BLASTX nr result
ID: Zingiber24_contig00024608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00024608
(1451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 533 e-149
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 533 e-149
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 530 e-148
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 530 e-148
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] 530 e-148
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 527 e-147
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 527 e-147
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 526 e-147
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 525 e-146
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 525 e-146
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 525 e-146
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 525 e-146
sp|Q8L6J2.1|RPO2A_TOBAC RecName: Full=DNA-directed RNA polymeras... 525 e-146
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 522 e-145
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 522 e-145
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 521 e-145
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 521 e-145
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 521 e-145
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 521 e-145
emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 518 e-144
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 533 bits (1373), Expect = e-149
Identities = 261/318 (82%), Positives = 289/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRSSSPETTISH+PVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V
Sbjct: 493 ALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 552
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IMQRDAQ+DPA PNAL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 553 LDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 612
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
AD+ E+ SA+ YAAKTTLTALGEMFE+AR IM+WLGDCAK+IA++NH VRW +PLGL
Sbjct: 613 CAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGL 672
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQV+SLQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+
Sbjct: 673 PVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQ 732
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+AGL+FAGVHDS+WTHAC+VD+MN ILREKFVELY PILENLLE FQ++FPTL FPPLP
Sbjct: 733 KAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLP 792
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 793 ERGDFDLREVLESPYFFN 810
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 533 bits (1373), Expect = e-149
Identities = 261/318 (82%), Positives = 289/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRSSSPETTISH+PVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V
Sbjct: 661 ALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 720
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IMQRDAQ+DPA PNAL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 721 LDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 780
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
AD+ E+ SA+ YAAKTTLTALGEMFE+AR IM+WLGDCAK+IA++NH VRW +PLGL
Sbjct: 781 CAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGL 840
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQV+SLQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+
Sbjct: 841 PVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQ 900
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+AGL+FAGVHDS+WTHAC+VD+MN ILREKFVELY PILENLLE FQ++FPTL FPPLP
Sbjct: 901 KAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLP 960
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 961 ERGDFDLREVLESPYFFN 978
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 530 bits (1366), Expect = e-148
Identities = 257/318 (80%), Positives = 287/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET IS++P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V
Sbjct: 685 ALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 744
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK+R
Sbjct: 745 LDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKER 804
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +NH VRWT+PLGL
Sbjct: 805 GVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGL 864
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 865 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 924
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+GLSFAGVHDS+WTHAC+VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 925 ESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 984
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 985 ERGDFDLREVLESPYFFN 1002
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 530 bits (1366), Expect = e-148
Identities = 257/318 (80%), Positives = 287/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET IS++P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V
Sbjct: 685 ALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 744
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK+R
Sbjct: 745 LDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKER 804
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +NH VRWT+PLGL
Sbjct: 805 GVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGL 864
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 865 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 924
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+GLSFAGVHDS+WTHAC+VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 925 ESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 984
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 985 ERGDFDLREVLESPYFFN 1002
>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 715
Score = 530 bits (1366), Expect = e-148
Identities = 257/318 (80%), Positives = 287/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET IS++P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V
Sbjct: 398 ALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 457
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLK+R
Sbjct: 458 LDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKER 517
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +NH VRWT+PLGL
Sbjct: 518 GVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGL 577
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 578 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 637
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+GLSFAGVHDS+WTHAC+VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 638 ESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 697
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 698 ERGDFDLREVLESPYFFN 715
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 527 bits (1357), Expect = e-147
Identities = 256/318 (80%), Positives = 287/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPETTIS++PVHQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V
Sbjct: 689 ALRSPSPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARV 748
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+ DA++DPA NPNAL AR+L+ QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLK+R
Sbjct: 749 LDIMRNDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKER 808
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD L +AA YAA+TTLTALGEMFE+AR IM+WLG+CAK+IA++N VRW +PLGL
Sbjct: 809 GSIADDTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGL 868
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQV++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK
Sbjct: 869 PVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 928
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+AGL+FAGVHDS+WTHAC++D+MN ILREKFVELYE PILENLLE FQQ+FPTL FPPLP
Sbjct: 929 KAGLNFAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLP 988
Query: 549 ERGDFDPRDVLNSTYFFN 496
+RGDFD RDVL S YFFN
Sbjct: 989 DRGDFDLRDVLESPYFFN 1006
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 993
Score = 527 bits (1357), Expect = e-147
Identities = 257/318 (80%), Positives = 285/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET+ISH+P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V
Sbjct: 676 ALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 735
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 736 LDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 795
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +N VRWT+PLGL
Sbjct: 796 GAIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGL 855
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 856 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 915
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
AGLSFAGVHDS+WTHA +VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 916 EAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 975
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 976 ERGDFDLREVLESPYFFN 993
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 526 bits (1356), Expect = e-147
Identities = 257/318 (80%), Positives = 284/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET+ISH+P+HQDGSCNGLQHYAALGRDK GAAAVNLV GDKPADVYSGIAA V
Sbjct: 676 ALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 735
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 736 LDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 795
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G D EL SAA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +N VRWT+PLGL
Sbjct: 796 GAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGL 855
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ CK
Sbjct: 856 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCK 915
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
AGLSFAGVHDS+WTHA +VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 916 EAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 975
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 976 ERGDFDLREVLESPYFFN 993
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 525 bits (1353), Expect = e-146
Identities = 256/318 (80%), Positives = 285/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET IS++P+HQDGSCNGLQHYAALGRD GAAAVNLV GDKPADVYSGIAA V
Sbjct: 685 ALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARV 744
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 745 LDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 804
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +NH VRWT+PLGL
Sbjct: 805 GVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGL 864
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 865 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 924
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+GLSFAGVHDS+WTHA +VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 925 ESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 984
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 985 ERGDFDLREVLESPYFFN 1002
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 525 bits (1353), Expect = e-146
Identities = 256/318 (80%), Positives = 285/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET IS++P+HQDGSCNGLQHYAALGRD GAAAVNLV GDKPADVYSGIAA V
Sbjct: 685 ALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARV 744
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 745 LDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 804
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +NH VRWT+PLGL
Sbjct: 805 GVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGL 864
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 865 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 924
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+GLSFAGVHDS+WTHA +VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 925 ESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 984
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 985 ERGDFDLREVLESPYFFN 1002
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 525 bits (1353), Expect = e-146
Identities = 256/318 (80%), Positives = 285/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRS SPET IS++P+HQDGSCNGLQHYAALGRD GAAAVNLV GDKPADVYSGIAA V
Sbjct: 685 ALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARV 744
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA +DPA +PN + AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 745 LDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 804
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV D EL +AA YAAKTTLTALGEMFE+AR IM+WLGDCAKIIA +NH VRWT+PLGL
Sbjct: 805 GVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGL 864
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQ+++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 865 PVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 924
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+GLSFAGVHDS+WTHA +VDQMN ILREKFVELY+ PILENLLESFQQ+FP L+FPPLP
Sbjct: 925 ESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLP 984
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 985 ERGDFDLREVLESPYFFN 1002
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 525 bits (1352), Expect = e-146
Identities = 256/318 (80%), Positives = 287/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
A+RSSSPET++SHIPVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V
Sbjct: 703 AVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 762
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDAQ+DPAE P+A+ ARVLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 763 LDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 822
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD EL AA YAAK TLTALGEMFE+AR IM WLG+CAKIIA++N VRWT+PLGL
Sbjct: 823 GAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 882
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR +G L++TSLQ+++LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+
Sbjct: 883 PVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 942
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
RAGL+FAGVHDS+WTHAC+VD++N ILREKFVELYE PILE LLESFQ ++PTL FPPLP
Sbjct: 943 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLP 1002
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD RDVL S YFFN
Sbjct: 1003 ERGDFDMRDVLESPYFFN 1020
>sp|Q8L6J2.1|RPO2A_TOBAC RecName: Full=DNA-directed RNA polymerase 2A; AltName:
Full=NictaRpoT2-syl; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2A
gi|21425675|emb|CAC95025.1| mitochondrial and plastid RNA
polymerase [Nicotiana tabacum]
Length = 332
Score = 525 bits (1352), Expect = e-146
Identities = 256/318 (80%), Positives = 287/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
A+RSSSPET++SHIPVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V
Sbjct: 15 AVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 74
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDAQ+DPAE P+A+ ARVLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 75 LDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 134
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD EL AA YAAK TLTALGEMFE+AR IM WLG+CAKIIA++N VRWT+PLGL
Sbjct: 135 GAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 194
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR +G L++TSLQ+++LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+
Sbjct: 195 PVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 254
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
RAGL+FAGVHDS+WTHAC+VD++N ILREKFVELYE PILE LLESFQ ++PTL FPPLP
Sbjct: 255 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLP 314
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD RDVL S YFFN
Sbjct: 315 ERGDFDMRDVLESPYFFN 332
>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 1019
Score = 522 bits (1345), Expect = e-145
Identities = 255/318 (80%), Positives = 284/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
A+RSSSPET ISHIPVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V
Sbjct: 702 AVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 761
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM RDAQ+DPAE P+A+ ARVLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 762 LDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 821
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD EL AASYAAK TLTALGEMFE+AR IM WL +CAKIIA++N VRWT+PLGL
Sbjct: 822 GAIADDSELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIASENEPVRWTTPLGL 881
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR +G ++TSLQ+++LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+
Sbjct: 882 PVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 941
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
RAGL+FAGVHDS+WTHAC+VD++N ILREKFVELYE PILE LLESFQ ++PTL FPPLP
Sbjct: 942 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQVSYPTLSFPPLP 1001
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD RDV+ S YFFN
Sbjct: 1002 ERGDFDLRDVIESPYFFN 1019
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 522 bits (1344), Expect = e-145
Identities = 254/318 (79%), Positives = 286/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
A+RSSSPET++SHIPVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPA+ YSGIAA V
Sbjct: 703 AVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARV 762
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDAQ+DPAE P+A+ ARVLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 763 LDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 822
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD EL AA YAAK TLTALGEMFE+AR IM WLG+CAKIIA++N VRWT+PLGL
Sbjct: 823 GAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 882
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR +G L++TSLQ+++LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+
Sbjct: 883 PVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 942
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
RAGL+FAGVHDS+WTHAC+VD++N ILREKFVELYE PILE LLESFQ ++PTL FPPLP
Sbjct: 943 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLP 1002
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD RDVL S YFFN
Sbjct: 1003 ERGDFDMRDVLESPYFFN 1020
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 521 bits (1343), Expect = e-145
Identities = 253/318 (79%), Positives = 288/318 (90%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRSSSPETTISH+PVHQDGSCNGLQHYAALGRDK GAA+VNLV G+KPADVYSGIAA V
Sbjct: 679 ALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARV 738
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA++DPA NP+AL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 739 VDIMRRDAEKDPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 798
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
AD E+ A+ YAA+TTLTALGEMF++AR IMNWLG+CAK+I+++N VRW +PLGL
Sbjct: 799 CAIADDTEMFVASCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGL 858
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQV++LQ+ETDKVM KRQRTAFPPNFVHSLDGSHMMMTAVACK
Sbjct: 859 PVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACK 918
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+AGL+FAGVHDS+WTHAC+VD+MN ILREKFVELYE PILENLLESFQ++FP+L FPPLP
Sbjct: 919 KAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLP 978
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 979 ERGDFDLREVLESPYFFN 996
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 521 bits (1343), Expect = e-145
Identities = 255/318 (80%), Positives = 286/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
A+RSSSPET+ISHIPVHQDGSCNGLQHYAALGRD+ GAAAVNLV G+KPADVYSGIAA V
Sbjct: 704 AVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARV 763
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDAQ+DPAE P+A+ AR LV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 764 LDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 823
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD EL AA YAAK TLTALGEMFE+AR IM WLG+CAKIIA++N VRWT+PLGL
Sbjct: 824 GAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 883
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR +G L++TSLQ+++LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+
Sbjct: 884 PVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 943
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
RAGL+FAGVHDS+WTHAC+VD++N ILREKFVELYE PILE LLESFQ ++PTL FPPLP
Sbjct: 944 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLP 1003
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD RDVL S YFFN
Sbjct: 1004 ERGDFDLRDVLESPYFFN 1021
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 521 bits (1343), Expect = e-145
Identities = 254/318 (79%), Positives = 286/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRD+ GA AVNLV G+KPADVYSGIAA V
Sbjct: 718 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARV 777
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM+RDA++DPA P+AL AR+L+ QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 778 LDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 837
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
AD EL AA YAAK TLTALGEMF++AR IM+WLGDCAKIIA++N VRWT+PLGL
Sbjct: 838 NAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGL 897
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQV++LQ+ET+ +MVKRQRTAFPPNFVHSLDGSHMMMTA+ACK
Sbjct: 898 PVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACK 957
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+AGL+FAGVHDS+WTHAC+VD+MN +LREKFV+LYE PILENLLESFQQ+FP LEFPPLP
Sbjct: 958 KAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLP 1017
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD R+VL S YFFN
Sbjct: 1018 ERGDFDLREVLESPYFFN 1035
>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Solanum lycopersicum]
Length = 1022
Score = 521 bits (1341), Expect = e-145
Identities = 253/318 (79%), Positives = 283/318 (88%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
A+RSSSPET ISH+PVHQDGSCNGLQHYAALGRDK GAAAVNLV G+KPADVYSGIAA V
Sbjct: 705 AVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 764
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
IM RDAQ+DPAE P+A+ ARVLV QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK+R
Sbjct: 765 LDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 824
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
G AD EL AA YAAK TLTALGEMFE+AR IM WLG+CAKIIA++N VRWT+PLGL
Sbjct: 825 GAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 884
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR +G ++TSLQ+++LQ+ET+KVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC+
Sbjct: 885 PVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 944
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
RAGL+FAGVHDS+WTHAC+VD++N ILREKFVELYE PILE LLE FQ ++PTL FPPLP
Sbjct: 945 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLP 1004
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERGDFD RDV+ S YFFN
Sbjct: 1005 ERGDFDLRDVIESPYFFN 1022
>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
Length = 862
Score = 518 bits (1335), Expect = e-144
Identities = 253/318 (79%), Positives = 284/318 (89%)
Frame = -3
Query: 1449 ALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKFGAAAVNLVDGDKPADVYSGIAAGV 1270
ALRSSSPET ISHIPVHQDGSCNGLQHYAALGRDK GA AVNLV G+KPADVYSGIAA V
Sbjct: 545 ALRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARV 604
Query: 1269 QKIMQRDAQQDPAENPNALLARVLVGQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKDR 1090
+IM+RDAQ+DPA++ +A AR+LV QVDR+LVKQTVMTSVYGVTY+GAR+QIKRRLK+R
Sbjct: 605 VEIMKRDAQKDPAKDADAARARLLVDQVDRRLVKQTVMTSVYGVTYVGAREQIKRRLKER 664
Query: 1089 GVFADQRELSSAASYAAKTTLTALGEMFESARCIMNWLGDCAKIIATKNHAVRWTSPLGL 910
GV AD EL A+ YAAK TLTALGEMFE+AR IMNWLGDCAK+IA +N VRW +PLGL
Sbjct: 665 GVIADDSELFGASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWKTPLGL 724
Query: 909 PVVQPYRALGTQLVRTSLQVVSLQKETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 730
PVVQPYR LG L++TSLQV++LQ+ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK
Sbjct: 725 PVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK 784
Query: 729 RAGLSFAGVHDSFWTHACNVDQMNTILREKFVELYEKPILENLLESFQQNFPTLEFPPLP 550
+ GL FAGVHDS+WTHAC+VD MN ILREKFVELY+ PILENLLESF+ +FP L+FPPLP
Sbjct: 785 KQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLESFETSFPKLKFPPLP 844
Query: 549 ERGDFDPRDVLNSTYFFN 496
ERG+FD +DVL STYFFN
Sbjct: 845 ERGNFDMKDVLQSTYFFN 862