BLASTX nr result

ID: Zingiber24_contig00024662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024662
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338021.1| PREDICTED: MADS-box transcription factor 27-...    57   2e-06
ref|XP_004164896.1| PREDICTED: agamous-like MADS-box protein AGL...    56   4e-06
ref|XP_004136416.1| PREDICTED: MADS-box transcription factor 27-...    56   4e-06
ref|XP_004238023.1| PREDICTED: MADS-box transcription factor 27-...    55   1e-05

>ref|XP_006338021.1| PREDICTED: MADS-box transcription factor 27-like isoform X2
           [Solanum tuberosum]
          Length = 224

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
 Frame = -1

Query: 209 TLRKTHTVNFPVHQVWQKKAASLRQQLHN---NCRQLMGQELSGLSAKDLQN 63
           T  + H +  P  + WQ++AA LRQQL N   N RQ+MG+ELSGLS KDLQN
Sbjct: 72  TKEENHQLATPTSEFWQREAAMLRQQLQNLQENHRQMMGEELSGLSVKDLQN 123


>ref|XP_004164896.1| PREDICTED: agamous-like MADS-box protein AGL16-like [Cucumis
           sativus]
          Length = 263

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = -1

Query: 209 TLRKTHTVNFPVHQV--WQKKAASLRQQL---HNNCRQLMGQELSGLSAKDLQN 63
           T  + H +  P  +V  WQ++AA+LRQQL   H N RQ+MG+EL+GLS KDLQN
Sbjct: 11  TKEENHQLGIPTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSVKDLQN 64


>ref|XP_004136416.1| PREDICTED: MADS-box transcription factor 27-like [Cucumis sativus]
          Length = 234

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
 Frame = -1

Query: 209 TLRKTHTVNFPVHQV--WQKKAASLRQQL---HNNCRQLMGQELSGLSAKDLQN 63
           T  + H +  P  +V  WQ++AA+LRQQL   H N RQ+MG+EL+GLS KDLQN
Sbjct: 72  TKEENHQLGIPTSEVKYWQREAATLRQQLQSLHENHRQMMGEELTGLSVKDLQN 125


>ref|XP_004238023.1| PREDICTED: MADS-box transcription factor 27-like [Solanum
           lycopersicum]
          Length = 226

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
 Frame = -1

Query: 209 TLRKTHTVNFPVHQV--WQKKAASLRQQLHN---NCRQLMGQELSGLSAKDLQN 63
           T  + H +  P  +V  WQ++AA LRQQL N   N RQ+MG+ELSGLS KDLQN
Sbjct: 72  TKEENHQLETPTSEVRFWQREAAMLRQQLQNLQENHRQMMGEELSGLSVKDLQN 125


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