BLASTX nr result
ID: Zingiber24_contig00024513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00024513
(368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily p... 101 1e-19
ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006829234.1| hypothetical protein AMTR_s00001p00272430 [A... 92 5e-17
ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17
gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis] 92 7e-17
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 91 1e-16
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|5... 91 2e-16
gb|EMJ16134.1| hypothetical protein PRUPE_ppa001374mg [Prunus pe... 91 2e-16
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,... 91 2e-16
ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [S... 89 5e-16
ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japo... 89 8e-16
gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indi... 89 8e-16
ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group] g... 89 8e-16
ref|NP_179484.1| pentatricopeptide repeat-containing protein [Ar... 88 1e-15
ref|XP_004965679.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006654214.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutr... 87 2e-15
>gb|EOY31850.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 845
Score = 101 bits (251), Expect = 1e-19
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT +AGY S MF + DVI YM +H C PNEL+++ +VDGYCKA+R++EA FV+ I
Sbjct: 761 TYNTFVAGYASQGMFTEIDDVIGYMIQHNCKPNELTYKIVVDGYCKARRYKEAMDFVSKI 820
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
K ID SF EQ ++LA RV E
Sbjct: 821 KEIDDSFDEQSIDRLAFRVRE 841
>ref|XP_006344540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Solanum tuberosum]
Length = 842
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/81 (50%), Positives = 59/81 (72%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT IAG+ + MF + ++ISYM +H C PNEL+++TIVDGYCKAKR+++A FV +I
Sbjct: 758 TYNTFIAGFAARGMFSEVNELISYMIQHECRPNELTYKTIVDGYCKAKRYQDAMDFVLNI 817
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
K D++F E+ + A RV E
Sbjct: 818 KEKDNTFDEESLQRFASRVRE 838
>ref|XP_006829234.1| hypothetical protein AMTR_s00001p00272430 [Amborella trichopoda]
gi|548834213|gb|ERM96650.1| hypothetical protein
AMTR_s00001p00272430 [Amborella trichopoda]
Length = 811
Score = 92.4 bits (228), Expect = 5e-17
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT +AGY S+ +F++ DVI YM EH C PNEL++ T++D YC+A++F +A FV++I
Sbjct: 727 TYNTFVAGYSSLGLFEEVRDVIKYMVEHNCRPNELTYNTVIDAYCRARKFRDAMDFVSNI 786
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+ +D +Q KLA RV E
Sbjct: 787 RELDPLLEDQSVRKLATRVRE 807
>ref|XP_004242906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Solanum lycopersicum]
Length = 842
Score = 92.4 bits (228), Expect = 5e-17
Identities = 40/81 (49%), Positives = 59/81 (72%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT +AG+ + MF + ++ISYM +H C PNEL+++TIVDGYCKAKR+++A FV +I
Sbjct: 758 TYNTFMAGFAARGMFSEVNELISYMIQHKCRPNELTYKTIVDGYCKAKRYQDAMDFVLNI 817
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
K D++F E+ + A RV E
Sbjct: 818 KEKDNTFDEESLQRFASRVRE 838
>gb|EXC05166.1| hypothetical protein L484_003973 [Morus notabilis]
Length = 807
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT + GYV MF + +VI YM E+ C PNEL+++ +VDGYCKA R++EA FV++I
Sbjct: 723 TYNTFVTGYVGRGMFSEVDEVIRYMIENNCRPNELTYKIVVDGYCKAGRYKEAMDFVSNI 782
Query: 186 KNIDSSFPEQLANKLAIRVEER 121
K +D+SF + +LA R+ E+
Sbjct: 783 KEVDNSFDDHSVQRLASRIREK 804
>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
protein product [Vitis vinifera]
Length = 821
Score = 91.3 bits (225), Expect = 1e-16
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT +AGY MF + +VISYM +H C PNEL+++ +VDGYCK K+++EA FV++I
Sbjct: 737 TYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+D SF +Q +L R+ E
Sbjct: 797 TEMDKSFDDQSLRRLTFRIRE 817
>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 91.3 bits (225), Expect = 1e-16
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT +AGY MF + +VISYM +H C PNEL+++ +VDGYCK K+++EA FV++I
Sbjct: 737 TYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+D SF +Q +L R+ E
Sbjct: 797 TEMDKSFDDQSLRRLTFRIRE 817
>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Glycine max]
Length = 829
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT ++GY ME+F +A +VI +M EH C P+EL+++ +VDGYCKA ++EEA FV+ I
Sbjct: 743 TYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKI 802
Query: 186 KNIDSSFPEQLANKLAIRVEER 121
K +D SF +Q +L + ER
Sbjct: 803 KELDISFDDQSVKRLGSCIRER 824
>ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|566176851|ref|XP_006381785.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550336541|gb|ERP59582.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 821
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/81 (49%), Positives = 57/81 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT + GY + MF + +V+SYM +H C PNEL+++ +VDGYCKAK+F+EA FV+ I
Sbjct: 737 TYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTI 796
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+ID SF Q +L+ RV E
Sbjct: 797 TDIDDSFDYQSMRRLSSRVRE 817
>gb|EMJ16134.1| hypothetical protein PRUPE_ppa001374mg [Prunus persica]
Length = 842
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT I GY MF + +VISYM ++ C PNELS++ VDGYCKA++++EA F++ I
Sbjct: 758 TYNTFITGYAGQGMFSEIDEVISYMTQNNCKPNELSYKIAVDGYCKARKYKEAMDFLSKI 817
Query: 186 KNIDSSFPEQLANKLAIRV 130
K ID+SF +Q +LA R+
Sbjct: 818 KEIDNSFDDQYVQRLASRI 836
>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT I+GY + MF + DVISYM H C PNEL+++ + DGYCKA+R++EA FV+ I
Sbjct: 750 TYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKI 809
Query: 186 KNIDSSFPEQLANKLAIRV 130
K++D +F +Q +L RV
Sbjct: 810 KDVDDTFGDQSVRRLVSRV 828
>ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein
SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 89.4 bits (220), Expect = 5e-16
Identities = 37/81 (45%), Positives = 59/81 (72%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T++TL+ GY S+EMF +A +VI+YM +H P EL++R +VD YCKAKRFEEA F++++
Sbjct: 701 TYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEV 760
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
D +F +++ + LA +E+
Sbjct: 761 SETDPNFDKKVLHTLAAYIED 781
>ref|XP_004296451.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Fragaria vesca subsp. vesca]
Length = 846
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT + GY MF + +VISYM ++ C PNEL+++ +VDGYCKA++FEEA F++ I
Sbjct: 753 TYNTFVTGYSGRGMFSEVDEVISYMTQNNCKPNELTYKIVVDGYCKARKFEEAMDFLSKI 812
Query: 186 KNIDSSFPEQLANKLAIRV 130
K ID+SF + +L+ R+
Sbjct: 813 KEIDNSFDDGYVERLSSRI 831
>gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 88.6 bits (218), Expect = 8e-16
Identities = 35/81 (43%), Positives = 60/81 (74%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T++TL+ GY S+EMF +A +V++YM H P EL++R +VD YCKAKR++EA +F+++I
Sbjct: 617 TYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 676
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+ D +F ++L + L R+++
Sbjct: 677 SDTDQNFDQKLQHMLEARIKD 697
>gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 88.6 bits (218), Expect = 8e-16
Identities = 35/81 (43%), Positives = 60/81 (74%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T++TL+ GY S+EMF +A +V++YM H P EL++R +VD YCKAKR++EA +F+++I
Sbjct: 708 TYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+ D +F ++L + L R+++
Sbjct: 768 SDTDQNFDQKLQHMLEARIKD 788
>ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains
pentatricopeptide (PPR) repeat, PF01535 [Oryza sativa
Japonica Group] gi|113578624|dbj|BAF16987.1|
Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 793
Score = 88.6 bits (218), Expect = 8e-16
Identities = 35/81 (43%), Positives = 60/81 (74%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T++TL+ GY S+EMF +A +V++YM H P EL++R +VD YCKAKR++EA +F+++I
Sbjct: 708 TYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+ D +F ++L + L R+++
Sbjct: 768 SDTDQNFDQKLQHMLEARIKD 788
>ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g18940, chloroplastic; Flags: Precursor
gi|3004555|gb|AAC09028.1| putative salt-inducible
protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14
[Arabidopsis thaliana] gi|38564280|gb|AAR23719.1|
At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/81 (48%), Positives = 56/81 (69%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT ++GY +M MF + DVI MA++ C PNEL+F+ +VDGYC+A ++ EA FV+ I
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
K D F +Q +LA+RV E
Sbjct: 798 KTFDPCFDDQSIQRLALRVRE 818
>ref|XP_004965679.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Setaria italica]
Length = 788
Score = 87.8 bits (216), Expect = 1e-15
Identities = 37/81 (45%), Positives = 57/81 (70%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T++TL+ GY S+EMF +A +VISYM +H P EL++R +VD YCKAKR+EEA F++ +
Sbjct: 703 TYHTLVGGYASLEMFSEAREVISYMIQHNLRPMELTYRRVVDSYCKAKRYEEARDFLSGV 762
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
D +F +++ L R+E+
Sbjct: 763 SETDPNFDKKVLRTLVDRIED 783
>ref|XP_006654214.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Oryza brachyantha]
Length = 645
Score = 87.4 bits (215), Expect = 2e-15
Identities = 34/81 (41%), Positives = 59/81 (72%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T++TL+ GY S+EMF +A +V+SYM +H P EL++R +VD YCKAKR++EA F++++
Sbjct: 560 TYHTLVGGYASLEMFNEAREVVSYMIQHNLKPMELTYRRVVDSYCKAKRYDEARDFLSEV 619
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
+ D +F ++ + L R+++
Sbjct: 620 SDTDRNFDQKFQHMLETRIKD 640
>ref|XP_006409097.1| hypothetical protein EUTSA_v10022551mg [Eutrema salsugineum]
gi|557110259|gb|ESQ50550.1| hypothetical protein
EUTSA_v10022551mg [Eutrema salsugineum]
Length = 838
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = -3
Query: 366 TFNTLIAGYVSMEMFKDAADVISYMAEHYCSPNELSFRTIVDGYCKAKRFEEANQFVADI 187
T+NT ++GY +M MF++ DVI MA++ C PNEL+++ +VDGYC+A R+ EA FV+ I
Sbjct: 754 TYNTFVSGYTAMGMFEEIEDVIECMAKNECRPNELTYKMVVDGYCRAGRYSEAMDFVSKI 813
Query: 186 KNIDSSFPEQLANKLAIRVEE 124
K +D+ F +Q +LA RV +
Sbjct: 814 KTLDAYFDDQSIQRLAQRVRD 834