sbjct: 381 NVVSWNAMINGYMKGGEFEKARELFGRMGSR-DVISWNSMISGYEFNGRFGEALELFREV 439

Query: 49  QVAGVVPNKVTIVSIL 2
               V P   T+VS+L
Sbjct: 440 LEEDVRPTPATLVSVL 455


>ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Glycine max]
          Length = 599

 Score =  145 bits (367), Expect = 1e-32
 Identities = 76/196 (38%), Positives = 119/196 (60%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C  R A  EG  +H + +K G     + V  +L+  Y K   +  A K+FD       
Sbjct: 133 KGCATRVATGEGTLLHGMVLKNG-VCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSK 191

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           VS   +I+G  R GD+  AR +FD ME++++V+++ M+DGY + G + LA++LF+ M  R
Sbjct: 192 VSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRER 251

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SW S++SGY  +G VE A+ +FD + ++  V TW AM+ G+ QN +  +ALE+F +M
Sbjct: 252 NVVSWTSMVSGYCGNGDVENAKLMFDLMPEK-NVFTWNAMIGGYCQNRRSHDALELFREM 310

Query: 49  QVAGVVPNKVTIVSIL 2
           Q A V PN+VT+V +L
Sbjct: 311 QTASVEPNEVTVVCVL 326



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 39/207 (18%)
 Frame = -3

Query: 505 VLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEE 326
           ++   +++  Y K+  V  A +LF+     ++VS   ++ G C +GD+E A+++FD+M E
Sbjct: 222 IVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPE 281

Query: 325 KNVVSWSLMVDGYARNGLLDLAQDLFDAMPV----------------------------- 233
           KNV +W+ M+ GY +N     A +LF  M                               
Sbjct: 282 KNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWI 341

Query: 232 ----------RNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQ 83
                     R+     +LI  Y + G +  A+  F+ + +R    +W A+++G   N  
Sbjct: 342 HRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTER-ETASWNALINGFAVNGC 400

Query: 82  YKEALEVFHQMQVAGVVPNKVTIVSIL 2
            KEALEVF +M   G  PN+VT++ +L
Sbjct: 401 AKEALEVFARMIEEGFGPNEVTMIGVL 427


>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  145 bits (365), Expect = 2e-32
 Identities = 86/229 (37%), Positives = 130/229 (56%), Gaps = 33/229 (14%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           ++C      + G+ +HA ++K G     V++  SL+  YAK  +V D+ K+FD     + 
Sbjct: 102 KACASLSIVKHGKALHAESIKNG-VDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNA 160

Query: 409 VSCN-------------------------------DLILGLCRSGDLEAARVIFDVM--E 329
           V+ N                               ++I G  RSGD E AR  FD +  E
Sbjct: 161 VTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSE 220

Query: 328 EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
            +NVV+W++MVDGYARN  ++ A+++F+ MP RN F+W+S+ISGY + G V+ AR+IFDR
Sbjct: 221 LRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDR 280

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVPNKVTIVSIL 2
           I  R  +V W +++SG+ QN   +EALE F +MQ  G  P++VTI S+L
Sbjct: 281 IPVR-NLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVL 328



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
 Frame = -3

Query: 475 YAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMV 296
           YA+   ++ A ++F+     +  + + +I G C+ G+++ AR IFD +  +N+V+W+ ++
Sbjct: 234 YARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLI 293

Query: 295 DGYARNGLLDLAQDLFDAMPVR-------------------------------------- 230
            GYA+NG  + A + F  M                                         
Sbjct: 294 SGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIK 353

Query: 229 -NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQ 53
            NQF  N L+  Y + G +  AR IF+ +  R     W +M+SG   + Q KEALE F +
Sbjct: 354 LNQFVLNGLVDMYAKCGDLANARLIFEGMAHR-NRACWNSMISGFAIHGQSKEALEFFGR 412

Query: 52  MQVAGVVPNKVTIVSIL 2
           M+ +   P+++T +S+L
Sbjct: 413 MEDSHEGPDEITFLSVL 429



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
 Frame = -3

Query: 490 SLLRTYAKLLSVDDALKLFDRC----CHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEK 323
           SL+  YA+    ++AL+ F +       PD V+   ++    + G L+A + I  +M  K
Sbjct: 291 SLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHK 350

Query: 322 ----NVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIF 155
               N    + +VD YA+ G L  A+ +F+ M  RN+  WNS+ISG+  HG+ + A   F
Sbjct: 351 GIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFF 410

Query: 154 DRIGDR---LGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGV 35
            R+ D       +T+ +++S           LE+F +M+  G+
Sbjct: 411 GRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEKYGL 453


>ref|XP_002511599.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548779|gb|EEF50268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 429

 Score =  144 bits (362), Expect = 4e-32
 Identities = 82/197 (41%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           +SC    A  EG +IH   +K GF    + V  +L+  YAK   +  A K+FD      +
Sbjct: 96  KSCGLNMAVWEGFEIHNHVLKMGFGLD-LYVSTALVDMYAKFGELCMARKMFDEMAERGV 154

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           VS   LI G  RSGD+  AR++FD M EK+  +++ M+DGY + G ++ AQ LFD MP R
Sbjct: 155 VSWTALIGGCMRSGDMGNARILFDQMPEKDSAAYNAMLDGYVKAGDMESAQSLFDKMPAR 214

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SW S+I GY   G V  AR++FD + +R  + +W AM+ G+ QN++  EAL++FH+M
Sbjct: 215 NVISWTSMIYGYCSGGDVLTARSLFDAMPER-NLFSWNAMIGGYSQNNKSHEALKLFHEM 273

Query: 49  QVAGVV-PNKVTIVSIL 2
           Q   +  P+KVT+VS+L
Sbjct: 274 QSRTLFEPDKVTVVSVL 290


>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Solanum lycopersicum]
          Length = 528

 Score =  143 bits (360), Expect = 7e-32
 Identities = 82/229 (35%), Positives = 129/229 (56%), Gaps = 33/229 (14%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           ++C        G+ +HA +VK GF  + V+V  +LL  Y K   +  A K+FD     ++
Sbjct: 48  KACASLSMLSLGKALHAESVKSGFDCN-VMVGTALLDMYGKCGEIRSARKVFDYMPERNV 106

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEK------------------------------- 323
           ++ N +I G  +SGD++ A ++F+ M EK                               
Sbjct: 107 ITWNAMIGGCIKSGDIKTAFLLFENMSEKTTVTWNEMIDGYARNGDMVMARSFFDRVPDE 166

Query: 322 --NVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
             NVV+WS+MVDGYA +G +D A++LF+ MP RN + W+S++SGY + G V+ A AIFDR
Sbjct: 167 SRNVVTWSVMVDGYASHGDMDAARELFEIMPTRNFYVWSSMVSGYFKKGDVKGAEAIFDR 226

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVPNKVTIVSIL 2
           +  R  +V W +++ G+ QN   +EALE F +MQ  G+ P++VT+VS+L
Sbjct: 227 MKMR-NLVNWNSLICGYTQNGLCEEALEAFTKMQDEGLEPDEVTVVSVL 274



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
 Frame = -3

Query: 475 YAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMV 296
           YA    +D A +LF+     +    + ++ G  + GD++ A  IFD M+ +N+V+W+ ++
Sbjct: 180 YASHGDMDAARELFEIMPTRNFYVWSSMVSGYFKKGDVKGAEAIFDRMKMRNLVNWNSLI 239

Query: 295 DGYARNGL-----------------------------------LDLAQDLFDAMPVR--- 230
            GY +NGL                                   LD+ +D+ + +  +   
Sbjct: 240 CGYTQNGLCEEALEAFTKMQDEGLEPDEVTVVSVLSACSQLALLDIGKDIHEMIIQKGIE 299

Query: 229 -NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQ 53
            NQ+  N L+  Y + G +  AR IF+ +  +     W +++SG   +    EA+  F +
Sbjct: 300 LNQYVLNGLVDMYAKCGDLSNARLIFEGMLLK-NDAAWNSLISGFANHGHCVEAINFFER 358

Query: 52  MQVAGVVPNKVTIVSIL 2
           M  +GV PN +T +S+L
Sbjct: 359 MASSGVKPNDITFLSVL 375



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 42/193 (21%)
 Frame = -3

Query: 499 VQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKN 320
           V  S++  Y K   V  A  +FDR    +LV+ N LI G  ++G  E A   F  M+++ 
Sbjct: 203 VWSSMVSGYFKKGDVKGAEAIFDRMKMRNLVNWNSLICGYTQNGLCEEALEAFTKMQDEG 262

Query: 319 ------------------------------VVSWSLMVDGYARNGLLDL---------AQ 257
                                         ++   + ++ Y  NGL+D+         A+
Sbjct: 263 LEPDEVTVVSVLSACSQLALLDIGKDIHEMIIQKGIELNQYVLNGLVDMYAKCGDLSNAR 322

Query: 256 DLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDRI---GDRLGVVTWTAMVSGHVQNS 86
            +F+ M ++N  +WNSLISG+  HG    A   F+R+   G +   +T+ +++S      
Sbjct: 323 LIFEGMLLKNDAAWNSLISGFANHGHCVEAINFFERMASSGVKPNDITFLSVLSACAHGG 382

Query: 85  QYKEALEVFHQMQ 47
             +E LE+F +M+
Sbjct: 383 LVEEGLEIFSRME 395


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  143 bits (360), Expect = 7e-32
 Identities = 75/196 (38%), Positives = 121/196 (61%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C      +EG+QIH LA+K GF  S V VQ SL+  Y+K   +D A K+FD     D+
Sbjct: 120 KGCARLGVVQEGKQIHGLALKIGFG-SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV 178

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           V  N LI G  R G+++ A  +F+ M E++  SW+++VDG ++ G ++ A+ LFD MP R
Sbjct: 179 VLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCR 238

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SWN++I+GY++ G  ++A  +F ++     +VTW  M++G+  N Q+ +A+++F  M
Sbjct: 239 NLVSWNAMINGYMKSGDFDSALELFYQM-PIWDLVTWNLMIAGYELNGQFMDAVKMFFMM 297

Query: 49  QVAGVVPNKVTIVSIL 2
              G  P+  T+VS+L
Sbjct: 298 LKLGSRPSHATLVSVL 313


>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
           gi|568830445|ref|XP_006469509.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
           gi|557550368|gb|ESR60997.1| hypothetical protein
           CICLE_v10014482mg [Citrus clementina]
          Length = 689

 Score =  142 bits (357), Expect = 2e-31
 Identities = 74/189 (39%), Positives = 120/189 (63%)
 Frame = -3

Query: 568 AAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLI 389
           A +EG+QIH L  K GF     ++  SL+  YAK   +D   ++FD     DLVS N LI
Sbjct: 137 AIKEGKQIHGLVFKLGFGFDKFVLS-SLVSMYAKFGEIDLGRRVFDVLDDKDLVSWNCLI 195

Query: 388 LGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNS 209
            G  + G++E A  +FD M E+++ SW+ +VDG+++ G +++A+++F  MP RN  SWN+
Sbjct: 196 DGYVKKGEVEVAMKLFDEMPERDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNA 255

Query: 208 LISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVP 29
           +I+GY++ G V++A  +F+ +  R  ++TW +M++G+  N ++ EALE F  M    V+P
Sbjct: 256 MINGYMKAGDVDSACELFNDMEIR-DLITWNSMIAGYELNGRFMEALEFFETMLRGDVLP 314

Query: 28  NKVTIVSIL 2
           N  T+VS L
Sbjct: 315 NDATLVSAL 323


>gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508717153|gb|EOY09050.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 631

 Score =  142 bits (357), Expect = 2e-31
 Identities = 71/170 (41%), Positives = 116/170 (68%), Gaps = 1/170 (0%)
 Frame = -3

Query: 508 SVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVME 329
           +V+   ++L   A+   V+DA  LFDR    D++S   ++ GL ++G ++ AR +FD M 
Sbjct: 172 NVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEARRVFDRMP 231

Query: 328 EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
           E+NVVSW+ M+ GY++N  LD A +LF+ MP RN  SWN++I+G++++G ++ A  +FD+
Sbjct: 232 ERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFDK 291

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVA-GVVPNKVTIVSIL 2
           +  R  VV+WT M++G+VQ+ Q +EAL++F +M    GV PN+ T VS+L
Sbjct: 292 V-PRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEGTFVSVL 340



 Score =  120 bits (300), Expect = 6e-25
 Identities = 66/159 (41%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
 Frame = -3

Query: 505 VLVQRSLLRTYAKLLSVDDALKLFDRC-CHPDLVSCNDLILGLCRSGDLEAARVIFDVME 329
           V+   +L+  Y KL  +++A +LFDR     ++V+   ++ G  RS  +  A+ +FD M 
Sbjct: 79  VITWTALISGYIKLGLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMP 138

Query: 328 EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
            KNVVSW+ MVDGY +NG++  A +LF  MP RN  SWN++++   + GRVE AR +FDR
Sbjct: 139 VKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDR 198

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVV 32
           +  R  V++WTAMV+G  +N +  EA  VF +M    VV
Sbjct: 199 MPKR-DVISWTAMVAGLAKNGKIDEARRVFDRMPERNVV 236



 Score =  107 bits (268), Expect = 3e-21
 Identities = 54/153 (35%), Positives = 97/153 (63%)
 Frame = -3

Query: 508 SVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVME 329
           +V+   ++L  Y +   + +A +LFD     ++VS N ++ G  ++G +  A  +F  M 
Sbjct: 110 NVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMP 169

Query: 328 EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
           E+NVVSW+ M+   A+ G ++ A+ LFD MP R+  SW ++++G  ++G+++ AR +FDR
Sbjct: 170 ERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEARRVFDR 229

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           + +R  VV+W AM++G+ QN +  EA E+F +M
Sbjct: 230 MPER-NVVSWNAMITGYSQNMKLDEAFELFERM 261



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = -3

Query: 340 DVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQ--FSWNSLISGYLRHGRVEAA 167
           D     +V   + ++   +  G +   + LFD MP R++   +W +LISGY++ G +E A
Sbjct: 39  DYSANSSVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEA 98

Query: 166 RAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVV 32
           R +FDR+  +  VVTWTAM+SG++++++  EA  +F +M V  VV
Sbjct: 99  RRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVV 143



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
 Frame = -3

Query: 565 AEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLIL 386
           A+ G+   A  V       +V+   +++  Y++ + +D+A +LF+R    +L S N +I 
Sbjct: 215 AKNGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMIT 274

Query: 385 GLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWN-- 212
           G  ++G+L+ A  +FD +  KNVVSW+ M+ GY ++   + A  +F  M   +    N  
Sbjct: 275 GFIQNGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEG 334

Query: 211 --------------------------------------SLISGYLRHGRVEAARAIF-DR 149
                                                 ++I+ Y + G + AAR +F D 
Sbjct: 335 TFVSVLSACSDLAGLFEGQQVHQTLAKTIYQCSEIVVSAIINMYSKCGELNAARRMFDDG 394

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVPNKVTIVSIL 2
           +  +  VV+W  M++ +  +    EA+ +F +M   G  PN  T V++L
Sbjct: 395 LISQRDVVSWNGMIAAYAHHGCGGEAISLFKKMSGFGFKPNGATYVALL 443


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  142 bits (357), Expect = 2e-31
 Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 2/198 (1%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAK--LLSVDDALKLFDRCCHP 416
           ++C  +      + IH    K GF    + V  SL+ +Y+K  LL V+ A+KLF      
Sbjct: 129 KACNGKGWLPTVQMIHCHVEKYGFFGD-LFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEK 187

Query: 415 DLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMP 236
           DLVS N +I GL ++GDL  AR +FD M E++ VSW+ ++DGY + G +  A +LF+ MP
Sbjct: 188 DLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMP 247

Query: 235 VRNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFH 56
            RN  SW++++SGY + G +E AR +FD++  +  +VTWT ++SG  +    KEA  +++
Sbjct: 248 ERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFK-NLVTWTIIISGFAEKGLAKEATTLYN 306

Query: 55  QMQVAGVVPNKVTIVSIL 2
           QM+ AG+ P+  T++SIL
Sbjct: 307 QMEAAGLKPDDGTLISIL 324



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 39/202 (19%)
 Frame = -3

Query: 490 SLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVS 311
           ++L  Y K   +  A  LF++    ++VS + ++ G C++GD+E AR++FD M  KN+V+
Sbjct: 225 TILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVT 284

Query: 310 WSLMVDGYARNGLLDLAQDLFDAMP----------------------------------- 236
           W++++ G+A  GL   A  L++ M                                    
Sbjct: 285 WTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIK 344

Query: 235 -VRNQFSWN---SLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEAL 68
            +R + S N   +L+  Y + GRV+ A +IF+ +  R  +V+W  M+ G   +   ++A+
Sbjct: 345 KIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMR-DLVSWNCMLQGLAMHGHGEKAI 403

Query: 67  EVFHQMQVAGVVPNKVTIVSIL 2
           ++F +MQ  G  P+KVT+++IL
Sbjct: 404 QLFSKMQQEGFKPDKVTLIAIL 425


>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
           gi|557096454|gb|ESQ36962.1| hypothetical protein
           EUTSA_v10002407mg [Eutrema salsugineum]
          Length = 784

 Score =  141 bits (356), Expect = 2e-31
 Identities = 73/200 (36%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           + C    A EEG+QIH  + K GF      VQ SL+  Y+K   +D A K+FD+    DL
Sbjct: 223 KGCSRLCAVEEGKQIHGFSTKLGFGFDK-FVQSSLVSFYSKCGLLDCARKVFDKMGEKDL 281

Query: 409 VSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR 230
           V+ N LI G  RSGD+E AR +FD +  ++  SW+ ++ G++++G ++ A+D+FD MP +
Sbjct: 282 VTWNSLIDGYARSGDVETARKLFDEIPRRDSYSWTALLHGFSKSGKIEAARDVFDKMPTK 341

Query: 229 NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           N  SWN++I+GY+R G  E+A  +F+ + +R  ++TW ++++G+    +++EAL +F +M
Sbjct: 342 NLVSWNAMINGYMRSGDFESACELFNTMPER-NLITWNSIIAGYEVYGRFEEALSMFLRM 400

Query: 49  ----QVAGVVPNKVTIVSIL 2
               +   + PN  T  S++
Sbjct: 401 LQEEEDDFIKPNNATFTSLI 420


>ref|XP_004292558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Fragaria vesca subsp. vesca]
          Length = 603

 Score =  141 bits (355), Expect = 3e-31
 Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 33/229 (14%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
           ++C    + + G+  HA  +K G     V V  SL+  YAK   + ++ K+FD     ++
Sbjct: 132 KACASLPSIKHGKSAHAECIKSGVICD-VSVGTSLVDMYAKCGDIIESRKVFDYMPERNV 190

Query: 409 VSCN-------------------------------DLILGLCRSGDLEAARVIFDVM--E 329
           VS N                               ++I G  R+GD  +AR +FD +  E
Sbjct: 191 VSWNAMIGGYWRNGDAASALSLFEKMSLRTYVTWVEMISGFARTGDTVSARRLFDQVPPE 250

Query: 328 EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
            KNV++W++MVDGY  NG +++A++LF+AMP RN F W+S+ISGY + G VE A+ IFDR
Sbjct: 251 LKNVITWTVMVDGYCSNGQMEMARELFEAMPQRNFFVWSSMISGYCKIGVVEEAKMIFDR 310

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVPNKVTIVSIL 2
           I  R  +V W +M+SG+ QN   +EAL+ F  MQ  G  P++ TIVS+L
Sbjct: 311 IPVR-NLVNWNSMISGYAQNGFCEEALKAFENMQAEGFEPDEFTIVSVL 358



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
 Frame = -3

Query: 562 EEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILG 383
           E  R++     +R F      V  S++  Y K+  V++A  +FDR    +LV+ N +I G
Sbjct: 271 EMARELFEAMPQRNF-----FVWSSMISGYCKIGVVEEAKMIFDRIPVRNLVNWNSMISG 325

Query: 382 LCRSGDLEAARVIFDVME-------EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVR-- 230
             ++G  E A   F+ M+       E  +VS   ++   +++GLLD+ +D+ + +     
Sbjct: 326 YAQNGFCEEALKAFENMQAEGFEPDEFTIVS---VLSACSQSGLLDVGKDIHNMLSHNRI 382

Query: 229 --NQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFH 56
             NQ   N+L+  Y + G +  AR IF+ + +R     W AM+S    + Q KEALE+F 
Sbjct: 383 KLNQIVHNALVDMYAKCGDLINARLIFEEMTER-NSACWNAMISSMAIHGQCKEALELFS 441

Query: 55  QMQVAGVVPNKVTIVSIL 2
           +M+ +   P+++T +++L
Sbjct: 442 RMEDSNEKPDEITFLAVL 459


>gb|EOX96449.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508704554|gb|EOX96450.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
            gi|508704555|gb|EOX96451.1| Pentatricopeptide repeat
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 890

 Score =  139 bits (351), Expect = 8e-31
 Identities = 85/198 (42%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
 Frame = -3

Query: 589  ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDL 410
            +SC    A  EG QIH   +K GF    + V  +LL  YAKL  +  A K+F+      L
Sbjct: 418  KSCALNMAIWEGLQIHNHVIKFGFCLD-LYVSTALLDMYAKLGIMGSARKVFEEMPERSL 476

Query: 409  VSCNDLILGLCRSGDLEAARVIFDVMEEK-NVVSWSLMVDGYARNGLLDLAQDLFDAMPV 233
            VS   LI G  ++GD+E A+ + D M EK + V ++ M+DGY + G L  A++LF+ M  
Sbjct: 477  VSWTALICGYAKAGDMERAKELLDEMPEKEDSVLYNAMIDGYVKLGDLVSARNLFNQMQD 536

Query: 232  RNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQ 53
            RN  SW S+I+GY   G VE+AR +FD + ++  +V+W AM+ G+ QN Q  EAL++FH+
Sbjct: 537  RNVISWTSMINGYCNSGDVESARLLFDSMPEK-NLVSWNAMIGGYCQNKQPHEALKLFHE 595

Query: 52   MQVAGVV-PNKVTIVSIL 2
            MQ +    P+KVTIVSIL
Sbjct: 596  MQSSTFFEPDKVTIVSIL 613



 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 40/207 (19%)
 Frame = -3

Query: 502  LVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEK 323
            ++  +++  Y KL  +  A  LF++    +++S   +I G C SGD+E+AR++FD M EK
Sbjct: 509  VLYNAMIDGYVKLGDLVSARNLFNQMQDRNVISWTSMINGYCNSGDVESARLLFDSMPEK 568

Query: 322  NVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFS-----------------------W- 215
            N+VSW+ M+ GY +N     A  LF  M     F                        W 
Sbjct: 569  NLVSWNAMIGGYCQNKQPHEALKLFHEMQSSTFFEPDKVTIVSILPAIADLGALDLGEWV 628

Query: 214  ----------------NSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQ 83
                              L+  Y + G +  A+ IF  + ++  + +W A+++G+  N  
Sbjct: 629  HHFVQRKKLDKAINVCTGLVDMYAKCGEINKAKRIFYEMPEK-EIASWNALINGYAVNGC 687

Query: 82   YKEALEVFHQMQVAGVVPNKVTIVSIL 2
             KEAL+VF +M+   V+PN VT++ +L
Sbjct: 688  AKEALQVFLEMRNERVMPNYVTMIGVL 714


>gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  139 bits (350), Expect = 1e-30
 Identities = 75/189 (39%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
 Frame = -3

Query: 565 AEEGRQIHALAVKRGFAASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLIL 386
           A  G    AL + R     +V+   +++ T  +   VDDA +LFD+    D+VS   ++ 
Sbjct: 140 ARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVA 199

Query: 385 GLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSL 206
           GL ++G +E AR +FD M  +NVVSW++MV GYA+NG L+ A +LF  MP RN  SWN++
Sbjct: 200 GLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTM 259

Query: 205 ISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVA-GVVP 29
           I+G++++G +  A  +F  +  +  V+TWTAM++G+VQ+   +EA++VF++M  A G+ P
Sbjct: 260 ITGFIQNGELNHAEKLFREMRVK-NVITWTAMMTGYVQHGLSEEAVKVFNKMLAADGLKP 318

Query: 28  NKVTIVSIL 2
           N  T V++L
Sbjct: 319 NTGTFVTVL 327



 Score =  108 bits (270), Expect = 2e-21
 Identities = 59/156 (37%), Positives = 97/156 (62%)
 Frame = -3

Query: 517 AASSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFD 338
           A  +V+   ++++ Y +L  V +A +LF      ++VS N ++ G  R+G  + A  +F 
Sbjct: 94  AKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFR 153

Query: 337 VMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAI 158
            M E+NVVSW+ ++    + G +D AQ LFD M  R+  SW ++++G  ++GRVE ARA+
Sbjct: 154 RMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARAL 213

Query: 157 FDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQM 50
           FD++  R  VV+W  MV+G+ QN +  EALE+F +M
Sbjct: 214 FDQMPVR-NVVSWNVMVTGYAQNGRLNEALELFQRM 248



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
 Frame = -3

Query: 457 VDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVME-EKNVVSWSLMVDGYAR 281
           +DDA K+FD+    D+     +I G  + G +  AR +FD ++ +KNVV+W+ M+ GY R
Sbjct: 51  IDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNVVTWTAMIKGYIR 110

Query: 280 NGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSG 101
              +  A+ LF  MP+RN  SWN+++ GY R+G  + A  +F R+ +R  VV+W  +++ 
Sbjct: 111 LNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER-NVVSWNTIITT 169

Query: 100 HVQNSQYKEALEVFHQMQVAGVV 32
            VQ  +  +A  +F QM+   VV
Sbjct: 170 LVQCGKVDDAQRLFDQMKERDVV 192



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 47/141 (33%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 HPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDA 242
           HP++  CN LI  LC  G ++ AR +FD M ++++  W+ M++GY + G++  A+ LFD 
Sbjct: 32  HPEMKRCNLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDR 91

Query: 241 MPV-RNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALE 65
           +   +N  +W ++I GY+R  +V+ A  +F  +  R  VV+W  MV G+ +N   ++AL+
Sbjct: 92  LDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLR-NVVSWNTMVDGYARNGLTQQALD 150

Query: 64  VFHQMQVAGVVPNKVTIVSIL 2
           +F +M    VV     I +++
Sbjct: 151 LFRRMPERNVVSWNTIITTLV 171



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 38/114 (33%), Positives = 67/114 (58%)
 Frame = -3

Query: 373 SGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGY 194
           S ++   R+   V     +   +L++     +G +D A+ +FD M  R+   W ++I+GY
Sbjct: 17  SSNVTIIRLTSTVSNHPEMKRCNLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGY 76

Query: 193 LRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVV 32
           L+ G +  AR +FDR+  +  VVTWTAM+ G+++ +Q KEA  +F++M +  VV
Sbjct: 77  LKCGMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVV 130


>ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512766|gb|AES94389.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 735

 Score =  139 bits (349), Expect = 1e-30
 Identities = 74/170 (43%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
 Frame = -3

Query: 508 SVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVME 329
           +V+   ++L  YA L  +DDA K+FD     ++VS N +++GL R+GDLE AR +FD   
Sbjct: 133 NVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTP 192

Query: 328 EKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFDR 149
           +KNVVSW+ M++GY  NG +D A+DLFD +  RN  +W S+ISGY R G V  A  +F  
Sbjct: 193 DKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQI 252

Query: 148 IGDRLGVVTWTAMVSGHVQNSQYKEALEVF-HQMQVAGVVPNKVTIVSIL 2
           + ++  VV+WTAM+ G   N  Y+EAL +F   M ++   PN+ T VS++
Sbjct: 253 MPEK-NVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLV 301



 Score =  123 bits (309), Expect = 6e-26
 Identities = 65/160 (40%), Positives = 99/160 (61%)
 Frame = -3

Query: 511 SSVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVM 332
           S V+   S+L  YAK   V+ A  LFD   H ++V+ N ++    +SG    A+  FD M
Sbjct: 70  SRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDM 129

Query: 331 EEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFD 152
            E+NVVSW+ M+ GYA  G +D A+ +FD MP RN  SWNS++ G +R+G +E AR +FD
Sbjct: 130 PERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFD 189

Query: 151 RIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVV 32
              D+  VV+W AM+ G+V+N +  +A ++F Q++   V+
Sbjct: 190 DTPDK-NVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVI 228



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 45/130 (34%), Positives = 76/130 (58%)
 Frame = -3

Query: 421 HPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDA 242
           H  +V    ++    + G +E AR +FD+M  +N+V+++ M+  Y ++G+   A+  FD 
Sbjct: 69  HSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDD 128

Query: 241 MPVRNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEV 62
           MP RN  SW +++SGY   G ++ AR +FD + +R  VV+W +MV G ++N   +EA +V
Sbjct: 129 MPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPER-NVVSWNSMVVGLIRNGDLEEARKV 187

Query: 61  FHQMQVAGVV 32
           F       VV
Sbjct: 188 FDDTPDKNVV 197



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = -3

Query: 370 GDLEAARVIFDV-MEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGY 194
           G +++AR +F+  M+  +  S++ M++GY + G L  AQ+LFD +P+RN+ +W  +ISGY
Sbjct: 346 GLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGY 405

Query: 193 LRHGRVEAARAIFDRIGDR-LGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVP 29
           L  G+V  A  +FD + D     + WT M+ G+VQN    EA+ +F +M   G  P
Sbjct: 406 LSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASP 461


>ref|XP_004301025.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Fragaria vesca subsp. vesca]
          Length = 568

 Score =  138 bits (348), Expect = 2e-30
 Identities = 79/230 (34%), Positives = 127/230 (55%), Gaps = 1/230 (0%)
 Frame = -3

Query: 688 SVTPSLPVPLLAFHRXXXXXXXXXXXXXXXXXLESCRDRHAAEEGRQIHALAVKRGFAAS 509
           S TPSL     A +R                 L SC  R     G ++H   VK GF   
Sbjct: 91  SKTPSLSSHATALYRQMVRVGIRPDNYTYPFVLNSCAARGDVCGGVEVHGRVVKTGFGVC 150

Query: 508 SVLVQRSLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSG-DLEAARVIFDVM 332
            V V  +L+  Y K   + DA K+FD     D+VS N ++    R G  +E A  +F+ M
Sbjct: 151 -VPVSNALIDMYGKCGGLGDARKVFDEMTERDVVSYNAVLGAHARGGAGMEIAAGLFEGM 209

Query: 331 EEKNVVSWSLMVDGYARNGLLDLAQDLFDAMPVRNQFSWNSLISGYLRHGRVEAARAIFD 152
           + +N +SW+ M+ GY  +G +D A+D+FD MP R+  SW +++ GY ++G ++ AR +FD
Sbjct: 210 QGRNAISWNAMIVGYVNSGDVDSARDVFDRMPERDGVSWTTMLVGYTKNGFMDRARGLFD 269

Query: 151 RIGDRLGVVTWTAMVSGHVQNSQYKEALEVFHQMQVAGVVPNKVTIVSIL 2
            + +R  ++ WTAM+SG+ Q+ +  EAL VF +M+ +GV P++ T+ +++
Sbjct: 270 EMRER-SLICWTAMISGYSQSGRASEALSVFRRMEKSGVKPDEFTMTAVI 318


>gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  138 bits (347), Expect = 2e-30
 Identities = 78/198 (39%), Positives = 122/198 (61%), Gaps = 2/198 (1%)
 Frame = -3

Query: 589 ESCRDRHAAEEGRQIHALAVKRGFAASSVLVQRSLLRTYAK--LLSVDDALKLFDRCCHP 416
           ++C  R      + IH    K GF    + V  SL+ TY+K  LL V +A K+F      
Sbjct: 123 KACSGRPWFPVVQMIHTSIEKFGFCLD-IFVPNSLIDTYSKCGLLGVSEAKKMFMLMGER 181

Query: 415 DLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVSWSLMVDGYARNGLLDLAQDLFDAMP 236
           D+VS N +I GL ++G+L  AR +FD M +K+ VSW+ ++DGYA+ G ++ A +LF+ MP
Sbjct: 182 DIVSWNSMIGGLAKTGELGEARRLFDEMPDKDAVSWNTILDGYAKAGQMNEAFELFERMP 241

Query: 235 VRNQFSWNSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEALEVFH 56
            RN  SW++L+SGY + G +  AR +FD++  R  +V WT ++SG+ +    KEA+ ++ 
Sbjct: 242 QRNVVSWSTLVSGYSKAGDMGMARMMFDKMPFR-NLVPWTIIISGYAEKGLAKEAIMLYD 300

Query: 55  QMQVAGVVPNKVTIVSIL 2
           QM+ AG+ P+   I+SIL
Sbjct: 301 QMEEAGLKPDNGAIISIL 318



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 39/202 (19%)
 Frame = -3

Query: 490 SLLRTYAKLLSVDDALKLFDRCCHPDLVSCNDLILGLCRSGDLEAARVIFDVMEEKNVVS 311
           ++L  YAK   +++A +LF+R    ++VS + L+ G  ++GD+  AR++FD M  +N+V 
Sbjct: 219 TILDGYAKAGQMNEAFELFERMPQRNVVSWSTLVSGYSKAGDMGMARMMFDKMPFRNLVP 278

Query: 310 WSLMVDGYARNGLLDLAQDLFDAMPV---------------------------------- 233
           W++++ GYA  GL   A  L+D M                                    
Sbjct: 279 WTIIISGYAEKGLAKEAIMLYDQMEEAGLKPDNGAIISILAACAESGLIGLGRKVHASIE 338

Query: 232 RNQFSW-----NSLISGYLRHGRVEAARAIFDRIGDRLGVVTWTAMVSGHVQNSQYKEAL 68
           R +F       N+L+  Y + G ++ A  +F  I  +  +V+W AM+ G   +    +AL
Sbjct: 339 RTRFKCSTPVSNALLDMYAKCGMLDEASRVFHGIAKK-DLVSWNAMLQGLAMHGHGDKAL 397

Query: 67  EVFHQMQVAGVVPNKVTIVSIL 2
           ++F +M  AG +P+KVT + +L
Sbjct: 398 QLFSRMVKAGFLPDKVTFIGVL 419