BLASTX nr result

ID: Zingiber24_contig00024531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024531
         (1446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247369.1| PREDICTED: protein TIME FOR COFFEE-like [Sol...    84   1e-13
ref|XP_002315782.2| hypothetical protein POPTR_0010s10000g [Popu...    80   2e-12
ref|XP_002311616.2| hypothetical protein POPTR_0008s15060g [Popu...    71   1e-09

>ref|XP_004247369.1| PREDICTED: protein TIME FOR COFFEE-like [Solanum lycopersicum]
          Length = 1645

 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 130/506 (25%), Positives = 173/506 (34%), Gaps = 38/506 (7%)
 Frame = -1

Query: 1422 PQAFTVPFASFGGVVNAPPDLDFSMAENHAILQSLPETFRHGYYQMXXXXXXXATEHKKI 1243
            PQ F + FASF G   A P +D SMA NHAI QSLPE  R    QM       A + KK 
Sbjct: 1104 PQPFAMSFASFNGAT-AGPGIDMSMAHNHAIFQSLPEATRQN-LQMAAAAAAQAVQQKKN 1161

Query: 1242 NHVSEDGKS--------------LAME----------LRNTNINEADGKTVVASKGIXXX 1135
              VSEDGKS              LAM+             ++ ++A G T+ A+  I   
Sbjct: 1162 FRVSEDGKSGSGDQSGADAERKGLAMKPSGNAGQSIAFSRSDTSDASGSTIAANSVIDSS 1221

Query: 1134 XXXXXXXXQPHKPIQPPASRLSDHSAGIMPASTSLTATTIAGNSXXXXXXXXXXXXXXXX 955
                       + +  P+       A +  A  S+        +                
Sbjct: 1222 T----------RSLNLPSGASWTARAAMPNAMGSVNVPNAQLQAQIQQQQQQMLQLHKQH 1271

Query: 954  XXXXXXLA-SSRSKPSNSGNNVGVHHDSLPAGSTISKNPHALTGFPQALIQGG---NPIH 787
                   A ++RSK S S N          + S  SK P+A++ FPQ L+Q G   N   
Sbjct: 1272 QQHQFAAAVAARSKTSASSNGNVYSEHLTSSASAASKFPNAMSAFPQNLVQSGNNSNQAQ 1331

Query: 786  WPQGKSSAGRGVDPGGAAPAPVVKNNFLQLQGRASQQSLPSQGHQTQISFGINGNK---Q 616
             PQ K+S         ++ +       L  Q +  QQ + SQ   TQI+FG N       
Sbjct: 1332 SPQWKNSTRTSTSQAPSSLSSTSSLKSLSQQQQQQQQHVRSQQSHTQITFGTNQRSTPPP 1391

Query: 615  GGQHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRASAHLKPSPQASAILLSQQTNVK 436
             GQ                                P  SA        ++ L +QQ    
Sbjct: 1392 PGQQPPNSNQSPSSPMMVGSPTTSSISKGASGSPRPTNSATTSNKTGQNSSLSTQQ-GKS 1450

Query: 435  QXXXXXXXXXXXXXXNMASILG--HHAQKFPA----PSSTTKQQQPHLPKQQSSEAQLFF 274
                           N+ SILG  H+          P  + +QQQ HL K    +AQLFF
Sbjct: 1451 SSSVPNQKSSPAGGRNVPSILGNPHNIASTSGGGTKPQMSQQQQQQHLHKSM-QQAQLFF 1509

Query: 273  SNPNLXXXXXXXXXXXXXXXXQKRPY-EXXXXXXXXXQHNSGPSASGMXXXXXXXXXXXA 97
            S+P +                    Y +         Q   G SA+              
Sbjct: 1510 SSPYVQAQPPHSSGTSSAGQATGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCPVTL 1569

Query: 96   GVPTASDPTKATMAVNSLAAAKNLKG 19
            G  T SDP KA  A    AAA N+KG
Sbjct: 1570 GGGTTSDPAKAIAAA---AAANNMKG 1592


>ref|XP_002315782.2| hypothetical protein POPTR_0010s10000g [Populus trichocarpa]
            gi|550329479|gb|EEF01953.2| hypothetical protein
            POPTR_0010s10000g [Populus trichocarpa]
          Length = 1613

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 112/414 (27%), Positives = 148/414 (35%), Gaps = 30/414 (7%)
 Frame = -1

Query: 1419 QAFTVPFASFGGVVNAPPDLDFS-MAENHAILQSLPETFRHGYYQMXXXXXXXATEHKKI 1243
            QAF + F S  G   A P LDFS +A +HA+LQSLPE  RHGY+ +       A + KK 
Sbjct: 1091 QAFAMSFTSINGTT-ASPGLDFSSIAHDHALLQSLPEAARHGYHLI---AAAQAAQQKKN 1146

Query: 1242 NHVSEDGKSLAMELRNTNINEADGKTVVASKG--IXXXXXXXXXXXQPHKPIQP-PASRL 1072
              VSE+GK+   +  N    E + K +   K                   PI   P + +
Sbjct: 1147 YRVSEEGKTGGNDTSNV---EEERKAIAGVKAPLTAGQSIVFSRADLTDSPISTMPVNNV 1203

Query: 1071 SDHSA-----GIMPAST--SLTATTIAG-----------NSXXXXXXXXXXXXXXXXXXX 946
             D SA     G  PA T  S+ + TI+G            +                   
Sbjct: 1204 IDSSARTLNLGTTPARTSGSVMSATISGANAPSIQQQMQRNQQQQQQQQQILQLQKQQHQ 1263

Query: 945  XXXLASSRSKPSNSGNNVGVHHDSLPAGSTISKNPHALTGFPQALIQ-GGNPIHWPQGKS 769
                ASSRSK   + N          + +  +K P+ L+ FPQ  +Q   +P   PQ K+
Sbjct: 1264 FVAAASSRSKTPATSNGSAYPDHISSSSAMATKFPNPLSAFPQNFVQNSSSPAQSPQWKN 1323

Query: 768  S---AGRGVDPGGAAPAPVVKNNFLQLQGRASQQSLPSQGHQTQISFGINGNKQGGQHLX 598
            S       V      PA     N  Q QGR       +QG  TQISF  N          
Sbjct: 1324 SVRTTTSQVPSPSLTPASPTLKNLPQQQGR-------TQGGHTQISFAANQKPSASPQGQ 1376

Query: 597  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRASAHLKPSPQASAILLSQQTNVKQXXXXX 418
                                        SPR SA        S+ L SQQ+N        
Sbjct: 1377 PNPSSNQSPSPPMMVGSPTTSISKSAGGSPRTSASTGNKGGQSSTLSSQQSN--SASVPV 1434

Query: 417  XXXXXXXXXNMASILGHHAQKFPAPSSTTKQQQPHLPKQ----QSSEAQLFFSN 268
                     N+ SILGH      + S T  Q     P      Q ++AQL ++N
Sbjct: 1435 QKSSPVGGRNVPSILGHPHNTSSSNSGTKPQMSHQQPLSKHALQQAQAQLMYTN 1488


>ref|XP_002311616.2| hypothetical protein POPTR_0008s15060g [Populus trichocarpa]
            gi|550333109|gb|EEE88983.2| hypothetical protein
            POPTR_0008s15060g [Populus trichocarpa]
          Length = 1600

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 90/296 (30%), Positives = 117/296 (39%), Gaps = 29/296 (9%)
 Frame = -1

Query: 1428 LLPQAFTVPFASFGGVVNAPPDLDFS-MAENHAILQSLPETFRHGYYQMXXXXXXXATEH 1252
            L  Q F + FA   G   A P LD S +A+NHA+LQSLPE  RHGY+             
Sbjct: 1071 LASQTFAMSFAPINGTT-ASPGLDISSLAQNHALLQSLPEAARHGYHHF---IAAAQATQ 1126

Query: 1251 KKINHVSEDGKSLAMELRNTNINE---ADGKTVVASKGIXXXXXXXXXXXQPHKPIQPPA 1081
            +K   VSE+G S   +  N        A GKT + S G             P   +  P 
Sbjct: 1127 QKNYRVSEEGNSGGNDTSNVEEERKAMAGGKTPL-SAGQSIVFSRPDLTDSPVSTM--PV 1183

Query: 1080 SRLSDHSA-----GIMPASTS---LTATTIAGNS------------XXXXXXXXXXXXXX 961
            + + D SA     G  PA TS   ++AT   GN+                          
Sbjct: 1184 NNVVDSSARNLNLGSAPARTSGSFMSATIGTGNAPSMQQQMQRNHHQQQQWNQQIFQFQK 1243

Query: 960  XXXXXXXXLASSRSK-PSNSGNNVGVHHDSLPAGSTISKNPHALTGFPQALIQ-GGNPIH 787
                     AS+RSK P+ S  +V   H S  + S  +K P+AL+ FPQ L+Q   +P  
Sbjct: 1244 QQQFAAAAAASTRSKTPATSNGSVYSDHIS-SSSSAATKFPNALSAFPQNLVQSSSSPAQ 1302

Query: 786  WPQGKSSA---GRGVDPGGAAPAPVVKNNFLQLQGRASQQSLPSQGHQTQISFGIN 628
             PQ KSSA      V       +     N  Q QGR  Q +       + ISF  N
Sbjct: 1303 SPQWKSSARTTTSQVPSSSLTSSSSTLKNLPQQQGRTQQSN-------SHISFAAN 1351


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