BLASTX nr result

ID: Zingiber24_contig00024845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024845
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006494495.1| PREDICTED: polyadenylate-binding protein 4 [...    73   4e-11
ref|XP_006425948.1| hypothetical protein CICLE_v10025109mg [Citr...    73   4e-11
ref|XP_006425947.1| hypothetical protein CICLE_v10025109mg [Citr...    73   4e-11
ref|XP_006422975.1| hypothetical protein CICLE_v10027999mg [Citr...    73   4e-11
ref|NP_001275799.1| poly A-binding protein 2 [Citrus sinensis] g...    73   4e-11
ref|XP_002301171.2| hypothetical protein POPTR_0002s12570g [Popu...    71   1e-10
gb|EMJ02396.1| hypothetical protein PRUPE_ppa002607mg [Prunus pe...    70   2e-10
gb|EOY14403.1| Poly(A) binding protein 8 isoform 1 [Theobroma ca...    70   3e-10
gb|EXB54169.1| Polyadenylate-binding protein 2 [Morus notabilis]       70   4e-10
ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [...    70   4e-10
emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]         69   5e-10
gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japo...    69   5e-10
gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indi...    69   5e-10
ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group] g...    69   5e-10
gb|EMS47633.1| Polyadenylate-binding protein 2 [Triticum urartu]       69   6e-10
ref|XP_004304018.1| PREDICTED: polyadenylate-binding protein 2-l...    69   6e-10
ref|XP_004978120.1| PREDICTED: polyadenylate-binding protein 2-l...    69   8e-10
gb|EXC17307.1| Polyadenylate-binding protein 2 [Morus notabilis]       68   1e-09
ref|XP_006473293.1| PREDICTED: polyadenylate-binding protein 8-l...    68   1e-09
gb|ESW25573.1| hypothetical protein PHAVU_003G0475001g, partial ...    68   1e-09

>ref|XP_006494495.1| PREDICTED: polyadenylate-binding protein 4 [Citrus sinensis]
          Length = 663

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQP-PVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA      P P DR+A+LSL  N+VS
Sbjct: 608 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLNDNIVS 663


>ref|XP_006425948.1| hypothetical protein CICLE_v10025109mg [Citrus clementina]
           gi|557527938|gb|ESR39188.1| hypothetical protein
           CICLE_v10025109mg [Citrus clementina]
          Length = 652

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQP-PVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA      P P DR+A+LSL  N+VS
Sbjct: 597 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLNDNIVS 652


>ref|XP_006425947.1| hypothetical protein CICLE_v10025109mg [Citrus clementina]
           gi|557527937|gb|ESR39187.1| hypothetical protein
           CICLE_v10025109mg [Citrus clementina]
          Length = 650

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQP-PVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA      P P DR+A+LSL  N+VS
Sbjct: 595 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLNDNIVS 650


>ref|XP_006422975.1| hypothetical protein CICLE_v10027999mg [Citrus clementina]
           gi|568867419|ref|XP_006487035.1| PREDICTED:
           polyadenylate-binding protein 2-like [Citrus sinensis]
           gi|557524909|gb|ESR36215.1| hypothetical protein
           CICLE_v10027999mg [Citrus clementina]
          Length = 645

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 41/55 (74%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA       P D+LA+LSL  N+VS
Sbjct: 591 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQQAGNPADQLASLSLNDNLVS 645


>ref|NP_001275799.1| poly A-binding protein 2 [Citrus sinensis]
           gi|359386152|gb|AEV43365.1| poly A-binding protein 2
           [Citrus sinensis]
          Length = 652

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/56 (75%), Positives = 45/56 (80%), Gaps = 2/56 (3%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQP-PVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA      P P DR+A+LSL  N+VS
Sbjct: 597 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLNDNIVS 652


>ref|XP_002301171.2| hypothetical protein POPTR_0002s12570g [Populus trichocarpa]
           gi|550344867|gb|EEE80444.2| hypothetical protein
           POPTR_0002s12570g [Populus trichocarpa]
          Length = 657

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLR VA       P D+LA+LSL +N+VS
Sbjct: 597 EMDQTEVLHLLESPEALKAKVAEAMEVLRTVAAQQQINNPADQLASLSLNENLVS 651


>gb|EMJ02396.1| hypothetical protein PRUPE_ppa002607mg [Prunus persica]
          Length = 653

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA         D+LA+LSL +N+VS
Sbjct: 599 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQQAGNAADQLASLSLNENLVS 653


>gb|EOY14403.1| Poly(A) binding protein 8 isoform 1 [Theobroma cacao]
          Length = 648

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEA+EVLR+VA       P D+LA+LSL  N+VS
Sbjct: 594 EMDQTEVLHLLESPEALKAKVAEALEVLRSVAAQQQANSPADQLASLSLNDNLVS 648


>gb|EXB54169.1| Polyadenylate-binding protein 2 [Morus notabilis]
          Length = 647

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/56 (73%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVA-XXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA        P DR+A LSL  N+VS
Sbjct: 592 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQTPQANSPTDRMATLSLNDNIVS 647


>ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|296082381|emb|CBI21386.3| unnamed protein product
           [Vitis vinifera]
          Length = 654

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA       P DR+A+LSL + ++
Sbjct: 601 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQANN-PTDRMASLSLNDTLT 653


>emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
          Length = 657

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQNVV 241
           EMDQTEVLHLLESPEAL +KVAEAM+VLRNVA       P  +LAALSL + +
Sbjct: 603 EMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQHNANTPTSQLAALSLGDAI 655


>gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
          Length = 613

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQNVV 241
           EMDQTEVLHLLESPEAL +KVAEAM+VLRNVA       P  +LAALSL + +
Sbjct: 559 EMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQHNANTPTSQLAALSLGDAI 611


>gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
          Length = 659

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQNVV 241
           EMDQTEVLHLLESPEAL +KVAEAM+VLRNVA       P  +LAALSL + +
Sbjct: 605 EMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQHNANTPTSQLAALSLGDAI 657


>ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
           gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza
           sativa Japonica Group] gi|113564819|dbj|BAF15162.1|
           Os04g0504800 [Oryza sativa Japonica Group]
           gi|215695125|dbj|BAG90316.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 659

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQNVV 241
           EMDQTEVLHLLESPEAL +KVAEAM+VLRNVA       P  +LAALSL + +
Sbjct: 605 EMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQHNANTPTSQLAALSLGDAI 657


>gb|EMS47633.1| Polyadenylate-binding protein 2 [Triticum urartu]
          Length = 567

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQNVV 241
           EMDQTEVLHLLESPEAL +KVAEAM+VLRNVA       P  +LA L+L +V+
Sbjct: 513 EMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQQNPNAPTSQLAGLTLSDVI 565


>ref|XP_004304018.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
           subsp. vesca]
          Length = 651

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLRNVA         D+LA++SL  N+VS
Sbjct: 597 EMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQQAGGAADQLASMSLNDNLVS 651


>ref|XP_004978120.1| PREDICTED: polyadenylate-binding protein 2-like [Setaria italica]
          Length = 692

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/49 (73%), Positives = 39/49 (79%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL 253
           EMDQTEVLHLLESPEAL +KVAEAM+VLRNVA       P  +LAALSL
Sbjct: 639 EMDQTEVLHLLESPEALKSKVAEAMDVLRNVAHQQNPNTPTSQLAALSL 687


>gb|EXC17307.1| Polyadenylate-binding protein 2 [Morus notabilis]
          Length = 651

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/55 (70%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLR VA         D+LA+LSL  N+VS
Sbjct: 597 EMDQTEVLHLLESPEALKAKVAEAMEVLRTVAQQQQAGNAADQLASLSLTDNIVS 651


>ref|XP_006473293.1| PREDICTED: polyadenylate-binding protein 8-like [Citrus sinensis]
          Length = 652

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSL-QNVVS 238
           EMDQTEVLHLLESPEAL AKVAEAMEVLR+VA       P D+LA+LSL +N+VS
Sbjct: 599 EMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN-PADQLASLSLNENLVS 652


>gb|ESW25573.1| hypothetical protein PHAVU_003G0475001g, partial [Phaseolus
           vulgaris]
          Length = 561

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/51 (70%), Positives = 40/51 (78%)
 Frame = -3

Query: 399 EMDQTEVLHLLESPEALSAKVAEAMEVLRNVAXXXXXQPPVDRLAALSLQN 247
           EMDQTEVLHLLESPEAL AKVAEAM+VLRNVA         D+LA+LSL +
Sbjct: 509 EMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQQQQAGGAADQLASLSLND 559


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