BLASTX nr result
ID: Zingiber24_contig00024922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00024922
(826 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK46964.1| unknown [Lotus japonicus] 139 1e-30
ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycin... 135 1e-29
ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 135 2e-29
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera] 134 3e-29
ref|XP_006452238.1| hypothetical protein CICLE_v10009689mg [Citr... 134 5e-29
ref|XP_002522996.1| conserved hypothetical protein [Ricinus comm... 133 9e-29
ref|NP_001144531.1| hypothetical protein [Zea mays] gi|195643508... 132 1e-28
ref|NP_001238318.1| uncharacterized protein LOC100499940 [Glycin... 132 2e-28
gb|ESW18409.1| hypothetical protein PHAVU_006G038600g [Phaseolus... 131 3e-28
ref|XP_004493199.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 130 6e-28
ref|XP_004957877.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 130 7e-28
ref|XP_006406371.1| hypothetical protein EUTSA_v10021639mg [Eutr... 129 1e-27
ref|XP_006858083.1| hypothetical protein AMTR_s00062p00076280 [A... 128 2e-27
ref|XP_006352499.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 128 3e-27
gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus pe... 128 3e-27
sp|A2YLX7.1|LTD_ORYSI RecName: Full=Protein LHCP TRANSLOCATION D... 127 4e-27
ref|XP_004294361.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 127 5e-27
gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana] 127 5e-27
ref|XP_004152919.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT... 127 6e-27
ref|NP_564580.1| protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidop... 126 8e-27
>gb|AFK46964.1| unknown [Lotus japonicus]
Length = 175
Score = 139 bits (350), Expect = 1e-30
Identities = 86/175 (49%), Positives = 111/175 (63%), Gaps = 15/175 (8%)
Frame = -2
Query: 582 ASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEG---GSSAFF 412
+SI C + + S + P+ SS NL+S F +RRR+ C ++T G GS A
Sbjct: 3 SSIACITHQPITSRLNSLPSPVSS-LNLASGFLGIRRRVGCL--RLTSSIGPSNGSKATC 59
Query: 411 WLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPV 268
W R V A G +RDDFDRDDV QYF +M M + ++ALL+ +HPV
Sbjct: 60 WFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIHPV 119
Query: 267 DILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
DILL+LAAS GD+PKIEEL+RAGA+YDVRD DGRTALDRA ND++K+ IL +SV
Sbjct: 120 DILLLLAASEGDMPKIEELLRAGAKYDVRDGDGRTALDRA--NDEVKDFILNFSV 172
>ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycine max]
gi|255630625|gb|ACU15672.1| unknown [Glycine max]
Length = 181
Score = 135 bits (341), Expect = 1e-29
Identities = 87/182 (47%), Positives = 113/182 (62%), Gaps = 21/182 (11%)
Frame = -2
Query: 585 MASIPCSFYYQVP------SSVTFP-PAASSSDENLSSPFDVLRRRLCCFG--AKVTPDE 433
MASIPC ++ P ++ FP P S+S NL+S F RRR+ +++
Sbjct: 1 MASIPCITHHHHPITSNPNNNNAFPSPHVSAS--NLASRFLGTRRRVGSHSLTSRIIGPS 58
Query: 432 GGSSAFFWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALL 289
GS + W R V A G RDDFDRDDV QYF +M M + ++ALL
Sbjct: 59 NGSKSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLTVEGTYDKMEALL 118
Query: 288 NLDVHPVDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGY 109
+ ++HPVDILL+LAAS GD PKIEEL+RAGA+YDV+DADGRTALDRA+ D+IK+ IL +
Sbjct: 119 SQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAA--DEIKDFILNF 176
Query: 108 SV 103
SV
Sbjct: 177 SV 178
>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
gi|297735982|emb|CBI23956.3| unnamed protein product
[Vitis vinifera]
Length = 172
Score = 135 bits (339), Expect = 2e-29
Identities = 83/172 (48%), Positives = 105/172 (61%), Gaps = 12/172 (6%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEGGSSAFFWL 406
MASIPC+ + S P + S+ +S + R+L GS A W
Sbjct: 1 MASIPCTTHLLFTSK---PQISPSNPPIFTSQLLGIPRKLSWSTPTRLGPSNGSRATCWF 57
Query: 405 RLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDI 262
R NR V A G TRDDFDRDDV QYF +M M + ++ALL+ ++HPVDI
Sbjct: 58 RFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDI 117
Query: 261 LLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYS 106
LLM+AAS GD PKIEEL+RAGA Y V+DADGRTAL+RA+ ND+IK+LIL +S
Sbjct: 118 LLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAA-NDEIKDLILNFS 168
>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
Length = 172
Score = 134 bits (338), Expect = 3e-29
Identities = 83/172 (48%), Positives = 105/172 (61%), Gaps = 12/172 (6%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEGGSSAFFWL 406
MASIPC+ + S P + S+ +S + R+L GS A W
Sbjct: 1 MASIPCTTHLLFTSK---PQISPSNPPIFTSQXLGIPRKLSWSTPTRLGPSNGSRATCWF 57
Query: 405 RLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDI 262
R NR V A G TRDDFDRDDV QYF +M M + ++ALL+ ++HPVDI
Sbjct: 58 RFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDI 117
Query: 261 LLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYS 106
LLM+AAS GD PKIEEL+RAGA Y V+DADGRTAL+RA+ ND+IK+LIL +S
Sbjct: 118 LLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAA-NDEIKDLILNFS 168
>ref|XP_006452238.1| hypothetical protein CICLE_v10009689mg [Citrus clementina]
gi|568882260|ref|XP_006493957.1| PREDICTED: protein LHCP
TRANSLOCATION DEFECT-like [Citrus sinensis]
gi|557555464|gb|ESR65478.1| hypothetical protein
CICLE_v10009689mg [Citrus clementina]
Length = 173
Score = 134 bits (336), Expect = 5e-29
Identities = 84/176 (47%), Positives = 105/176 (59%), Gaps = 15/176 (8%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTF---PPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEGGSSAF 415
MASIPC + +S+ F P + SS SS F + L CF GS A
Sbjct: 1 MASIPC-----ITASIHFVSKPSNSQSSCTKFSSQFLGTKNNLKCFRPSRIGPSNGSRAQ 55
Query: 414 FWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHP 271
W + V A G RDDFDRDDV QYF +M M + ++ALL+ ++HP
Sbjct: 56 CWFKFGKNGVDAENAGIYGSQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP 115
Query: 270 VDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
VDILLMLAAS GD PKIEEL+RAGA Y V+DADGRTAL+RA +++IK+LIL +SV
Sbjct: 116 VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERA-PSEEIKDLILNFSV 170
>ref|XP_002522996.1| conserved hypothetical protein [Ricinus communis]
gi|223537808|gb|EEF39426.1| conserved hypothetical
protein [Ricinus communis]
Length = 175
Score = 133 bits (334), Expect = 9e-29
Identities = 81/174 (46%), Positives = 105/174 (60%), Gaps = 13/174 (7%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSD-ENLSSPFDVLRRRLCCFGAKVTPDEGGSSAFFW 409
MASIP S +T P +++ N S+PF + ++C GS W
Sbjct: 1 MASIPSSSCTAHTLPITCKPQKTATFLPNFSTPFLGTKSKVCLVRPCRIGPSNGSRVKCW 60
Query: 408 LRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVD 265
+ V A G +RDDFDRDDV QYF +M M + ++ALL+ D+HPVD
Sbjct: 61 FKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHPVD 120
Query: 264 ILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
ILLMLAAS GD PKIEEL+RAGA Y+V+DADGRTALDRA N++I+E I+G+SV
Sbjct: 121 ILLMLAASEGDKPKIEELLRAGASYNVKDADGRTALDRA--NEEIREFIVGFSV 172
>ref|NP_001144531.1| hypothetical protein [Zea mays] gi|195643508|gb|ACG41222.1|
hypothetical protein [Zea mays]
gi|223946937|gb|ACN27552.1| unknown [Zea mays]
gi|414886920|tpg|DAA62934.1| TPA: hypothetical protein
ZEAMMB73_311368 [Zea mays]
Length = 186
Score = 132 bits (332), Expect = 1e-28
Identities = 81/184 (44%), Positives = 104/184 (56%), Gaps = 24/184 (13%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFG------------AKVT 442
MASIPC+F +S P ++ VLR L G ++V
Sbjct: 1 MASIPCTFQLSTAASRRVSPRVAAQGRGQGGGGAVLRTPLLGAGRRGLGWLRPSRLSRVV 60
Query: 441 P--DEGGSSAFFWLRLRNRVVTA----GPMTRDDFDRDDVRQYFTHMRMA------ENIQ 298
P + G + W + N+ G RDDFDRDDV QYF +M M + ++
Sbjct: 61 PASESGRAGPTCWFKFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKME 120
Query: 297 ALLNLDVHPVDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELI 118
ALLN D+HPVDILLMLAAS GD PKIEEL+RAGAR+DV+D DGRTALDRA+ D+ +E I
Sbjct: 121 ALLNQDIHPVDILLMLAASEGDRPKIEELLRAGARFDVKDVDGRTALDRAT--DETREFI 178
Query: 117 LGYS 106
LG++
Sbjct: 179 LGFA 182
>ref|NP_001238318.1| uncharacterized protein LOC100499940 [Glycine max]
gi|255627865|gb|ACU14277.1| unknown [Glycine max]
Length = 177
Score = 132 bits (331), Expect = 2e-28
Identities = 84/178 (47%), Positives = 109/178 (61%), Gaps = 17/178 (9%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVT---FPPAASSSDENLSSPFDVLRRR--LCCFGAKVTPDEGGSS 421
MASI C ++ + S + P S+S NL+S F R+R L +++ GS
Sbjct: 1 MASISCITHHPITSKLNNAFSSPHVSAS--NLASRFLGTRKRVGLHSLTSRIIGPSNGSK 58
Query: 420 AFFWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDV 277
A W R V A G RDDFDRDDV QYF +M M + ++ALL+ ++
Sbjct: 59 ATCWFRFGKNGVDAKGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNI 118
Query: 276 HPVDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
HPVDILL+LAAS D PKIEEL+RAGA+YDV+DADGRTALDRA+ D+IK+ IL +SV
Sbjct: 119 HPVDILLLLAASESDKPKIEELLRAGAKYDVKDADGRTALDRAT--DEIKDFILNFSV 174
>gb|ESW18409.1| hypothetical protein PHAVU_006G038600g [Phaseolus vulgaris]
Length = 172
Score = 131 bits (329), Expect = 3e-28
Identities = 83/181 (45%), Positives = 104/181 (57%), Gaps = 20/181 (11%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRL--------CCFGAKVTPDEG 430
MASIPC +T PP S + L SP R L +++ P G
Sbjct: 1 MASIPC---------ITHPPITSKLNNFLPSPHVSASRFLGTQKSVGWLSLTSRIGPSNG 51
Query: 429 GSSAFFWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLN 286
S A W R V A G RDDFDRDDV QYF +M M + ++ALL+
Sbjct: 52 -SKATCWFRFGKNGVDAQGAGIYGSQARDDFDRDDVEQYFNYMGMLAVDGTYDRMEALLS 110
Query: 285 LDVHPVDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYS 106
L +HPVDILL+LAAS GD PKIEEL++AGA+YDV+D +GRTALDRA N++IK+ IL +S
Sbjct: 111 LKIHPVDILLLLAASEGDKPKIEELLKAGAKYDVKDGEGRTALDRA--NEEIKDFILNFS 168
Query: 105 V 103
V
Sbjct: 169 V 169
>ref|XP_004493199.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cicer arietinum]
Length = 177
Score = 130 bits (327), Expect = 6e-28
Identities = 81/176 (46%), Positives = 106/176 (60%), Gaps = 15/176 (8%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFGA---KVTPDEGGSSAF 415
MASI C+ +Q S + SSS SS F +R+R + + ++ GS
Sbjct: 1 MASITCTTTHQPIISNSSKSQISSSSNLSSSRFLGIRKRSVGWSSLTSRINGPSNGSRFT 60
Query: 414 FWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHP 271
W + V A G TR+DFDRDDV QYF +M M + ++ALL ++HP
Sbjct: 61 CWFKFGKNGVDAEGAGIYGSQTRNDFDRDDVEQYFNYMGMLAVEGTYDKMEALLGQNIHP 120
Query: 270 VDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
VDILL+LAAS D PKIEEL+RAGA+YDV+DADG+TALDRA ND+IK+ IL +SV
Sbjct: 121 VDILLLLAASESDKPKIEELLRAGAKYDVKDADGKTALDRA--NDEIKDFILNFSV 174
>ref|XP_004957877.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Setaria italica]
Length = 186
Score = 130 bits (326), Expect = 7e-28
Identities = 84/184 (45%), Positives = 107/184 (58%), Gaps = 24/184 (13%)
Frame = -2
Query: 585 MASIPCSFYYQVPSS-----VTFPPAASSSDENLSSPF---DVLRRRLCCFG----AKVT 442
MASIPC+F ++ V+ AA + + L +P RR L ++V
Sbjct: 1 MASIPCTFQLSARTAAASRRVSPRAAAQAQGQGLRTPLLGSGAARRGLGWLRPSRLSRVV 60
Query: 441 P--DEGGSSAFFWLRLRNRVVTA----GPMTRDDFDRDDVRQYFTHMRMA------ENIQ 298
P + G W R N+ G RDDFDRDDV QYF +M M + ++
Sbjct: 61 PASESGRVGPTCWFRFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKME 120
Query: 297 ALLNLDVHPVDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELI 118
ALLN D+HPVDILLMLAAS GD PKIEEL+RAGA+YDV+D DGRTALDRAS D+ +E I
Sbjct: 121 ALLNQDIHPVDILLMLAASEGDRPKIEELLRAGAKYDVKDVDGRTALDRAS--DETREFI 178
Query: 117 LGYS 106
LG++
Sbjct: 179 LGFA 182
>ref|XP_006406371.1| hypothetical protein EUTSA_v10021639mg [Eutrema salsugineum]
gi|557107517|gb|ESQ47824.1| hypothetical protein
EUTSA_v10021639mg [Eutrema salsugineum]
Length = 174
Score = 129 bits (325), Expect = 1e-27
Identities = 83/170 (48%), Positives = 102/170 (60%), Gaps = 12/170 (7%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEGGSSAFFWL 406
MASI C+ T P SSS LS L R+ ++ P G S A W
Sbjct: 1 MASISCTTPSTSLFCSTTKPINSSSSSQLSLSSRFLGTRVVKLRIRLGPSYG-SRATCWF 59
Query: 405 RLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDI 262
+ V A G +RDDFDRDDV QYF +M M + ++ALLN ++HPVDI
Sbjct: 60 KFGKNGVDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQNIHPVDI 119
Query: 261 LLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILG 112
LLMLAAS GD PKIEEL+RAGA Y V+DADGRTALDRAS +++I++LILG
Sbjct: 120 LLMLAASEGDKPKIEELLRAGADYTVKDADGRTALDRAS-SEEIRDLILG 168
>ref|XP_006858083.1| hypothetical protein AMTR_s00062p00076280 [Amborella trichopoda]
gi|548862186|gb|ERN19550.1| hypothetical protein
AMTR_s00062p00076280 [Amborella trichopoda]
Length = 192
Score = 128 bits (322), Expect = 2e-27
Identities = 77/159 (48%), Positives = 100/159 (62%), Gaps = 16/159 (10%)
Frame = -2
Query: 531 PPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEG----GSSAFFWLRLRNRVVTA----- 379
PP + LSSPF ++ K+T + G GS A W + V A
Sbjct: 32 PPTTTFRAIRLSSPFLGFKKLGYFQANKITVNLGARSNGSRATCWFKFGKNGVDAEGAGI 91
Query: 378 -GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDILLMLAASNGDVPKI 220
G RDDFDRDDV QYF +M M + ++ALL+LD+HPVDILLMLA+S GD PKI
Sbjct: 92 YGSQKRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLSLDIHPVDILLMLASSEGDKPKI 151
Query: 219 EELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
EEL++AGA Y+V+D DGRTALDRA+ +D+I++LI G+SV
Sbjct: 152 EELLKAGANYNVKDMDGRTALDRAA-SDEIRQLIQGFSV 189
>ref|XP_006352499.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Solanum
tuberosum]
Length = 172
Score = 128 bits (321), Expect = 3e-27
Identities = 79/171 (46%), Positives = 107/171 (62%), Gaps = 12/171 (7%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPF---DVLRRRLCCFGAKVTPDEGGSSAF 415
MASIPC+ + SS P +SS L+S F L+ C + + P+ GS
Sbjct: 1 MASIPCTLHLTFSSSR--PNFSSSCSVKLNSCFMGVSKLKSIGWCRPSGLGPN-CGSRTT 57
Query: 414 FWLRLRNRVVTAG---PMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDI 262
W R TAG +RDDFDRDDV QYF +M M + ++ALL+ ++HPVDI
Sbjct: 58 CWFNFRQNAETAGVYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDI 117
Query: 261 LLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGY 109
LL++A++ GD+PKIEEL+RAGA Y V+DADGRTALDRA+ ND++K+ I+ Y
Sbjct: 118 LLLMASTEGDLPKIEELLRAGADYTVKDADGRTALDRAA-NDEVKDFIVNY 167
>gb|EMJ13355.1| hypothetical protein PRUPE_ppa012342mg [Prunus persica]
Length = 173
Score = 128 bits (321), Expect = 3e-27
Identities = 79/173 (45%), Positives = 103/173 (59%), Gaps = 12/173 (6%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRRRLCCFGAKVTPDEGGSSAFFWL 406
MASIPC+ +++T SS+ N + F R RL GS A W
Sbjct: 1 MASIPCTGVAAAAAAITSKSFPSSTKFN--TRFVGTRNRLGWVRPLGLGPSNGSRAKCWF 58
Query: 405 RLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDI 262
+ V A G +RDDFDRDDV QYF +M M + + ALL+ ++HPVDI
Sbjct: 59 KFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMNALLSQNIHPVDI 118
Query: 261 LLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
LL++AAS GD PKIEEL+RAGA Y ++D DGRTALDRA+ +D+IK+ ILG+SV
Sbjct: 119 LLLMAASEGDKPKIEELLRAGASYSIKDVDGRTALDRAA-SDEIKDFILGFSV 170
>sp|A2YLX7.1|LTD_ORYSI RecName: Full=Protein LHCP TRANSLOCATION DEFECT; Flags: Precursor
gi|353558691|sp|A3BKF2.1|LTD_ORYSJ RecName: Full=Protein
LHCP TRANSLOCATION DEFECT; Flags: Precursor
gi|125558552|gb|EAZ04088.1| hypothetical protein
OsI_26226 [Oryza sativa Indica Group]
gi|125600465|gb|EAZ40041.1| hypothetical protein
OsJ_24479 [Oryza sativa Japonica Group]
Length = 172
Score = 127 bits (320), Expect = 4e-27
Identities = 78/169 (46%), Positives = 99/169 (58%), Gaps = 9/169 (5%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLR-RRLCCFGAKVTPDEGGSSAFFW 409
MASIPC+F +S AA+ ++ LR RL G + FF
Sbjct: 1 MASIPCTFQLSARASSASAAAAARRSPRAAARLGWLRPSRLSAVVPASESGRVGPTCFFK 60
Query: 408 LRLRNRVVTA--GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDILLM 253
++ G RDDFDRDDV QYF +M M + ++ALLN D+HPVDILLM
Sbjct: 61 FGNKDAEGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLNQDIHPVDILLM 120
Query: 252 LAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYS 106
LAAS GD PK+EEL+RAGA+YDV+D DGRTALDRA+ D +E ILG++
Sbjct: 121 LAASEGDKPKLEELLRAGAKYDVKDVDGRTALDRAA--DDTREFILGFA 167
>ref|XP_004294361.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Fragaria vesca
subsp. vesca]
Length = 175
Score = 127 bits (319), Expect = 5e-27
Identities = 81/176 (46%), Positives = 106/176 (60%), Gaps = 15/176 (8%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDEN---LSSPFDVLRRRLCCFGAKVTPDEGGSSAF 415
MASIPC+ P+ F + +S + L++ F R RL GS A
Sbjct: 1 MASIPCT---TAPTHSCFASNSFNSPTSSVKLNTRFLGTRNRLGWVRPFGLGPSNGSRAK 57
Query: 414 FWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHP 271
W + V A G +RDDFD+DDV QYF +M M + + ALL+ ++HP
Sbjct: 58 CWFKFGKNGVDAEGAGIYGSQSRDDFDKDDVEQYFNYMGMLAVEGTYDKMNALLSQNIHP 117
Query: 270 VDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYSV 103
VDILL++AAS GD PKIEEL+RAGA Y+V+DADGRTALDRA+ ND+IK+ ILG+SV
Sbjct: 118 VDILLLMAASEGDKPKIEELLRAGASYNVKDADGRTALDRAA-NDEIKDFILGFSV 172
>gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana]
Length = 257
Score = 127 bits (319), Expect = 5e-27
Identities = 83/184 (45%), Positives = 111/184 (60%), Gaps = 13/184 (7%)
Frame = -2
Query: 618 EKIDRGRQ*SFMASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRR-RLCCFGAKVT 442
E+++ + + MAS SF + + SSS LSS F R +L A++
Sbjct: 72 ERVETTIKRTAMASSSISFSCAPSLATSLFSTTSSSPRLLSSRFLGTRNLKLRIRPARLG 131
Query: 441 PDEGGSSAFFWLRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQ 298
P G S W + V A G +RDDFDRDDV QYF +M M ++
Sbjct: 132 PSNG-SRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYSKME 190
Query: 297 ALLNLDVHPVDILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELI 118
ALLNL++HPVDILLMLAA+ GD PKIEEL++AGA Y V+DADGRTA+DRA+ +++I++LI
Sbjct: 191 ALLNLNIHPVDILLMLAATEGDRPKIEELLKAGADYSVKDADGRTAIDRAN-SEEIRDLI 249
Query: 117 LGYS 106
LGYS
Sbjct: 250 LGYS 253
>ref|XP_004152919.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT-like [Cucumis sativus]
gi|449513487|ref|XP_004164338.1| PREDICTED: protein LHCP
TRANSLOCATION DEFECT-like [Cucumis sativus]
Length = 168
Score = 127 bits (318), Expect = 6e-27
Identities = 79/171 (46%), Positives = 101/171 (59%), Gaps = 11/171 (6%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDE--NLSSPFDVLRRRLCCFGAKVTPDEGGSSAFF 412
MAS+ C+ SS+ P + +S L S F L+ L GS A
Sbjct: 1 MASLSCT------SSINLTPRSFNSRPPFKLGSHFLGLQSNLRWLSPVSIGPSNGSRATC 54
Query: 411 WLRLRNRVVTAG---PMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVDIL 259
W LR AG +RDDF+RDDV QYF +M M + ++ALL+ D+HPVDIL
Sbjct: 55 WFNLRQNAEGAGIYGSQSRDDFNRDDVEQYFNYMGMLAVEGTYDKMEALLSQDIHPVDIL 114
Query: 258 LMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYS 106
LMLAAS GD PK+EEL+RAGA YDV+D DGRTA+DRA N++IK+ IL +S
Sbjct: 115 LMLAASEGDKPKLEELLRAGASYDVKDVDGRTAVDRA-VNEEIKDFILNFS 164
>ref|NP_564580.1| protein GRANA DEFICIENT CHLOROPLAST 1 [Arabidopsis thaliana]
gi|75248476|sp|Q8VY88.1|LTD_ARATH RecName: Full=Protein
LHCP TRANSLOCATION DEFECT; AltName: Full=Protein
GRANA-DEFICIENT CHLOROPLAST 1; Flags: Precursor
gi|18252245|gb|AAL61955.1| unknown protein [Arabidopsis
thaliana] gi|21386977|gb|AAM47892.1| unknown protein
[Arabidopsis thaliana] gi|21553984|gb|AAM63065.1|
unknown [Arabidopsis thaliana]
gi|332194478|gb|AEE32599.1| Ankyrin repeat family
protein [Arabidopsis thaliana]
Length = 175
Score = 126 bits (317), Expect = 8e-27
Identities = 82/173 (47%), Positives = 105/173 (60%), Gaps = 13/173 (7%)
Frame = -2
Query: 585 MASIPCSFYYQVPSSVTFPPAASSSDENLSSPFDVLRR-RLCCFGAKVTPDEGGSSAFFW 409
MAS SF + + SSS LSS F R +L A++ P G S W
Sbjct: 1 MASSSISFSCAPSLATSLFSTTSSSPRLLSSRFLGTRNLKLRIRPARLGPSNG-SRTTCW 59
Query: 408 LRLRNRVVTA------GPMTRDDFDRDDVRQYFTHMRMA------ENIQALLNLDVHPVD 265
+ V A G +RDDFDRDDV QYF +M M ++ALLNL++HPVD
Sbjct: 60 FKFGKNGVDAENAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYSKMEALLNLNIHPVD 119
Query: 264 ILLMLAASNGDVPKIEELMRAGARYDVRDADGRTALDRASTNDQIKELILGYS 106
ILLMLAA+ GD PKIEEL++AGA Y V+DADGRTA+DRA+ +++I++LILGYS
Sbjct: 120 ILLMLAATEGDRPKIEELLKAGADYSVKDADGRTAIDRAN-SEEIRDLILGYS 171