BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024393
         (2007 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [A...   719   0.0  
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   717   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...   714   0.0  
ref|XP_002463658.1| hypothetical protein SORBIDRAFT_01g003750 [S...   712   0.0  
gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]                 709   0.0  
gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]        708   0.0  
gb|AFW67220.1| hypothetical protein ZEAMMB73_149484 [Zea mays]        708   0.0  
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast...   706   0.0  
ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplast...   704   0.0  
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   704   0.0  
ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplast...   702   0.0  
ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...   701   0.0  
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast...   700   0.0  
ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus...   699   0.0  
ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplast...   699   0.0  
gb|ESW25277.1| hypothetical protein PHAVU_003G022300g [Phaseolus...   699   0.0  
ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplast...   694   0.0  
ref|XP_004981303.1| PREDICTED: probable DNA gyrase subunit A, ch...   691   0.0  
gb|AAG51377.1|AC011560_9 putative DNA gyrase subunit A; 1114-760...   688   0.0  
ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana] gi|...   688   0.0  

>ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [Amborella trichopoda]
            gi|548835451|gb|ERM97286.1| hypothetical protein
            AMTR_s00119p00135690 [Amborella trichopoda]
          Length = 963

 Score =  719 bits (1855), Expect = 0.0
 Identities = 380/557 (68%), Positives = 434/557 (77%)
 Frame = +1

Query: 334  LMVEEHSGAQEGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHE 513
            +MV+E   A E  V+ AEL KEA E+Y+AYALSVLVGRALPDVRDGLKPVHRRI++AMHE
Sbjct: 114  VMVKEK--AFEARVVMAELHKEATESYLAYALSVLVGRALPDVRDGLKPVHRRIIFAMHE 171

Query: 514  LGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDA 693
            LG SS KPFKKCARVVGEVLGKFHPHGDTAVY+SLVRMAQDFS+RCPLI+GHGNFGSIDA
Sbjct: 172  LGFSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSMRCPLIQGHGNFGSIDA 231

Query: 694  DPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSG 873
            DPPAAMRYTECRLEAL EAM L+DL+ NTV+FVPNFD SQKEPSLLPAR+PNLLLNGSSG
Sbjct: 232  DPPAAMRYTECRLEALTEAMFLSDLEQNTVNFVPNFDGSQKEPSLLPARVPNLLLNGSSG 291

Query: 874  IAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETY 1053
            IAVGMATNIPPHNLGELVDALS L+ NP+ATLQELLEYMPGPDFPTGG I+ N GIL+ Y
Sbjct: 292  IAVGMATNIPPHNLGELVDALSVLLHNPDATLQELLEYMPGPDFPTGGEIMGNIGILDAY 351

Query: 1054 RTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDI 1233
            RTGRG I+VRGKTDVE+LD K K SA++I+EIPYQTNK +LVEKIAELVE K ++G+ DI
Sbjct: 352  RTGRGRIVVRGKTDVEVLDAKGKLSALVIREIPYQTNKASLVEKIAELVEDKSIEGVSDI 411

Query: 1234 RDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQ 1413
            RDESDRSGMRIVIELKKGSDPSIVLNKLY+ T LQSSFSCNMVGILD QPKLMGLKE+LQ
Sbjct: 412  RDESDRSGMRIVIELKKGSDPSIVLNKLYKLTVLQSSFSCNMVGILDGQPKLMGLKEMLQ 471

Query: 1414 VFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVK 1593
             FL+FR SVIERRARFKL QA  R+H                  +RE SS ++A AAL K
Sbjct: 472  AFLDFRCSVIERRARFKLKQAQEREHIIEGILVGLDNLDDVIHLIRENSSLSMASAALKK 531

Query: 1594 GYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXX 1773
             YNLS+KQAEAL+DI LRKLT LERKKF++E +SL +QIS LN                 
Sbjct: 532  AYNLSDKQAEALLDITLRKLTSLERKKFVEEGESLKEQISKLNELLSSKKLVYQMIEQEA 591

Query: 1774 XXXXHKFGSPRRSLIEDSRSSQLDEINNIPKRCKKVGNQVTKGEIARPQRPRRTRPKAIT 1953
                +KF +PRRS +E+   SQL+EI+ IP       N+      +     +R RP   +
Sbjct: 592  IEVKNKFRTPRRSSLEEGDGSQLEEIDVIP-------NEEMLLVFSEKGYVKRMRPNTFS 644

Query: 1954 REVNRSIRASM*RTRCN 2004
             +   +I  S+ + R N
Sbjct: 645  LQNRGTIGKSVGKMRVN 661


>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score =  717 bits (1851), Expect = 0.0
 Identities = 369/557 (66%), Positives = 436/557 (78%)
 Frame = +1

Query: 334  LMVEEHSGAQEGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHE 513
            L+++E  G ++G ++P EL KEA EAYMAYA+SVL+GRALPDVRDGLKPVHRRIL+AMHE
Sbjct: 68   LVLKEKDG-RDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHE 126

Query: 514  LGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDA 693
            LGLSS KP+KKCARVVGEVLGKFHPHGDTAVY+SLVRMAQDFSLRCPLI+GHGNFGS+DA
Sbjct: 127  LGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSVDA 186

Query: 694  DPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSG 873
            DPPAAMRYTECRLEAL EAMLL DL+ +TVDF+PNFD+SQKEPSLLPAR+P LLLNGSSG
Sbjct: 187  DPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSLLPARLPTLLLNGSSG 246

Query: 874  IAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETY 1053
            IAVGMATNIPPHN+GELVD L  LIRNPEATLQELLEYMPGPDFPTGG+I+ N GILE Y
Sbjct: 247  IAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDFPTGGLIMGNIGILEAY 306

Query: 1054 RTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDI 1233
            RTGRG I+VRGKT+VE+LD K KR+A+IIKEIPYQTNK +LVEKIAELVE+K LDGI DI
Sbjct: 307  RTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSSLVEKIAELVENKSLDGISDI 366

Query: 1234 RDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQ 1413
            RDESDRSGMRIVIELK+GSDPSIVLNKLY+ T LQSSFSCNM+GILD QPKLMGLKELLQ
Sbjct: 367  RDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLMGLKELLQ 426

Query: 1414 VFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVK 1593
             FL+FR SV+ERRARFKLSQA  R+H                  ++E  SN +A   L  
Sbjct: 427  AFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAMASTGLRN 486

Query: 1594 GYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXX 1773
             + LSE+QAEA++DI+LR++T LER+KF+ E KSL +QIS L                  
Sbjct: 487  EFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQILQLIEQEA 546

Query: 1774 XXXXHKFGSPRRSLIEDSRSSQLDEINNIPKRCKKVGNQVTKGEIARPQRPRRTRPKAIT 1953
                ++F +PRRS++ED+ S QL++++ IP       N+     ++     +R +P    
Sbjct: 547  IELKNRFSTPRRSMLEDTDSGQLEDVDVIP-------NEEMLLAVSEKGYVKRMKPNTFN 599

Query: 1954 REVNRSIRASM*RTRCN 2004
             +   +I  S+ + R N
Sbjct: 600  LQNRGTIGKSVGKLRVN 616


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score =  714 bits (1843), Expect = 0.0
 Identities = 374/554 (67%), Positives = 434/554 (78%)
 Frame = +1

Query: 343  EEHSGAQEGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGL 522
            E+ +G +   V+  EL KEA EAYM+YA+SVL+GRALPDVRDGLKPVHRRILYAMHELGL
Sbjct: 82   EDRNGGER--VVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGL 139

Query: 523  SSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPP 702
            SS KP+KKCARVVGEVLGKFHPHGDTAVY+SLVRMAQDFSLR PLIRGHGNFGSIDADPP
Sbjct: 140  SSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPP 199

Query: 703  AAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAV 882
            AAMRYTECRLEAL E+MLL DL+ NTVDFVPNFD+SQKEPSLLPAR+PNLLLNG+SGIAV
Sbjct: 200  AAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSLLPARVPNLLLNGASGIAV 259

Query: 883  GMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTG 1062
            GMATNIPPHNLGELVDALSALI NPEATLQELLEYMPGPDFPTGGII+ N GILE +RTG
Sbjct: 260  GMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFPTGGIIMGNIGILEAFRTG 319

Query: 1063 RGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDE 1242
            RG +++RGKTD+E+LD K KR+AIII+EIPYQTNK +LVEKIA+LVE+KIL+G+ DIRDE
Sbjct: 320  RGRVVIRGKTDIELLDSKTKRAAIIIQEIPYQTNKASLVEKIADLVENKILEGVSDIRDE 379

Query: 1243 SDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFL 1422
            SDRSGMRIVIELK+GSDP+IVLN LY+ T LQSSFSCNMVGIL+ QPKLMGLKELLQ FL
Sbjct: 380  SDRSGMRIVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFL 439

Query: 1423 EFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYN 1602
            +FR SV+ERRARFKLSQA  R H                  +R+ SSN LA A+L K + 
Sbjct: 440  DFRCSVVERRARFKLSQAQERNHIVEGIIVGLDNLDEVINTIRKASSNALAAASLRKEFE 499

Query: 1603 LSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXX 1782
            LSEKQAEA++DI+LR+LT LER KF++E KSL  QIS L                     
Sbjct: 500  LSEKQAEAILDISLRRLTALERNKFVEEGKSLRTQISKLEELLSSKKQILQLIEEEAIEI 559

Query: 1783 XHKFGSPRRSLIEDSRSSQLDEINNIPKRCKKVGNQVTKGEIARPQRPRRTRPKAITREV 1962
             +KF +PRRS++ED+ S  L++I+ IP       N+     I+     +R +P     + 
Sbjct: 560  KNKFFNPRRSMLEDTDSGDLEDIDVIP-------NEEMLLAISEKGYVKRMKPDTFNLQN 612

Query: 1963 NRSIRASM*RTRCN 2004
              +I  S+ + R N
Sbjct: 613  RGTIGKSVGKLRVN 626


>ref|XP_002463658.1| hypothetical protein SORBIDRAFT_01g003750 [Sorghum bicolor]
            gi|241917512|gb|EER90656.1| hypothetical protein
            SORBIDRAFT_01g003750 [Sorghum bicolor]
          Length = 845

 Score =  712 bits (1837), Expect = 0.0
 Identities = 357/497 (71%), Positives = 416/497 (83%)
 Frame = +1

Query: 373  VIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCA 552
            ++P EL KEA +AYM+YA+SVL+GRALPDVRDGLKPVHRRILYAMHE+GL+S +PF+KCA
Sbjct: 96   ILPVELHKEATQAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCA 155

Query: 553  RVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRL 732
            RVVGEVLGKFHPHGDTAVY SLVRMAQDFS+R PL++GHGNFGS+DADPPAAMRYTECRL
Sbjct: 156  RVVGEVLGKFHPHGDTAVYESLVRMAQDFSMRYPLVQGHGNFGSVDADPPAAMRYTECRL 215

Query: 733  EALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHN 912
            ++LAEAM LTDL+LNTVDFVPNFD+SQKEPSLLPAR+P+LLLNGSSGIAVGMATNIPPHN
Sbjct: 216  DSLAEAMFLTDLELNTVDFVPNFDNSQKEPSLLPARVPSLLLNGSSGIAVGMATNIPPHN 275

Query: 913  LGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKT 1092
            LGELVD LS +I+NPEATLQELLE MPGPDFPTGG IL N GILE Y++GRG I+VRGKT
Sbjct: 276  LGELVDVLSVIIQNPEATLQELLECMPGPDFPTGGTILGNQGILEAYKSGRGRIVVRGKT 335

Query: 1093 DVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVI 1272
            D+E +DEK+KR+AIIIKEIPYQTNK  LV+KIAEL E K+L+GI DIRDESDR+GMR+VI
Sbjct: 336  DIETIDEKSKRTAIIIKEIPYQTNKATLVQKIAELAEDKVLEGISDIRDESDRTGMRVVI 395

Query: 1273 ELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERR 1452
            ELK+ +DP+IVLN LY+HT LQSSFSCNMV ILD QPKLMGLKE+LQ FL+FR SVIERR
Sbjct: 396  ELKRSADPAIVLNNLYRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFLDFRCSVIERR 455

Query: 1453 ARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALM 1632
            AR+KLSQAL RKH                  +RETS++T A  ALVK ++LSEKQAEAL+
Sbjct: 456  ARYKLSQALERKHIVEGIVIGLDNLDAVIQMIRETSNHTAATGALVKEFDLSEKQAEALL 515

Query: 1633 DIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRS 1812
            DI L++LT LERKKF+DE K LS++IS LN                     +KF +PRRS
Sbjct: 516  DITLKRLTSLERKKFVDEAKILSEEISKLNELLSSKELIFQLIQQEAADLKNKFSTPRRS 575

Query: 1813 LIEDSRSSQLDEINNIP 1863
            LI+DS S ++D+I+ IP
Sbjct: 576  LIDDSVSCEVDDIDIIP 592


>gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score =  709 bits (1830), Expect = 0.0
 Identities = 364/503 (72%), Positives = 409/503 (81%)
 Frame = +1

Query: 355  GAQEGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHK 534
            G  +G V+P EL KEA E+YMAYALSVL+GRALPDVRDGLKPVHRRIL+AMHELGLSS K
Sbjct: 77   GGGDGRVVPTELHKEATESYMAYALSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRK 136

Query: 535  PFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMR 714
            PFKKCARVVGEVLGKFHPHGDTAVY+SLVRMAQDFSLR PLI+GHGNFGSIDADPPAAMR
Sbjct: 137  PFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRFPLIQGHGNFGSIDADPPAAMR 196

Query: 715  YTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMAT 894
            YTECRLEAL EA+LL DL+ +TVDFVPNFD+S KEPSLLPAR+P LLLNG+SGIAVGMAT
Sbjct: 197  YTECRLEALTEAILLADLEQDTVDFVPNFDNSHKEPSLLPARLPTLLLNGTSGIAVGMAT 256

Query: 895  NIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSI 1074
            NIPPHNLGELVD L ALI+NPEA+LQELLEYMPGPDFPTGG+I+ N GILE YRTGRG I
Sbjct: 257  NIPPHNLGELVDVLCALIQNPEASLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRI 316

Query: 1075 MVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRS 1254
            +VRGK D+E+LD K KRSA+IIKEIPYQTNK +LVEKIAELVE+K L+GI DIRDESDRS
Sbjct: 317  VVRGKADIELLDSKTKRSAVIIKEIPYQTNKSSLVEKIAELVENKSLEGISDIRDESDRS 376

Query: 1255 GMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRS 1434
            GMR+VIELK+GSDPSIVLN LY+ T LQSSFSCNMVGILD QPK MGLKELLQ FL+FR 
Sbjct: 377  GMRVVIELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILDGQPKQMGLKELLQSFLDFRC 436

Query: 1435 SVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEK 1614
            SV+ERRAR+KLSQA  R+H                  +RE SSN  A A L   +NLS+K
Sbjct: 437  SVVERRARYKLSQAQDRRHIVEGIVVGLDNLDSVIDIIREASSNAAASAGLRNEFNLSDK 496

Query: 1615 QAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKF 1794
            QAEA++DI LR+L LLERKKF+ E +SL +QIS L                       KF
Sbjct: 497  QAEAILDINLRRLNLLERKKFVGESRSLMEQISKLTELLSSRKNILQLIEQEAIELKSKF 556

Query: 1795 GSPRRSLIEDSRSSQLDEINNIP 1863
             SPRRS++EDS   QL++I+ IP
Sbjct: 557  SSPRRSILEDSDGGQLEDIDVIP 579


>gb|AFW67221.1| hypothetical protein ZEAMMB73_149484 [Zea mays]
          Length = 932

 Score =  708 bits (1828), Expect = 0.0
 Identities = 355/497 (71%), Positives = 415/497 (83%)
 Frame = +1

Query: 373  VIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCA 552
            ++P EL KEA EAYM+YA+SVL+GRALPDVRDGLKPVHRRILYAMHE+GL+S +PF+KCA
Sbjct: 98   ILPVELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCA 157

Query: 553  RVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRL 732
            RVVGEVLGKFHPHGDTAVY SLVRMAQDFS+R PL++GHGNFGS+DADPPAAMRYTECRL
Sbjct: 158  RVVGEVLGKFHPHGDTAVYESLVRMAQDFSMRYPLVQGHGNFGSVDADPPAAMRYTECRL 217

Query: 733  EALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHN 912
            ++LAEAM LTDL+LNTVDFVPNFD+SQKEPSLLP+R+P+LLLNGSSGIAVGMATNIPPHN
Sbjct: 218  DSLAEAMFLTDLELNTVDFVPNFDNSQKEPSLLPSRVPSLLLNGSSGIAVGMATNIPPHN 277

Query: 913  LGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKT 1092
            LGELVD LS +I N EATLQELLE MPGPDFPTGG IL N GILE Y++GRG I+VRGKT
Sbjct: 278  LGELVDVLSVIIENREATLQELLERMPGPDFPTGGTILGNQGILEAYKSGRGRIVVRGKT 337

Query: 1093 DVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVI 1272
            D+E +DEK+KR+AIIIKEIPYQTNK  LV+KIAELVE K+L+GI DIRDESDR+GMR+VI
Sbjct: 338  DIETIDEKSKRTAIIIKEIPYQTNKATLVQKIAELVEDKVLEGISDIRDESDRTGMRVVI 397

Query: 1273 ELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERR 1452
            ELK+ +DP++VLN LY+HT LQSSFSCNMV ILD QPKLMGLKE+LQ FL+FR SVIERR
Sbjct: 398  ELKRSADPAVVLNNLYRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFLDFRCSVIERR 457

Query: 1453 ARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALM 1632
            AR+KLSQAL RKH                  +RETS++T A  ALV  ++LSEKQAEAL+
Sbjct: 458  ARYKLSQALERKHIVEGIVIGLDNLDAVIQIIRETSNHTAATRALVNEFDLSEKQAEALL 517

Query: 1633 DIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRS 1812
            DI L+KLT LERKKF+DE K++S++IS LN                      KF +PRRS
Sbjct: 518  DITLKKLTSLERKKFVDEAKTMSEEISKLNELLSSKKLIFQLIQQEAADLKSKFSTPRRS 577

Query: 1813 LIEDSRSSQLDEINNIP 1863
            +I+DS SS++D+I+ IP
Sbjct: 578  VIDDSISSEVDDIDIIP 594


>gb|AFW67220.1| hypothetical protein ZEAMMB73_149484 [Zea mays]
          Length = 933

 Score =  708 bits (1828), Expect = 0.0
 Identities = 355/497 (71%), Positives = 415/497 (83%)
 Frame = +1

Query: 373  VIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCA 552
            ++P EL KEA EAYM+YA+SVL+GRALPDVRDGLKPVHRRILYAMHE+GL+S +PF+KCA
Sbjct: 98   ILPVELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCA 157

Query: 553  RVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRL 732
            RVVGEVLGKFHPHGDTAVY SLVRMAQDFS+R PL++GHGNFGS+DADPPAAMRYTECRL
Sbjct: 158  RVVGEVLGKFHPHGDTAVYESLVRMAQDFSMRYPLVQGHGNFGSVDADPPAAMRYTECRL 217

Query: 733  EALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHN 912
            ++LAEAM LTDL+LNTVDFVPNFD+SQKEPSLLP+R+P+LLLNGSSGIAVGMATNIPPHN
Sbjct: 218  DSLAEAMFLTDLELNTVDFVPNFDNSQKEPSLLPSRVPSLLLNGSSGIAVGMATNIPPHN 277

Query: 913  LGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKT 1092
            LGELVD LS +I N EATLQELLE MPGPDFPTGG IL N GILE Y++GRG I+VRGKT
Sbjct: 278  LGELVDVLSVIIENREATLQELLERMPGPDFPTGGTILGNQGILEAYKSGRGRIVVRGKT 337

Query: 1093 DVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVI 1272
            D+E +DEK+KR+AIIIKEIPYQTNK  LV+KIAELVE K+L+GI DIRDESDR+GMR+VI
Sbjct: 338  DIETIDEKSKRTAIIIKEIPYQTNKATLVQKIAELVEDKVLEGISDIRDESDRTGMRVVI 397

Query: 1273 ELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERR 1452
            ELK+ +DP++VLN LY+HT LQSSFSCNMV ILD QPKLMGLKE+LQ FL+FR SVIERR
Sbjct: 398  ELKRSADPAVVLNNLYRHTALQSSFSCNMVAILDGQPKLMGLKEILQAFLDFRCSVIERR 457

Query: 1453 ARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALM 1632
            AR+KLSQAL RKH                  +RETS++T A  ALV  ++LSEKQAEAL+
Sbjct: 458  ARYKLSQALERKHIVEGIVIGLDNLDAVIQIIRETSNHTAATRALVNEFDLSEKQAEALL 517

Query: 1633 DIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRS 1812
            DI L+KLT LERKKF+DE K++S++IS LN                      KF +PRRS
Sbjct: 518  DITLKKLTSLERKKFVDEAKTMSEEISKLNELLSSKKLIFQLIQQEAADLKSKFSTPRRS 577

Query: 1813 LIEDSRSSQLDEINNIP 1863
            +I+DS SS++D+I+ IP
Sbjct: 578  VIDDSISSEVDDIDIIP 594


>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X3 [Solanum tuberosum]
          Length = 957

 Score =  706 bits (1823), Expect = 0.0
 Identities = 390/642 (60%), Positives = 458/642 (71%), Gaps = 10/642 (1%)
 Frame = +1

Query: 109  SSSIFLSRC-RPLLLFPAISASLPSSRRVFVELHPLSAAST--LAVRRVSSKGSDREEES 279
            S+ I L RC      F AI +     RR   EL  LS+ +     VR VS++    EEE 
Sbjct: 21   STGIRLLRCYHHHFTFTAIPSRFSGLRRASSELRFLSSVTPPRKQVRPVSARRKVTEEEV 80

Query: 280  SITARLXXXXXXXXXXXXLMVEEHSGAQEG-------MVIPAELPKEAKEAYMAYALSVL 438
                              +++ +  G + G        ++  EL KEA EAYM+YA+SVL
Sbjct: 81   GDEGN-----------GSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVL 129

Query: 439  VGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSL 618
            +GRALPDVRDGLKPVHRRILYAMHELGLSS KP+KKCARVVGEVLGKFHPHGD AVY+SL
Sbjct: 130  LGRALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSL 189

Query: 619  VRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPN 798
            VRMAQDFSLR PLIRGHGNFGSIDADPPAAMRYTECRLEAL EAMLL DL+ NTVDFVPN
Sbjct: 190  VRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPN 249

Query: 799  FDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQEL 978
            FD+SQKEPSLLPARIPNLLLNG+SGIAVGMATNIPPHNLGELVDALSALI NPEATLQEL
Sbjct: 250  FDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQEL 309

Query: 979  LEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQ 1158
            LEYMPGPDFPTGGII+ N GILE YRTGRG +++RGKTD+E+LD K KR+AIII+EIPYQ
Sbjct: 310  LEYMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQ 369

Query: 1159 TNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQ 1338
            TNK +LVEKIA+LVE+K L+G+ DIRDESDRSGMR+VIELK+GSDP+IVLN LY+ T LQ
Sbjct: 370  TNKASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQ 429

Query: 1339 SSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXX 1518
            SSFSCNMVGIL+ QPKLMGLKELLQ FL+FR SV+ERRA++KLSQA  R H         
Sbjct: 430  SSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVEGIIIGL 489

Query: 1519 XXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSL 1698
                     +R+ SS+ LA A L K + L+EKQAEA++DI+LR+LT LER KF+DE KSL
Sbjct: 490  DNLDEVIKTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSL 549

Query: 1699 SKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIPKRCKK 1878
              QIS L                       K+ +PRRS +ED+ S  L++I+ IP     
Sbjct: 550  RAQISKLEELLSSKKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIP----- 604

Query: 1879 VGNQVTKGEIARPQRPRRTRPKAITREVNRSIRASM*RTRCN 2004
              N+     I+     +R +P     +   +I  S+ + R N
Sbjct: 605  --NEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVN 644


>ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 953

 Score =  704 bits (1817), Expect = 0.0
 Identities = 389/638 (60%), Positives = 457/638 (71%), Gaps = 6/638 (0%)
 Frame = +1

Query: 109  SSSIFLSRC-RPLLLFPAISASLPSSRRVFVELHPLSAA--STLAVRRVSSKGSDREEES 279
            S+ I L RC      F AI +     R+   EL  LS+   S   VR VS++    EEE 
Sbjct: 21   STGIRLLRCYHHQFTFTAIPSRFSGLRKASSELRFLSSVTPSRKHVRPVSARRKVTEEEV 80

Query: 280  SITARLXXXXXXXXXXXXLMVEEHSGAQEG---MVIPAELPKEAKEAYMAYALSVLVGRA 450
                              +++ +  G + G    ++  EL KEA EAYM+YA+SVL+GRA
Sbjct: 81   GEEGN-----------GSVVLRDRDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRA 129

Query: 451  LPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMA 630
            LPDVRDGLKPVHRRILYAMHELGLSS KP+KK ARVVGEVLGKFHPHGD AVY+SLVRMA
Sbjct: 130  LPDVRDGLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMA 189

Query: 631  QDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSS 810
            QDFSLR PLIRGHGNFGSIDADPPAAMRYTECRLEAL EAMLL DL+ NTVDFVPNFD+S
Sbjct: 190  QDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNS 249

Query: 811  QKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEYM 990
            QKEPSLLPARIPNLLLNG+SGIAVGMATNIPPHNLGELVDALSALI NPEATLQELLEYM
Sbjct: 250  QKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYM 309

Query: 991  PGPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKP 1170
            PGPDFPTGGII+ N GILE YRTGRG +++RGKTD+E+LD K KR+AIII+EIPYQTNK 
Sbjct: 310  PGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKA 369

Query: 1171 ALVEKIAELVEHKILDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFS 1350
            +LVEKIA+LVE+K L+G+ DIRDESDRSGMR+VIELK+GSDP+IVLN LY+ T LQSSFS
Sbjct: 370  SLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTPLQSSFS 429

Query: 1351 CNMVGILDAQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXX 1530
            CNMVGIL+ QPKLMGLKELLQ FL+FR SV+ERRA++KLSQA  R H             
Sbjct: 430  CNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLDNLD 489

Query: 1531 XXXXXVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQI 1710
                 +R+ SS+ LA A L K + L+EKQAEA++DI+LR+LT LER KF+DE KSL  QI
Sbjct: 490  EVINTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRTQI 549

Query: 1711 SYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIPKRCKKVGNQ 1890
            S L                       K+ +PRRS +ED+ S  L++I+ IP       N+
Sbjct: 550  SKLEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIP-------NE 602

Query: 1891 VTKGEIARPQRPRRTRPKAITREVNRSIRASM*RTRCN 2004
                 I+     +R +P     +   +I  S+ + R N
Sbjct: 603  EMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVN 640


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score =  704 bits (1817), Expect = 0.0
 Identities = 360/508 (70%), Positives = 415/508 (81%)
 Frame = +1

Query: 340  VEEHSGAQEGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELG 519
            V++  G  +G ++   L KEA +AYMAYA+SVL+GRALPDVRDGLKPVHRRIL+AMHELG
Sbjct: 78   VKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELG 137

Query: 520  LSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADP 699
            LSS KPFKKCARVVGEVLGKFHPHGD AVY+SLVRMAQDFSLR PLI+GHGNFGSIDADP
Sbjct: 138  LSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADP 197

Query: 700  PAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIA 879
            PAAMRYTECRLEAL+EAMLL+DL++NTVDFVPNFD+SQKEPSLLPAR+P LLLNGSSGIA
Sbjct: 198  PAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIA 257

Query: 880  VGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRT 1059
            VGMATNIPPHNLGE+VDAL  LI NPEATLQELLEYMPGPDFPTGG+I+ N GILE YRT
Sbjct: 258  VGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNNGILEAYRT 317

Query: 1060 GRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRD 1239
            GRG I VRGKT+VE+LD K KR+A+IIKEIPYQTNK ALVE+IAELVE+K LDGI DIRD
Sbjct: 318  GRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVERIAELVENKTLDGISDIRD 377

Query: 1240 ESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVF 1419
            ESDR+GMRIVIELK+G+DPSIV N LY+ T+LQSSFSCNMVGI++ QPKLMGLKELLQ F
Sbjct: 378  ESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIINGQPKLMGLKELLQAF 437

Query: 1420 LEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGY 1599
            L+FR SV+ERRARFKL  A  R+H                  +RE SS+++A A+L   +
Sbjct: 438  LDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRLIREASSHSIASASLRTQF 497

Query: 1600 NLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXX 1779
            NLSEKQAEA++DI LR+LT LERKKF+DE KSL + IS L                    
Sbjct: 498  NLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLEELLSSRNNILQLIEQEATE 557

Query: 1780 XXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
               KF +PRRS++ED+ S Q+++I+ IP
Sbjct: 558  LKDKFPNPRRSVLEDTDSGQVEDIDVIP 585


>ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 935

 Score =  702 bits (1813), Expect = 0.0
 Identities = 360/500 (72%), Positives = 407/500 (81%)
 Frame = +1

Query: 364  EGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFK 543
            EG V+P EL KEA EAYMAYA+SVL+GRALPDVRDGLKPVHRRIL+AMHELGLSS KPFK
Sbjct: 88   EGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFK 147

Query: 544  KCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTE 723
            KCARVVGEVLGKFHPHGDTAVY+SLVRMAQDFSLR PLI+GHGNFGSIDADPPAAMRYTE
Sbjct: 148  KCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTE 207

Query: 724  CRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIP 903
            CRL+ L EAMLLTDL+ +TVDFVPNFD+SQKEPSLLPAR+P LLLNGSSGIAVGMATNIP
Sbjct: 208  CRLDDLTEAMLLTDLEQDTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIP 267

Query: 904  PHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVR 1083
            PHNLGE+VD L  LI NPEATLQELLEYMPGPDFPTGG+I+ N GILE YRTGRG +++R
Sbjct: 268  PHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIIR 327

Query: 1084 GKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMR 1263
            GKTD+E+LD K KR+AIIIKEIPYQTNK  LVEKIAELVE+K LDGI DIRDESDRSGMR
Sbjct: 328  GKTDIELLDSKTKRTAIIIKEIPYQTNKATLVEKIAELVENKSLDGISDIRDESDRSGMR 387

Query: 1264 IVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVI 1443
            IVIELK+GSDP IVLN LY+ T+LQS+FSCNMVGIL+ QPK MGLKELLQ FL+FR SV+
Sbjct: 388  IVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVV 447

Query: 1444 ERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAE 1623
            ERRARFKLSQA  R+H                  +RE SSN+ A A L   ++LSEKQAE
Sbjct: 448  ERRARFKLSQAQERRHIVEGILIGFDNLDGVIRIIREASSNSAAAAGLRNAFSLSEKQAE 507

Query: 1624 ALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSP 1803
            AL+DI+LR+L+L E   F+ E KSL +QIS L                       KF +P
Sbjct: 508  ALLDISLRRLSLRESGNFVAESKSLMEQISKLEELLSSRKNILELIEQEAIELKSKFSNP 567

Query: 1804 RRSLIEDSRSSQLDEINNIP 1863
            RRS++ED+ + QL++I+ IP
Sbjct: 568  RRSMLEDTDNGQLEDIDVIP 587


>ref|XP_004165810.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
            chloroplastic/mitochondrial-like, partial [Cucumis
            sativus]
          Length = 799

 Score =  701 bits (1810), Expect = 0.0
 Identities = 359/508 (70%), Positives = 414/508 (81%)
 Frame = +1

Query: 340  VEEHSGAQEGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELG 519
            V++  G  +G ++   L KEA +AYMAYA+SVL+GRALPDVRDGLKPVHRRIL+AMHELG
Sbjct: 78   VKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELG 137

Query: 520  LSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADP 699
            LSS KPFKKCARVVGEVLGKFHPHGD AVY+SLVRMAQDFSLR PLI+GH NFGSIDADP
Sbjct: 138  LSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIQGHXNFGSIDADP 197

Query: 700  PAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIA 879
            PAAMRYTECRLEAL+EAMLL+DL++NTVDFVPNFD+SQKEPSLLPAR+P LLLNGSSGIA
Sbjct: 198  PAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIA 257

Query: 880  VGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRT 1059
            VGMATNIPPHNLGE+VDAL  LI NPEATLQELLEYMPGPDFPTGG+I+ N GILE YRT
Sbjct: 258  VGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGGLIMGNNGILEAYRT 317

Query: 1060 GRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRD 1239
            GRG I VRGKT+VE+LD K KR+A+IIKEIPYQTNK ALVE+IAELVE+K LDGI DIRD
Sbjct: 318  GRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVERIAELVENKTLDGISDIRD 377

Query: 1240 ESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVF 1419
            ESDR+GMRIVIELK+G+DPSIV N LY+ T+LQSSFSCNMVGI++ QPKLMGLKELLQ F
Sbjct: 378  ESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIINGQPKLMGLKELLQAF 437

Query: 1420 LEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGY 1599
            L+FR SV+ERRARFKL  A  R+H                  +RE SS+++A A+L   +
Sbjct: 438  LDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRLIREASSHSIASASLRTQF 497

Query: 1600 NLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXX 1779
            NLSEKQAEA++DI LR+LT LERKKF+DE KSL + IS L                    
Sbjct: 498  NLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLEELLSSRNNILQLIEQEATE 557

Query: 1780 XXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
               KF +PRRS++ED+ S Q+++I+ IP
Sbjct: 558  LKDKFPNPRRSVLEDTDSGQVEDIDVIP 585


>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 939

 Score =  700 bits (1807), Expect = 0.0
 Identities = 361/497 (72%), Positives = 405/497 (81%)
 Frame = +1

Query: 373  VIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCA 552
            ++  EL KEA +AYMAYA+SVL+GRALPD+RDGLKPVHRRILYAMHEL LSS KPF KCA
Sbjct: 92   IVRVELHKEATDAYMAYAMSVLLGRALPDIRDGLKPVHRRILYAMHELRLSSRKPFVKCA 151

Query: 553  RVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRL 732
            RVVGEVLGKFHPHGDTAVY+SLVRMAQDFSLR PLI GHGNFGSIDADP AAMRYTECRL
Sbjct: 152  RVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLINGHGNFGSIDADPAAAMRYTECRL 211

Query: 733  EALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHN 912
            EAL EAMLL+DL+ +TVDFVPNFD+SQKEPSLLPAR+PNLLLNGSSGIAVGMATNIPPHN
Sbjct: 212  EALTEAMLLSDLEQDTVDFVPNFDNSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHN 271

Query: 913  LGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKT 1092
            LGELVD LS LI NPEATLQELLEYMPGPDFPTGG+I+ N GILE YRTGRG I+VRGKT
Sbjct: 272  LGELVDVLSVLIHNPEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVRGKT 331

Query: 1093 DVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVI 1272
            D+E LD K KRSAIIIKEIPYQTNK ALVEKIA+LVE+KILDGI DIRDESDR+GMR+VI
Sbjct: 332  DIESLDSKGKRSAIIIKEIPYQTNKAALVEKIAQLVENKILDGISDIRDESDRTGMRVVI 391

Query: 1273 ELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERR 1452
            ELK+GSDPSIVLN LY+ T+LQSSFSCNMVGIL+ QPKLMGLKELLQ FL+FR SVIERR
Sbjct: 392  ELKRGSDPSIVLNNLYRLTSLQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERR 451

Query: 1453 ARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALM 1632
            A+FKLSQA  R+H                    E S+NT+A + L   +NLSEKQAEA++
Sbjct: 452  AKFKLSQAQDRRHIVEGIAVGLDNLQRVMRISLEASNNTIASSLLRNEFNLSEKQAEAIL 511

Query: 1633 DIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRS 1812
            D   R+L +LERKKF +E +SL +QIS L                      +KF +PRRS
Sbjct: 512  DFNFRRLNVLERKKFDNESESLKEQISKLEELLSSKKRILQVVEQEAIDIKNKFANPRRS 571

Query: 1813 LIEDSRSSQLDEINNIP 1863
            ++EDS   QLD+I+ IP
Sbjct: 572  MLEDSDGGQLDDIDVIP 588


>ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus trichocarpa]
            gi|550330577|gb|EEF01573.2| DNA gyrase subunit A family
            protein [Populus trichocarpa]
          Length = 948

 Score =  699 bits (1805), Expect = 0.0
 Identities = 373/567 (65%), Positives = 429/567 (75%), Gaps = 4/567 (0%)
 Frame = +1

Query: 175  PSSRRVFVELHPLSAASTLAVRRVSSKGSDREEESSITARLXXXXXXXXXXXXLMVEEHS 354
            P SRR F  LH  S +      R SS  S R      + R             L+V++ +
Sbjct: 34   PPSRRYFSFLHHRSVSDL----RFSSS-SPRIRPVVQSRRREEPATDDSENGSLLVKDPN 88

Query: 355  GAQ----EGMVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGL 522
            G       G V+  EL KEA EAYMAYA+SVL+GRALPDVRDGLKPVHRRIL+AMHELGL
Sbjct: 89   GGSPGGGNGRVVQTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGL 148

Query: 523  SSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPP 702
            SS KPFKKCARVVGEVLGKFHPHGDTAVY++LVRMAQDFSLRCPLI+GHGNFGS+DADPP
Sbjct: 149  SSKKPFKKCARVVGEVLGKFHPHGDTAVYDALVRMAQDFSLRCPLIQGHGNFGSVDADPP 208

Query: 703  AAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAV 882
            AAMRYTECRL+ L EA+ L DL+ +TVDFVPNFD+SQKEPSL P R+P LLLNGSSGIAV
Sbjct: 209  AAMRYTECRLDGLTEAVFLADLEQDTVDFVPNFDNSQKEPSLFPTRLPTLLLNGSSGIAV 268

Query: 883  GMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILENFGILETYRTG 1062
            GMAT IPPHNLGELVD L ALI NPEATLQELLEYMPGPDFPTGGII+ N GIL+ YR+G
Sbjct: 269  GMATKIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDFPTGGIIMGNQGILDAYRSG 328

Query: 1063 RGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDE 1242
            +G I+VRGKTDVE+LD K KR+A+IIKEIPYQTNK +LVEKIAELVE K LDGI DIRDE
Sbjct: 329  QGRIVVRGKTDVELLDSKTKRNAVIIKEIPYQTNKASLVEKIAELVEDKNLDGISDIRDE 388

Query: 1243 SDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFL 1422
            SDRSGMRIVIELK+G+DPSIVLN LY+ T LQSSFSCNMVGILD QPK MGLKELLQ FL
Sbjct: 389  SDRSGMRIVIELKRGADPSIVLNNLYRLTPLQSSFSCNMVGILDGQPKQMGLKELLQAFL 448

Query: 1423 EFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYN 1602
            +FR SV+ERRA FKLS+A  R+H                  +R+ SSN +A A L   ++
Sbjct: 449  DFRCSVVERRAMFKLSEAQKRRHIVEGVMAGLDNLDRVVDIIRKASSNAIASADLRNEFS 508

Query: 1603 LSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXX 1782
            LSEKQAEA++DI+LR+LTLLE KKF++E KSL +QI+ L                     
Sbjct: 509  LSEKQAEAILDISLRRLTLLEGKKFVEESKSLMEQITKLEELLSSRGNILQLIEQEAVEL 568

Query: 1783 XHKFGSPRRSLIEDSRSSQLDEINNIP 1863
             +KF +PRRS++EDS S QL++I+ IP
Sbjct: 569  KNKFSNPRRSMLEDSDSGQLEDIDVIP 595


>ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 942

 Score =  699 bits (1805), Expect = 0.0
 Identities = 376/595 (63%), Positives = 443/595 (74%), Gaps = 10/595 (1%)
 Frame = +1

Query: 109  SSSIFLSRCRPLLLFPAISASLPSS--RRVFVELHPLSAAS----TLAVRRVSSKGSDRE 270
            S+  F S  R L L P        S  RR   EL  LSA++    +++V+  S +  + E
Sbjct: 12   STMSFSSAFRLLTLSPFTPTITRFSFFRRTSSELRFLSASTRRRPSISVKASSGRRDEPE 71

Query: 271  EESSITARLXXXXXXXXXXXXLMVEEHSGA----QEGMVIPAELPKEAKEAYMAYALSVL 438
            ++ +    L             +++ + G      EG ++  EL KEA EAYM+YA+SVL
Sbjct: 72   QDGNGNGSLA------------VIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVL 119

Query: 439  VGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSL 618
            +GRALPDVRDGLKPVHRRIL+AMHELGLSS KPFKKCARVVGEVLGKFHPHGD+AVY+S+
Sbjct: 120  LGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSM 179

Query: 619  VRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPN 798
            VRMAQDFSLR PL+ GHGNFGSIDADPPAAMRYTECRLE LAEAMLL DLD +TVDF PN
Sbjct: 180  VRMAQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPN 239

Query: 799  FDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQEL 978
            FD+SQKEPS+LPAR+P LLLNGSSGIAVGMATNIPPHNLGE+VD L  +I NPEATLQEL
Sbjct: 240  FDNSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATLQEL 299

Query: 979  LEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQ 1158
            LEYMPGPDFPTGG+I+ N GILE YRTGRG ++VRGKTD+E+LD K KR+AIIIKEIPYQ
Sbjct: 300  LEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIPYQ 359

Query: 1159 TNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQ 1338
            TNK ALVEKIAELVE+K L+GI DIRDESDRSGMRIVIELK+GSDP IVLN LY+ T+LQ
Sbjct: 360  TNKAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQ 419

Query: 1339 SSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXX 1518
            S+FSCNMVGIL+ QPK MGLKELLQ FL+FR SV+ERRARF+LS+A  R+H         
Sbjct: 420  STFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILVGF 479

Query: 1519 XXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSL 1698
                     +RE SSNT+A A L   +NLSEKQAEAL+D++LR+LTL E   F+ E KSL
Sbjct: 480  NNLDRVIRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENKSL 539

Query: 1699 SKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
             +QIS L                      +KF SPRRS++ED+ + QLD+I+ IP
Sbjct: 540  VEQISKLEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIP 594


>gb|ESW25277.1| hypothetical protein PHAVU_003G022300g [Phaseolus vulgaris]
          Length = 942

 Score =  699 bits (1804), Expect = 0.0
 Identities = 374/590 (63%), Positives = 435/590 (73%), Gaps = 6/590 (1%)
 Frame = +1

Query: 112  SSIFLSRCRPLLLFPAISASL----PSSRRVFVELHPLSAASTLAVRRVSSKGSDR--EE 273
            S  F S  R L L P +  S     PS  R+     P   ++  + R  ++  + R  +E
Sbjct: 21   SMAFSSALRVLRLSPFLQPSRLRLSPSHPRLLSPFQPRLISARASRRPAAAVKAVRRSDE 80

Query: 274  ESSITARLXXXXXXXXXXXXLMVEEHSGAQEGMVIPAELPKEAKEAYMAYALSVLVGRAL 453
              S+TA                  +     EG V+P EL KEA EAYMAYA+SVL+GRAL
Sbjct: 81   NGSVTA----------------TADSGNGSEGRVVPTELHKEATEAYMAYAMSVLLGRAL 124

Query: 454  PDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQ 633
            PDVRDGLKPVHRRIL+AMHELGLSS KPFKKCARVVGEVLGKFHPHGDTAVY+SLVRMAQ
Sbjct: 125  PDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ 184

Query: 634  DFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQ 813
            DFSLR PLI+GHGNFGSIDADPPAAMRYTECRL+ L EAMLL DL+ +TVDFVPNFD+SQ
Sbjct: 185  DFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLADLEQDTVDFVPNFDNSQ 244

Query: 814  KEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMP 993
            KEPSLLPAR+P LLLNGSSGIAVGMATNIPPHNLGE+VD L  LI NPEATLQELLEYMP
Sbjct: 245  KEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATLQELLEYMP 304

Query: 994  GPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPA 1173
            GPDFPTGG+I+ N GIL+ YRTGRG +++RGKTD+E+LD K KR+AIIIKEIPYQTNK +
Sbjct: 305  GPDFPTGGLIMGNLGILDAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEIPYQTNKAS 364

Query: 1174 LVEKIAELVEHKILDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSC 1353
            LVEKIAE+VE+K LDGI DIRDESDRSGMRIVIELK+GSDP IVLN LY+ T+LQS+FSC
Sbjct: 365  LVEKIAEVVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSC 424

Query: 1354 NMVGILDAQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXX 1533
            NMVGIL+ QPK MGLKELLQ FL+FR SV+ERRA FKLSQA  RKH              
Sbjct: 425  NMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSQARGRKHIVEGILIGFDNLDE 484

Query: 1534 XXXXVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQIS 1713
                +RE SSN+ A   L   ++LSEKQAEAL+D++LR+LTL E   F+ E KSL +QIS
Sbjct: 485  VIRIIREASSNSAAAVGLRNAFSLSEKQAEALLDMSLRRLTLRESGNFVAESKSLMEQIS 544

Query: 1714 YLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
             L                      +KF +PRRS++ED+ + QL++I+ IP
Sbjct: 545  KLEELLSSRKNILELIEQEAIELKNKFANPRRSMLEDTDNGQLEDIDVIP 594


>ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 944

 Score =  694 bits (1792), Expect = 0.0
 Identities = 376/597 (62%), Positives = 443/597 (74%), Gaps = 12/597 (2%)
 Frame = +1

Query: 109  SSSIFLSRCRPLLLFPAISASLPSS--RRVFVELHPLSAAS----TLAVRRVSSKGSDRE 270
            S+  F S  R L L P        S  RR   EL  LSA++    +++V+  S +  + E
Sbjct: 12   STMSFSSAFRLLTLSPFTPTITRFSFFRRTSSELRFLSASTRRRPSISVKASSGRRDEPE 71

Query: 271  EESSITARLXXXXXXXXXXXXLMVEEHSGA----QEGMVIPAELPKEAKEAYMAYALSVL 438
            ++ +    L             +++ + G      EG ++  EL KEA EAYM+YA+SVL
Sbjct: 72   QDGNGNGSLA------------VIDGNGGGGDKRNEGRIVLTELHKEATEAYMSYAMSVL 119

Query: 439  VGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSL 618
            +GRALPDVRDGLKPVHRRIL+AMHELGLSS KPFKKCARVVGEVLGKFHPHGD+AVY+S+
Sbjct: 120  LGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDSAVYDSM 179

Query: 619  VRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPN 798
            VRMAQDFSLR PL+ GHGNFGSIDADPPAAMRYTECRLE LAEAMLL DLD +TVDF PN
Sbjct: 180  VRMAQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDTVDFAPN 239

Query: 799  FDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEAT--LQ 972
            FD+SQKEPS+LPAR+P LLLNGSSGIAVGMATNIPPHNLGE+VD L  +I NPEAT  LQ
Sbjct: 240  FDNSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPEATVSLQ 299

Query: 973  ELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIP 1152
            ELLEYMPGPDFPTGG+I+ N GILE YRTGRG ++VRGKTD+E+LD K KR+AIIIKEIP
Sbjct: 300  ELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIIIKEIP 359

Query: 1153 YQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTT 1332
            YQTNK ALVEKIAELVE+K L+GI DIRDESDRSGMRIVIELK+GSDP IVLN LY+ T+
Sbjct: 360  YQTNKAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTS 419

Query: 1333 LQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXX 1512
            LQS+FSCNMVGIL+ QPK MGLKELLQ FL+FR SV+ERRARF+LS+A  R+H       
Sbjct: 420  LQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVEGILV 479

Query: 1513 XXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEK 1692
                       +RE SSNT+A A L   +NLSEKQAEAL+D++LR+LTL E   F+ E K
Sbjct: 480  GFNNLDRVIRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFVAENK 539

Query: 1693 SLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
            SL +QIS L                      +KF SPRRS++ED+ + QLD+I+ IP
Sbjct: 540  SLVEQISKLEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVIP 596


>ref|XP_004981303.1| PREDICTED: probable DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Setaria italica]
          Length = 821

 Score =  691 bits (1784), Expect = 0.0
 Identities = 350/483 (72%), Positives = 404/483 (83%)
 Frame = +1

Query: 415  MAYALSVLVGRALPDVRDGLKPVHRRILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHG 594
            MAYA+SVL+GRALPDVRDGLKPVHRRILYAMHE+GL+S +PF+KCARVVGEVLGKFHPHG
Sbjct: 1    MAYAMSVLLGRALPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCARVVGEVLGKFHPHG 60

Query: 595  DTAVYNSLVRMAQDFSLRCPLIRGHGNFGSIDADPPAAMRYTECRLEALAEAMLLTDLDL 774
            DTAVY++LVRMAQDFS+R PL++GHGNFGSIDADPPAAMRYTECRL+ LAEAM LTDL+L
Sbjct: 61   DTAVYDALVRMAQDFSMRYPLVQGHGNFGSIDADPPAAMRYTECRLDPLAEAMFLTDLEL 120

Query: 775  NTVDFVPNFDSSQKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALSALIRN 954
            NTVDFVPNFD+SQKEPSLLP R+P+LLLNGSSGIAVGMATNIPPHNLGELVDALS +I+N
Sbjct: 121  NTVDFVPNFDNSQKEPSLLPTRVPSLLLNGSSGIAVGMATNIPPHNLGELVDALSVMIQN 180

Query: 955  PEATLQELLEYMPGPDFPTGGIILENFGILETYRTGRGSIMVRGKTDVEILDEKAKRSAI 1134
            PEATLQELLE MPGPDFPTGG IL + GILE Y++GRG I+VRGKTD+EI+D+K KR AI
Sbjct: 181  PEATLQELLECMPGPDFPTGGTILGHQGILEAYKSGRGRIVVRGKTDIEIIDQKTKREAI 240

Query: 1135 IIKEIPYQTNKPALVEKIAELVEHKILDGICDIRDESDRSGMRIVIELKKGSDPSIVLNK 1314
            IIKEIPYQ NK  LVEKIAELVE K+L+GI DIRDESDR+GMR+VIELK+ +DP+IVLN 
Sbjct: 241  IIKEIPYQANKATLVEKIAELVEDKVLEGISDIRDESDRTGMRVVIELKRSADPAIVLNN 300

Query: 1315 LYQHTTLQSSFSCNMVGILDAQPKLMGLKELLQVFLEFRSSVIERRARFKLSQALVRKHX 1494
            LY+HT LQSSFSCNMV ILD QPKLMGL+E+LQ FL+FR SVIERRARFKLSQAL RKH 
Sbjct: 301  LYRHTALQSSFSCNMVAILDGQPKLMGLREILQAFLDFRCSVIERRARFKLSQALERKHI 360

Query: 1495 XXXXXXXXXXXXXXXXXVRETSSNTLAIAALVKGYNLSEKQAEALMDIALRKLTLLERKK 1674
                             +RETS++  A  ALVK ++LSEKQAEAL+DI LRKLT LERKK
Sbjct: 361  VEGIVVGLDNLDAVIQIIRETSNHAAATEALVKEFDLSEKQAEALLDITLRKLTSLERKK 420

Query: 1675 FMDEEKSLSKQISYLNXXXXXXXXXXXXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEIN 1854
            F+DE K+LS++IS LN                     +KF + RRSLI+DS +S++D+I+
Sbjct: 421  FVDEAKTLSEEISKLNELLSSKKLIFQLIQQEAADLKNKFSTLRRSLIDDSVNSEVDDID 480

Query: 1855 NIP 1863
             IP
Sbjct: 481  IIP 483


>gb|AAG51377.1|AC011560_9 putative DNA gyrase subunit A; 1114-7603 [Arabidopsis thaliana]
          Length = 917

 Score =  688 bits (1776), Expect = 0.0
 Identities = 350/517 (67%), Positives = 409/517 (79%), Gaps = 9/517 (1%)
 Frame = +1

Query: 340  VEEHSGAQEG---------MVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRR 492
            V+E SGA  G          ++P EL KEA E+YM+YALSVL+GRALPDVRDGLKPVHRR
Sbjct: 81   VKEESGANNGGLVVSGDESRIVPFELHKEATESYMSYALSVLLGRALPDVRDGLKPVHRR 140

Query: 493  ILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHG 672
            IL+AMHELG+SS KP+KKCARVVGEVLGKFHPHGDTAVY+SLVRMAQ FSLRCPLI+GHG
Sbjct: 141  ILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRCPLIQGHG 200

Query: 673  NFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNL 852
            NFGSIDADPPAAMRYTECRL+ LAEA+LL+DLD +TVDFV NFD+SQKEP++LPAR+P L
Sbjct: 201  NFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAVLPARLPAL 260

Query: 853  LLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILEN 1032
            LLNG+SGIAVGMATNIPPHNLGELVD L ALI NPEATLQELLEYMP PDFPTGGII+ N
Sbjct: 261  LLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIMGN 320

Query: 1033 FGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKI 1212
             G+L+ YRTGRG ++VRGK +VE+LD K KR+A+II EIPYQTNK  LV+KIAELVE+K 
Sbjct: 321  LGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVENKT 380

Query: 1213 LDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLM 1392
            L+GI DIRDESDR+GMR+VIELK+G DP++VLN LY+HT LQSSFSCNMVGI D +PKLM
Sbjct: 381  LEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGICDGEPKLM 440

Query: 1393 GLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTL 1572
            GLKELLQ F++FR SV+ERRARFKLS A  RKH                  + + SS++ 
Sbjct: 441  GLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIELITKASSHSS 500

Query: 1573 AIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXX 1752
            A AAL   Y LSEKQAEA+++I LR+LT LERKKF DE  SL++QI+ L           
Sbjct: 501  ATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQLLSTRTNIL 560

Query: 1753 XXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
                        +F SPRRS++EDS S  L++I+ IP
Sbjct: 561  KLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIP 597


>ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana]
            gi|110808536|sp|Q9CAF6.2|GYRA_ARATH RecName:
            Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
            gi|332641422|gb|AEE74943.1| DNA gyrase subunit A
            [Arabidopsis thaliana]
          Length = 950

 Score =  688 bits (1776), Expect = 0.0
 Identities = 350/517 (67%), Positives = 409/517 (79%), Gaps = 9/517 (1%)
 Frame = +1

Query: 340  VEEHSGAQEG---------MVIPAELPKEAKEAYMAYALSVLVGRALPDVRDGLKPVHRR 492
            V+E SGA  G          ++P EL KEA E+YM+YALSVL+GRALPDVRDGLKPVHRR
Sbjct: 81   VKEESGANNGGLVVSGDESRIVPFELHKEATESYMSYALSVLLGRALPDVRDGLKPVHRR 140

Query: 493  ILYAMHELGLSSHKPFKKCARVVGEVLGKFHPHGDTAVYNSLVRMAQDFSLRCPLIRGHG 672
            IL+AMHELG+SS KP+KKCARVVGEVLGKFHPHGDTAVY+SLVRMAQ FSLRCPLI+GHG
Sbjct: 141  ILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRCPLIQGHG 200

Query: 673  NFGSIDADPPAAMRYTECRLEALAEAMLLTDLDLNTVDFVPNFDSSQKEPSLLPARIPNL 852
            NFGSIDADPPAAMRYTECRL+ LAEA+LL+DLD +TVDFV NFD+SQKEP++LPAR+P L
Sbjct: 201  NFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAVLPARLPAL 260

Query: 853  LLNGSSGIAVGMATNIPPHNLGELVDALSALIRNPEATLQELLEYMPGPDFPTGGIILEN 1032
            LLNG+SGIAVGMATNIPPHNLGELVD L ALI NPEATLQELLEYMP PDFPTGGII+ N
Sbjct: 261  LLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIMGN 320

Query: 1033 FGILETYRTGRGSIMVRGKTDVEILDEKAKRSAIIIKEIPYQTNKPALVEKIAELVEHKI 1212
             G+L+ YRTGRG ++VRGK +VE+LD K KR+A+II EIPYQTNK  LV+KIAELVE+K 
Sbjct: 321  LGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVENKT 380

Query: 1213 LDGICDIRDESDRSGMRIVIELKKGSDPSIVLNKLYQHTTLQSSFSCNMVGILDAQPKLM 1392
            L+GI DIRDESDR+GMR+VIELK+G DP++VLN LY+HT LQSSFSCNMVGI D +PKLM
Sbjct: 381  LEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGICDGEPKLM 440

Query: 1393 GLKELLQVFLEFRSSVIERRARFKLSQALVRKHXXXXXXXXXXXXXXXXXXVRETSSNTL 1572
            GLKELLQ F++FR SV+ERRARFKLS A  RKH                  + + SS++ 
Sbjct: 441  GLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIELITKASSHSS 500

Query: 1573 AIAALVKGYNLSEKQAEALMDIALRKLTLLERKKFMDEEKSLSKQISYLNXXXXXXXXXX 1752
            A AAL   Y LSEKQAEA+++I LR+LT LERKKF DE  SL++QI+ L           
Sbjct: 501  ATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQLLSTRTNIL 560

Query: 1753 XXXXXXXXXXXHKFGSPRRSLIEDSRSSQLDEINNIP 1863
                        +F SPRRS++EDS S  L++I+ IP
Sbjct: 561  KLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIP 597