BLASTX nr result
ID: Zingiber24_contig00024999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00024999
(218 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004985346.1| PREDICTED: F-box protein SNE-like [Setaria i... 90 3e-16
tpg|DAA43985.1| TPA: F-box protein GID2 [Zea mays] 87 3e-15
ref|NP_001147675.1| F-box protein GID2 [Zea mays] gi|195613018|g... 87 3e-15
gb|ACG27214.1| F-box protein GID2 [Zea mays] 87 3e-15
ref|NP_001049264.1| Os03g0196500 [Oryza sativa Japonica Group] g... 87 3e-15
ref|XP_002465701.1| hypothetical protein SORBIDRAFT_01g044060 [S... 85 1e-14
gb|ACN33386.1| unknown [Zea mays] gi|413956711|gb|AFW89360.1| F-... 84 3e-14
ref|NP_001150591.1| F-box protein GID2 [Zea mays] gi|195640404|g... 84 3e-14
ref|XP_003561948.1| PREDICTED: F-box protein SNE-like [Brachypod... 79 8e-13
ref|XP_006469747.1| PREDICTED: F-box protein SNE-like, partial [... 77 2e-12
ref|XP_006447769.1| hypothetical protein CICLE_v10016961mg [Citr... 77 2e-12
ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis s... 77 2e-12
gb|EMJ16301.1| hypothetical protein PRUPE_ppa012743mg [Prunus pe... 75 9e-12
gb|EXB98294.1| hypothetical protein L484_014280 [Morus notabilis] 74 3e-11
ref|XP_006362999.1| PREDICTED: F-box protein SNE-like [Solanum t... 74 3e-11
ref|XP_004243874.1| PREDICTED: F-box protein SNE-like [Solanum l... 74 3e-11
ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi... 73 3e-11
ref|XP_002321191.1| hypothetical protein POPTR_0014s16360g [Popu... 73 4e-11
emb|CBI28427.3| unnamed protein product [Vitis vinifera] 72 6e-11
ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera... 72 6e-11
>ref|XP_004985346.1| PREDICTED: F-box protein SNE-like [Setaria italica]
Length = 199
Score = 89.7 bits (221), Expect = 3e-16
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
INDNADLLAEILGRLDGRSLA A CVCRLW A+ARR+AVWE +C RHV A +A
Sbjct: 43 INDNADLLAEILGRLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAA 97
>tpg|DAA43985.1| TPA: F-box protein GID2 [Zea mays]
Length = 178
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
INDNAD+LAEIL RLDGRSLA A CVCRLW A+ARR+AVWE +C RHV A +A
Sbjct: 27 INDNADILAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAA 81
>ref|NP_001147675.1| F-box protein GID2 [Zea mays] gi|195613018|gb|ACG28339.1| F-box
protein GID2 [Zea mays]
Length = 182
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
INDNAD+LAEIL RLDGRSLA A CVCRLW A+ARR+AVWE +C RHV A +A
Sbjct: 31 INDNADILAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAA 85
>gb|ACG27214.1| F-box protein GID2 [Zea mays]
Length = 184
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
INDNAD+LAEIL RLDGRSLA A CVCRLW A+ARR+AVWE +C RHV A +A
Sbjct: 32 INDNADILAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAA 86
>ref|NP_001049264.1| Os03g0196500 [Oryza sativa Japonica Group]
gi|108706661|gb|ABF94456.1| F-box domain containing
protein [Oryza sativa Japonica Group]
gi|113547735|dbj|BAF11178.1| Os03g0196500 [Oryza sativa
Japonica Group] gi|125542761|gb|EAY88900.1| hypothetical
protein OsI_10379 [Oryza sativa Indica Group]
Length = 178
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASA 205
INDNADLLAEIL RLDGRSLA A CVCRLW A+ARR+AVWE +C RHV A
Sbjct: 34 INDNADLLAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPA 84
>ref|XP_002465701.1| hypothetical protein SORBIDRAFT_01g044060 [Sorghum bicolor]
gi|241919555|gb|EER92699.1| hypothetical protein
SORBIDRAFT_01g044060 [Sorghum bicolor]
Length = 203
Score = 84.7 bits (208), Expect = 1e-14
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHV 196
INDNAD+LAEIL RLDGRSLA A CVCRLW A+ARR+AVWE +C RHV
Sbjct: 52 INDNADILAEILSRLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHV 99
>gb|ACN33386.1| unknown [Zea mays] gi|413956711|gb|AFW89360.1| F-box protein GID2
[Zea mays]
Length = 180
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
INDNADLLAEIL RLDGRSLA A VCRLW A+ARR+AVWE +C RHV A ++A
Sbjct: 27 INDNADLLAEILARLDGRSLAAAAGVCRLWAAVARRDAVWEALCLRHVGPAPSAA 81
>ref|NP_001150591.1| F-box protein GID2 [Zea mays] gi|195640404|gb|ACG39670.1| F-box
protein GID2 [Zea mays]
Length = 180
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
INDNADLLAEIL RLDGRSLA A VCRLW A+ARR+AVWE +C RHV A ++A
Sbjct: 27 INDNADLLAEILARLDGRSLAAAAGVCRLWAAVARRDAVWEALCLRHVGPAPSAA 81
>ref|XP_003561948.1| PREDICTED: F-box protein SNE-like [Brachypodium distachyon]
Length = 176
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGAS 214
INDNAD+L+EIL RLDGRSLA A VCRLW A++RR+AVWE +C RHV S
Sbjct: 35 INDNADILSEILSRLDGRSLAAAAGVCRLWAAVSRRDAVWEALCLRHVGPTARS 88
>ref|XP_006469747.1| PREDICTED: F-box protein SNE-like, partial [Citrus sinensis]
Length = 115
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
IND+ D+L EIL RLDGRSL VA CVCRLW LAR +++WE +C+RHV+S S+
Sbjct: 24 INDDIDILIEILKRLDGRSLCVAACVCRLWRTLARNDSLWEELCFRHVSSPPPSS 78
>ref|XP_006447769.1| hypothetical protein CICLE_v10016961mg [Citrus clementina]
gi|568830423|ref|XP_006469499.1| PREDICTED: F-box
protein SNE-like [Citrus sinensis]
gi|557550380|gb|ESR61009.1| hypothetical protein
CICLE_v10016961mg [Citrus clementina]
Length = 170
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
IND+ D+L EIL RLDGRSL VA CVCRLW LAR +++WE +C+RHV+S S+
Sbjct: 24 INDDIDILIEILKRLDGRSLCVAACVCRLWRTLARNDSLWEELCFRHVSSPPPSS 78
>ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis sativus]
gi|449532669|ref|XP_004173303.1| PREDICTED: F-box
protein SNE-like [Cucumis sativus]
Length = 152
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +2
Query: 41 RRIPINDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVAS 202
R+ INDN D+L EIL RLDG SL VA CVCRLW +AR E+VWE VC+RHV S
Sbjct: 14 RKFLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFRHVKS 67
>gb|EMJ16301.1| hypothetical protein PRUPE_ppa012743mg [Prunus persica]
Length = 156
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGASA 217
IND+ D+L EIL RLDG SL VA CVCRLW+ LAR +++WE +C+RHV+S S+
Sbjct: 20 INDHIDILVEILKRLDGPSLGVAACVCRLWSTLARNDSLWEHLCFRHVSSPPPSS 74
>gb|EXB98294.1| hypothetical protein L484_014280 [Morus notabilis]
Length = 153
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVAS 202
INDN D+L EIL RLDG SL +A CVCRLW+A+AR +++WE +C+R V+S
Sbjct: 18 INDNIDILIEILKRLDGASLGIAACVCRLWSAVARNDSLWEHLCFRQVSS 67
>ref|XP_006362999.1| PREDICTED: F-box protein SNE-like [Solanum tuberosum]
Length = 164
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVA 199
INDN D+L EIL RLDGRSL VA CVC+LW +AR +++WE +C+RHV+
Sbjct: 7 INDNEDVLIEILKRLDGRSLGVAACVCKLWCGIARNDSLWEHLCFRHVS 55
>ref|XP_004243874.1| PREDICTED: F-box protein SNE-like [Solanum lycopersicum]
Length = 151
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVA 199
INDN D+L EIL RLDGRSL VA CVC+LW +AR +++WE +C+RHV+
Sbjct: 7 INDNEDVLIEILKRLDGRSLGVAACVCKLWCGIARNDSLWEHLCFRHVS 55
>ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis]
gi|223530272|gb|EEF32172.1| F-box protein SNE, putative
[Ricinus communis]
Length = 155
Score = 73.2 bits (178), Expect = 3e-11
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 44 RIPINDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVAS 202
+ IND+ D+L EIL RLDGRSL VA CVC LW +AR +++WE +C+RHV S
Sbjct: 12 KFSINDHVDILVEILKRLDGRSLGVAACVCNLWCTIARNDSLWENLCFRHVIS 64
>ref|XP_002321191.1| hypothetical protein POPTR_0014s16360g [Populus trichocarpa]
gi|222861964|gb|EEE99506.1| hypothetical protein
POPTR_0014s16360g [Populus trichocarpa]
Length = 153
Score = 72.8 bits (177), Expect = 4e-11
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +2
Query: 53 INDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVASAGAS 214
IND+ D+L EIL RLDGRSL V+ CVCRLW +AR +++WE +C+RHV+ +S
Sbjct: 14 INDHVDILLEILKRLDGRSLCVSACVCRLWCTIARNDSLWEHLCFRHVSPPPSS 67
>emb|CBI28427.3| unnamed protein product [Vitis vinifera]
Length = 1221
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +2
Query: 44 RIPINDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVA 199
R INDN D+L EIL RLDGRSL VA CVCRLW ++ +++WE +C+RHV+
Sbjct: 1106 RFFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFRHVS 1157
>ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera]
gi|147772267|emb|CAN67350.1| hypothetical protein
VITISV_018090 [Vitis vinifera]
Length = 170
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +2
Query: 44 RIPINDNADLLAEILGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHVA 199
R INDN D+L EIL RLDGRSL VA CVCRLW ++ +++WE +C+RHV+
Sbjct: 24 RFFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFRHVS 75