BLASTX nr result

ID: Zingiber24_contig00024714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024714
         (1038 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569049.1| PREDICTED: uncharacterized protein LOC100834...    64   7e-08
ref|XP_004960366.1| PREDICTED: uncharacterized protein LOC101781...    62   3e-07
gb|EMT26446.1| Nuclear receptor corepressor 1 [Aegilops tauschii]      59   3e-06

>ref|XP_003569049.1| PREDICTED: uncharacterized protein LOC100834612 [Brachypodium
            distachyon]
          Length = 431

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 70/251 (27%), Positives = 98/251 (39%), Gaps = 15/251 (5%)
 Frame = +3

Query: 324  TNGASQSNHLFLPDKHWDKGNVSTLHSVPAPFHPVRIEHQ-SDADLRTCSEKAGAEVEEH 500
            T G S S+          +   S L +  A F   R      +  L TCS+KA  E  + 
Sbjct: 172  TGGTSHSDQFTSSKYQNGRSGCSALSNASAGFPLTRNSAGLREGQLETCSQKASTESYDQ 231

Query: 501  --KPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPWLPKMDGALNSACQLNLETTCGF 674
              +PGDVKLFGKILS  +            +     P + K +  L  + +  +      
Sbjct: 232  VKRPGDVKLFGKILSHQSSLQSSGSSSNGIKSKPPSPNIDKSEARLLQSGRDRMVFPSRP 291

Query: 675  WDSKRIQTDFSSL------------PDTASMLLEFKGSPTIVSHNPAKGGSPGCDDIVTG 818
             ++  +  D  S+            PD+       + S   V    AK G+        G
Sbjct: 292  ANTAHLGLDEQSVMSYTHLDGSPVHPDSMFRAANCQRSLAGVPFYSAKNGT-------LG 344

Query: 819  AMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQQMRVXXXXXXXXXXXXXXXX 998
              ++Y Q  MQ LPS+ K+ E+F  LQKR  IE I GFQQ  +                 
Sbjct: 345  GFAEYQQPSMQQLPSDPKR-ESFADLQKRNGIELISGFQQPGKA------SRLGGAGIIV 397

Query: 999  XAVSDPITALK 1031
             AVSDP+ ALK
Sbjct: 398  GAVSDPVAALK 408


>ref|XP_004960366.1| PREDICTED: uncharacterized protein LOC101781442 isoform X1 [Setaria
            italica] gi|514743367|ref|XP_004960367.1| PREDICTED:
            uncharacterized protein LOC101781442 isoform X2 [Setaria
            italica]
          Length = 1708

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 91/346 (26%), Positives = 132/346 (38%), Gaps = 16/346 (4%)
 Frame = +3

Query: 42   SFLSDPADLCSGGSPRILYETTLNLEEYGNNKHKNLIKRDLCPQYMLRNLPFSQVDRDVN 221
            S + DP  +C  G   I   T  N ++ GN     L  +D+      ++   +Q D    
Sbjct: 1370 SAVPDPTVICFDGIASI---TMPNFDDSGNRVSSALGAKDMSKYPAFKDPTGNQHDALFR 1426

Query: 222  ILRGYPLQSANQEANGETTIHAGTKLSRL--RMEAVTNGASQSNHLFLPDKHWDKGNVST 395
             + GY             T H  TKL     R  + T   SQ++   L    +  G  S+
Sbjct: 1427 NVDGY-------------TNHLTTKLPFFSERTASGTVSTSQTDRFTLTK--FQNGRSSS 1471

Query: 396  LHSVPAPFHPV----RIEHQSDADLRTCSEKAGAEVEEH--KPGDVKLFGKILSVTTXXX 557
            L  +P     +    + E      LR+CS    +E +E   +PGDVKLFGKILS  +   
Sbjct: 1472 L-GLPNTSDGIQWARKHEEVLQGSLRSCSHNTSSEGDEQQKRPGDVKLFGKILSHQSSLQ 1530

Query: 558  XXXXXXXXXRESDRQPWLPKMDGALNSACQLNLETTCGFWDSKRIQTDFSSLPDTASMLL 737
                     +    +P  PK+D  ++S   LN         S+   T       TA    
Sbjct: 1531 SPVPPCNGNKS---KPPSPKID--ISSVRSLNNPRDRVVCSSRPGITHLGLEERTAKSYG 1585

Query: 738  EFKGSPT------IVSHNPAKGGSP--GCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPG 893
               GS T      +++   +  G P     +   G  SDY Q  +Q   S+ K+ E F  
Sbjct: 1586 HLDGSTTQPEPLLMMAKCQSLAGVPFYSAKNGTVGVFSDYQQPSIQPHQSDPKRLERFSD 1645

Query: 894  LQKRGLIETIPGFQQQMRVXXXXXXXXXXXXXXXXXAVSDPITALK 1031
             QKR  +E I GFQQ  ++                  VSDP+ ALK
Sbjct: 1646 PQKRNGVEFISGFQQPSKI------SRFGGAGILVSGVSDPVAALK 1685


>gb|EMT26446.1| Nuclear receptor corepressor 1 [Aegilops tauschii]
          Length = 1561

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 56/183 (30%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
 Frame = +3

Query: 447  DADLRTCSEKAGAEV--EEHKPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPWLPK- 617
            +  L+ CS KA  E   +  +PGDVKLFGKILS  +            R     P     
Sbjct: 1321 EGQLKPCSHKASTESCDQVKRPGDVKLFGKILSHQSSLQSSGSSSNATRSKPPPPTTAAG 1380

Query: 618  -----MDGALNSACQLNLETTCGFWDSKRIQTDFSSLPDTA----SMLLEF----KGSPT 758
                 MD  + S+   N   T  F   +R+   ++ L  +     S L       + S  
Sbjct: 1381 LLGSGMDRMVYSSRPTN---TAHFGQDERVVRSYTHLDGSTAQPESSLFRVAKCQRSSLA 1437

Query: 759  IVSHNPAKGGSPGCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQ 938
             V    AK G+        G  ++Y Q   Q LPS+ K+ E++  LQKR  IE I GFQQ
Sbjct: 1438 SVPFYSAKNGT-------LGVFAEYQQPLRQQLPSDPKRLESYADLQKRNGIELISGFQQ 1490

Query: 939  QMR 947
            Q +
Sbjct: 1491 QQQ 1493


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