BLASTX nr result
ID: Zingiber24_contig00024304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00024304
(716 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citr... 306 4e-81
ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containi... 304 2e-80
gb|EMJ04907.1| hypothetical protein PRUPE_ppa019391mg, partial [... 300 4e-79
gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Moru... 297 2e-78
ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containi... 296 3e-78
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi... 293 3e-77
ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group] g... 293 4e-77
gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indi... 293 4e-77
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ... 292 6e-77
ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutr... 290 2e-76
gb|EOY31499.1| Tetratricopeptide repeat (TPR)-like superfamily p... 289 5e-76
ref|XP_006857035.1| hypothetical protein AMTR_s00065p00020910 [A... 287 3e-75
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,... 285 8e-75
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi... 285 1e-74
ref|XP_004975413.1| PREDICTED: pentatricopeptide repeat-containi... 283 4e-74
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar... 283 5e-74
emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|726998... 283 5e-74
gb|EMT06657.1| Pentatricopeptide repeat-containing protein [Aegi... 282 7e-74
ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Caps... 281 1e-73
ref|XP_006660637.1| PREDICTED: pentatricopeptide repeat-containi... 280 3e-73
>ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citrus clementina]
gi|557556791|gb|ESR66805.1| hypothetical protein
CICLE_v10007430mg [Citrus clementina]
Length = 851
Score = 306 bits (784), Expect = 4e-81
Identities = 148/237 (62%), Positives = 185/237 (78%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LY+K + +AEFAF MR+L L C AYS+MITI TRL LY K+E++IR++ E+K+
Sbjct: 196 LMGLYKKSWSVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKV 255
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENWLV LNAY QQGK EEAE VL SM E G PNI+AYNTLITGYG+V+NM A++
Sbjct: 256 VPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLITGYGKVSNMDASQR 315
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF ++K VGL PDETTYRSM+EG+GR NY EA WYY++LK LG+ PN+SN YTLINLQA
Sbjct: 316 LFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLQA 375
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KY D G TL+DM GCQ+SSI+ +LLQAYEKAGR ++VP+IL+ S YQ +L +
Sbjct: 376 KYEDEEGAVNTLDDMLKMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFN 432
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/136 (27%), Positives = 71/136 (52%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+SM+ + ++++R M E D + + ++ Y +QG E VL
Sbjct: 713 LEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLT 772
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E G+ P++ +YNTLI YG ++ A L + ++ G+ PD+ TY +M+ R D
Sbjct: 773 ELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRND 832
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 833 KFLEAIKWSLWMKQIG 848
Score = 61.6 bits (148), Expect = 2e-07
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Frame = +2
Query: 101 SMITICTRLRLYHKSEDIIRV-----MNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++IT+ L +Y K++ RV M ++ L D ++ + AY Q E + ++
Sbjct: 643 NIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQ 702
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
M G ++ AYN+++ YG+ M+ K++ + +K D TY M++ +G
Sbjct: 703 EMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 762
Query: 446 NYEEALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQ-----YS 610
E + +LK G P+ ++ TLI G V +++MR G + Y+
Sbjct: 763 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYT 822
Query: 611 SIVSSL 628
+++++L
Sbjct: 823 NMITAL 828
Score = 60.8 bits (146), Expect = 4e-07
Identities = 37/176 (21%), Positives = 79/176 (44%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ +Y K + F ++L L + +Y+++I + + ++ M +
Sbjct: 650 MLDIYGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGF 709
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY ++G+ E + VL+ M ET + YN +I YG +
Sbjct: 710 SVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVG 769
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LK GL PD +Y ++++ +G E+A+ ++++ G P+ + +I
Sbjct: 770 VLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 825
Score = 58.2 bits (139), Expect = 3e-06
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Frame = +2
Query: 116 CTRLRLYHKSEDIIRVMN-EEKILPDTENWLVRL-----NAYCQQGKTEEAEAVLKSMLE 277
C LR+Y + + ++ KIL W L N + +E V ML+
Sbjct: 578 CDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELYDCVINCCARALPIDELSRVFDEMLQ 637
Query: 278 TGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEE 457
G PNII N ++ YG+ K + LF K +GL D +Y +++ +G+ N E
Sbjct: 638 HGFTPNIITLNVMLDIYGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLES 696
Query: 458 ALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSIV-SSLLQ 634
++++ GF + + ++++ K G + L M+ C + + ++
Sbjct: 697 MSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 756
Query: 635 AYEKAGRIESVPQIL 679
Y + G I V +L
Sbjct: 757 IYGEQGWINEVVGVL 771
>ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Citrus sinensis]
Length = 915
Score = 304 bits (779), Expect = 2e-80
Identities = 147/237 (62%), Positives = 185/237 (78%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LY+K + +AEFAF MR+L L C AYS+MITI TRL LY K+E++IR++ E+K+
Sbjct: 260 LMGLYKKSWNVEEAEFAFNQMRKLGLVCESAYSAMITIYTRLSLYEKAEEVIRLIREDKV 319
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENWLV LNAY QQGK EEAE VL SM E G PNI+AYNTL+TGYG+V+NM+AA+
Sbjct: 320 VPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQR 379
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF ++K VGL PDETTYRSM+EG+GR NY EA WYY++LK LG+ PN+SN YTLINL A
Sbjct: 380 LFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHA 439
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KY D G TL+DM GCQ+SSI+ +LLQAYEKAGR ++VP+IL+ S YQ +L +
Sbjct: 440 KYEDEEGAVNTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLYQHVLFN 496
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/136 (27%), Positives = 71/136 (52%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+SM+ + ++++R M E D + + ++ Y +QG E VL
Sbjct: 777 LEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLT 836
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E G+ P++ +YNTLI YG ++ A L + ++ G+ PD+ TY +M+ R D
Sbjct: 837 ELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALRRND 896
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 897 KFLEAIKWSLWMKQIG 912
Score = 60.5 bits (145), Expect = 5e-07
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Frame = +2
Query: 101 SMITICTRLRLYHKSEDIIRV-----MNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++IT+ L ++ K++ RV M ++ L D ++ + AY Q E + ++
Sbjct: 707 NIITLNVMLDIFGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQ 766
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
M G ++ AYN+++ YG+ M+ K++ + +K D TY M++ +G
Sbjct: 767 EMQVDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQG 826
Query: 446 NYEEALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQ-----YS 610
E + +LK G P+ ++ TLI G V +++MR G + Y+
Sbjct: 827 WINEVVGVLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYT 886
Query: 611 SIVSSL 628
+++++L
Sbjct: 887 NMITAL 892
Score = 59.7 bits (143), Expect = 9e-07
Identities = 36/176 (20%), Positives = 79/176 (44%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ ++ K + F ++L L + +Y+++I + + ++ M +
Sbjct: 714 MLDIFGKAKLFKRVRKLFSMAKKLGLVDVISYNTIIAAYGQNKNLESMSSTVQEMQVDGF 773
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY ++G+ E + VL+ M ET + YN +I YG +
Sbjct: 774 SVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVG 833
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LK GL PD +Y ++++ +G E+A+ ++++ G P+ + +I
Sbjct: 834 VLTELKECGLRPDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMI 889
Score = 59.3 bits (142), Expect = 1e-06
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Frame = +2
Query: 116 CTRLRLYHKSEDIIRVMN-EEKILPDTENWLVRL-----NAYCQQGKTEEAEAVLKSMLE 277
C LR+Y + + ++ KIL W L N + T+E V ML+
Sbjct: 642 CDMLRIYQQCGMLDKLSYLYYKILKSGITWNQELFDCVINCCARALPTDELSRVFDEMLQ 701
Query: 278 TGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEE 457
G PNII N ++ +G+ K + LF K +GL D +Y +++ +G+ N E
Sbjct: 702 RGFTPNIITLNVMLDIFGKAKLFKRVRKLFSMAKKLGL-VDVISYNTIIAAYGQNKNLES 760
Query: 458 ALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSIV-SSLLQ 634
++++ GF + + ++++ K G + L M+ C + + ++
Sbjct: 761 MSSTVQEMQVDGFSVSLEAYNSMLDAYGKEGQMENFKNVLRRMKETSCTFDHYTYNIMID 820
Query: 635 AYEKAGRIESVPQIL 679
Y + G I V +L
Sbjct: 821 IYGEQGWINEVVGVL 835
>gb|EMJ04907.1| hypothetical protein PRUPE_ppa019391mg, partial [Prunus persica]
Length = 766
Score = 300 bits (767), Expect = 4e-79
Identities = 145/236 (61%), Positives = 180/236 (76%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEF F MR + C AYSSMITI TRL L+ K+E+II ++ E+++
Sbjct: 113 LMVLYQKGWNVEEAEFTFFQMRNFGILCQSAYSSMITIYTRLNLFEKAEEIIGLLKEDRV 172
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+ +NWLV +NAYCQQGK ++AE VL SM E G PNIIAYNTLITGYG+ + M AA H
Sbjct: 173 RLNLDNWLVMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTLITGYGKASKMDAADH 232
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LFQ +K+ GL PDETTYRSM+EG+GR DNY EA WYY++LK LG+ PNSSN YTLINLQA
Sbjct: 233 LFQGIKNAGLEPDETTYRSMIEGWGRADNYMEAEWYYKELKRLGYKPNSSNLYTLINLQA 292
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILL 709
K+ D G +TL+DM GCQYSSI+ +LLQAYEKAGR++ VP++L SFYQ IL+
Sbjct: 293 KHEDEEGAIRTLDDMLTMGCQYSSILGTLLQAYEKAGRVDKVPRLLRGSFYQHILV 348
Score = 79.0 bits (193), Expect = 1e-12
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKC-IKAYSSMITICTRLRLYHKSEDIIRVMNEEK 178
++A Y + L FG M+ ++AY++M+ + + +++ M E
Sbjct: 601 IIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFRSVLQRMKETS 660
Query: 179 ILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAK 358
D + + +N Y +QG +E VL + E G+ P++ +YNTLI YG ++ A
Sbjct: 661 CASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAV 720
Query: 359 HLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLG 493
HL + ++ G+ PD+ TY +++ + D Y EA+ + +K +G
Sbjct: 721 HLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKWSLWMKQMG 765
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/181 (22%), Positives = 79/181 (43%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ +Y K L +A F ++ L + +Y+++I R + M +
Sbjct: 567 MLDVYGKAKLLKKARKLFWMAQKWGLVDMISYNTIIAAYGRNKDLRNMSSTFGEMQFKGF 626
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY ++ + E +VL+ M ET + YN +I YG +
Sbjct: 627 SVSLEAYNTMLDAYGKESQMERFRSVLQRMKETSCASDHYTYNIMINIYGEQGWIDEVAD 686
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+ LK GL PD +Y ++++ +G E+A+ ++++ G P+ + LIN
Sbjct: 687 VLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAVHLVKEMRENGIQPDKITYINLINALR 746
Query: 542 K 544
K
Sbjct: 747 K 747
Score = 58.5 bits (140), Expect = 2e-06
Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
I + M+ I R K +D+ + + + D E + +N + +E +
Sbjct: 491 IYMFRDMLRIYQRCGRLDKLKDLYYKLLKSGVTWDQEMYNCVINCCSRALPVDEISEIFD 550
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
ML+ G PN I +N ++ YG+ +K A+ LF + GL D +Y +++ +GR
Sbjct: 551 EMLQCGFVPNTITFNVMLDVYGKAKLLKKARKLFWMAQKWGL-VDMISYNTIIAAYGRNK 609
Query: 446 NYEEALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSIV-S 622
+ + +++ GF + + T+++ K + L+ M+ C +
Sbjct: 610 DLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFRSVLQRMKETSCASDHYTYN 669
Query: 623 SLLQAYEKAGRIESVPQIL 679
++ Y + G I+ V +L
Sbjct: 670 IMINIYGEQGWIDEVADVL 688
>gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 889
Score = 297 bits (761), Expect = 2e-78
Identities = 144/237 (60%), Positives = 181/237 (76%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEF F MR L C AYS++ITI TRL LY K+E++I M E+++
Sbjct: 236 LMGLYQKSWNVEEAEFTFTRMRDLGTVCQSAYSALITIYTRLNLYEKAEEVIGFMREDEV 295
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ +N LV LNAY QQGK E+AE VL SM ++G PPNI+AYNTLITGYG+ + M AA+
Sbjct: 296 IPNLDNCLVMLNAYSQQGKLEDAEMVLASMQKSGFPPNIVAYNTLITGYGKASKMDAAQR 355
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF +++VGL P+ETTYRSM+EG+GR DNY+E +WYY+KLK LG+ PNSSN YTLINLQA
Sbjct: 356 LFTCIRNVGLEPNETTYRSMIEGWGRADNYKETIWYYQKLKKLGYKPNSSNLYTLINLQA 415
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KYGD G +TLEDM GCQY SI+ LLQAYE+AGRIE VP +L+ S YQ +LL+
Sbjct: 416 KYGDEDGAVRTLEDMLNIGCQYPSIIGILLQAYERAGRIEKVPLLLKGSLYQHVLLN 472
Score = 79.0 bits (193), Expect = 1e-12
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKC-IKAYSSMITICTRLRLYHKSEDIIRVMNEEK 178
L+A Y + L++ AF M+ ++AY+SM+ + R ++ M E
Sbjct: 724 LIAAYGRNKDLTKMSSAFKLMQFKGFSVSLEAYNSMLDAYGKERQMESFRSVLHKMKESN 783
Query: 179 ILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAK 358
D + + +N Y +QG +E VLK + E G P++ +YNTLI YG ++ A
Sbjct: 784 CASDHYTYNIMINIYGEQGWIDEVAEVLKDLKECGFRPDLYSYNTLIKAYGIAGMVEDAV 843
Query: 359 HLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLG 493
L + ++ G+ PD+ TY +++ R D + EA+ + +K +G
Sbjct: 844 GLVKEMRENGIEPDKVTYVNLITAMKRNDEFLEAVKWSLWMKQMG 888
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/176 (22%), Positives = 78/176 (44%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ LY K +A F + L + +Y+++I R + K ++M +
Sbjct: 690 LLDLYGKAKLFKKAMKLFWMAEKWGLVDVISYNTLIAAYGRNKDLTKMSSAFKLMQFKGF 749
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY ++ + E +VL M E+ + YN +I YG +
Sbjct: 750 SVSLEAYNSMLDAYGKERQMESFRSVLHKMKESNCASDHYTYNIMINIYGEQGWIDEVAE 809
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ ++LK G PD +Y ++++ +G E+A+ ++++ G P+ + LI
Sbjct: 810 VLKDLKECGFRPDLYSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKVTYVNLI 865
>ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 885
Score = 296 bits (759), Expect = 3e-78
Identities = 143/236 (60%), Positives = 179/236 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LMALYQK + +AEF F MR + C AYS+MITI TR+ LY ++E+II +M E+ +
Sbjct: 232 LMALYQKGWNVEEAEFTFSRMRNFGIVCQSAYSAMITIYTRMSLYERAEEIIGLMKEDGV 291
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ +NWLV +NAYCQQGK E AE + SM E G PNI+AYNTLITGYG+ + M AA H
Sbjct: 292 IPNLDNWLVVINAYCQQGKVEAAELGVVSMKEAGFSPNIVAYNTLITGYGKASKMDAAHH 351
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF +K VGL PDETTYRSM+EG+GRTDNY+EA WYY++LK LG+ PNSSN YTLINLQA
Sbjct: 352 LFLGIKKVGLEPDETTYRSMIEGWGRTDNYKEAYWYYKELKRLGYKPNSSNLYTLINLQA 411
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILL 709
K+ D G +TL+DM+ GCQYSSI+ LLQAYEKAGRI+ VP +L + YQ +L+
Sbjct: 412 KHEDEDGAIRTLDDMQKIGCQYSSILGILLQAYEKAGRIDKVPFLLRGALYQHVLV 467
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/136 (27%), Positives = 71/136 (52%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+SM+ + + +++ M E D + +N Y +QG +E VL
Sbjct: 749 LEAYNSMLDAYGKENQMEQFRSVLQRMKETSCGSDHHTYNTMINIYGEQGWIDEVAGVLT 808
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E G+ P++ +YNTLI YG ++ A +L + ++ G+ PD+ TY +++ + D
Sbjct: 809 ELKECGLGPDLCSYNTLIKAYGIAGMVEDAVYLLKEMRENGVEPDKITYINLIAALRKND 868
Query: 446 NYEEALWYYEKLKSLG 493
Y EA+ + +K +G
Sbjct: 869 EYLEAVKWSLWMKQMG 884
Score = 65.1 bits (157), Expect = 2e-08
Identities = 41/176 (23%), Positives = 81/176 (46%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ +Y K L +A F ++ L +Y+++I R + + +R M
Sbjct: 686 MLDVYGKAKLLKKARKLFLMAQKWDLVDTISYNTIIAAYGRNKDFKSMSSAVREMQLNGF 745
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY ++ + E+ +VL+ M ET + YNT+I YG +
Sbjct: 746 SVSLEAYNSMLDAYGKENQMEQFRSVLQRMKETSCGSDHHTYNTMINIYGEQGWIDEVAG 805
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LK GL PD +Y ++++ +G E+A++ ++++ G P+ + LI
Sbjct: 806 VLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAVYLLKEMRENGVEPDKITYINLI 861
Score = 61.2 bits (147), Expect = 3e-07
Identities = 44/201 (21%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Frame = +2
Query: 95 YSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSML 274
Y+ +I C+R + ++ M + +P+T + V L+ Y + ++A L M
Sbjct: 648 YNCVINCCSRALPIDEISEMFDQMLKRGFVPNTITFNVMLDVYGKAKLLKKARK-LFLMA 706
Query: 275 ETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYE 454
+ + I+YNT+I YGR + K+ + ++ G + Y SM++ +G+ + E
Sbjct: 707 QKWDLVDTISYNTIIAAYGRNKDFKSMSSAVREMQLNGFSVSLEAYNSMLDAYGKENQME 766
Query: 455 EALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAG-----CQYSSIV 619
+ +++K + + T+IN+ + G + L +++ G C Y
Sbjct: 767 QFRSVLQRMKETSCGSDHHTYNTMINIYGEQGWIDEVAGVLTELKECGLGPDLCSY---- 822
Query: 620 SSLLQAYEKAGRIESVPQILE 682
++L++AY AG +E +L+
Sbjct: 823 NTLIKAYGIAGMVEDAVYLLK 843
Score = 60.5 bits (145), Expect = 5e-07
Identities = 39/174 (22%), Positives = 79/174 (45%)
Frame = +2
Query: 95 YSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSML 274
++ M+ + + +L K+ + +M ++ L DT ++ + AY + + + ++ M
Sbjct: 683 FNVMLDVYGKAKLLKKARKLF-LMAQKWDLVDTISYNTIIAAYGRNKDFKSMSSAVREMQ 741
Query: 275 ETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYE 454
G ++ AYN+++ YG+ M+ + + Q +K D TY +M+ +G +
Sbjct: 742 LNGFSVSLEAYNSMLDAYGKENQMEQFRSVLQRMKETSCGSDHHTYNTMINIYGEQGWID 801
Query: 455 EALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSI 616
E +LK G P+ ++ TLI G V L++MR G + I
Sbjct: 802 EVAGVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAVYLLKEMRENGVEPDKI 855
Score = 57.4 bits (137), Expect = 5e-06
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEE---KILPDTENWLVRLNAYCQQGKTEEAEA 256
+ A++S+ + R + +E++I+ M E ++ N L+ A + G+ E
Sbjct: 155 VSAFNSVFRVLGRRENWDAAENLIQEMVTEFGCELNYQVFNTLIY--ACSKLGRVELGAK 212
Query: 257 VLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFG 436
MLE G+ PN+ + L+ Y + N++ A+ F +++ G+ ++ Y +M+ +
Sbjct: 213 WFAMMLEYGVQPNVATFGMLMALYQKGWNVEEAEFTFSRMRNFGI-VCQSAYSAMITIYT 271
Query: 437 RTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSI 616
R YE A +K G PN N+ +IN + G V + M+ AG + +
Sbjct: 272 RMSLYERAEEIIGLMKEDGVIPNLDNWLVVINAYCQQGKVEAAELGVVSMKEAGFSPNIV 331
Query: 617 V-SSLLQAYEKAGRIES 664
++L+ Y KA ++++
Sbjct: 332 AYNTLITGYGKASKMDA 348
>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product
[Vitis vinifera]
Length = 900
Score = 293 bits (751), Expect = 3e-77
Identities = 139/237 (58%), Positives = 184/237 (77%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
+M+LYQK ++ +E+AF MR + C AYS+MITI TR+ LY K+E++I + E+K+
Sbjct: 249 VMSLYQKGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKAEEVIDFIQEDKV 308
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+ + ENWLV LNAY QQGK +EAE VL SM G PNI+AYN LITGYG+ +NM AA+H
Sbjct: 309 ILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQH 368
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F+NLK+VGL PDE+TYRSM+EG+GR +NY+EA WYY +LK LGF PNSSN YT+INLQA
Sbjct: 369 IFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPNSSNLYTMINLQA 428
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KY D +TL+DM+ GCQYSS++ +LLQAYE+AGRI+ VP IL+ SFY+ +L++
Sbjct: 429 KYADGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPLILKGSFYEYVLVN 485
Score = 69.7 bits (169), Expect = 9e-10
Identities = 36/136 (26%), Positives = 68/136 (50%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++ Y+ M+ + ++R M E D + + +N Y +QG EE VL
Sbjct: 764 LEVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVANVLT 823
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E+G+ P++ +YNTLI YG ++ A L + ++ G+ PD TY +++ + D
Sbjct: 824 ELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLINALRKND 883
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 884 EFLEAVKWSLWMKQMG 899
Score = 63.2 bits (152), Expect = 8e-08
Identities = 40/181 (22%), Positives = 82/181 (45%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ +Y K +A R+ L + +Y+++I + + K +R M
Sbjct: 701 MLDVYGKSRLFKKARKVLWLARKRGLVDVISYNTIIAAYGQSKDLKKMLSTVRQMQFNGF 760
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L++Y ++G+ E +VL+ M E+ + YN +I YG ++ +
Sbjct: 761 SVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVAN 820
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+ LK GL PD +Y ++++ +G E+A+ ++++ G P+ + LIN
Sbjct: 821 VLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLINALR 880
Query: 542 K 544
K
Sbjct: 881 K 881
Score = 58.9 bits (141), Expect = 2e-06
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Frame = +2
Query: 71 LKLKCIKAYSSMITICTRLRLYHKSED------IIRVMNEEK-ILPDTENWLVRLNAYCQ 229
LKLK + MI +R+Y KS ++ M+E+K I+PD + L Y Q
Sbjct: 578 LKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLRIYQQ 637
Query: 230 QGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETT 409
G ++ + + +L+TG+ + YN +I R + LF + G P+ T
Sbjct: 638 CGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALPVDELSRLFDEMLLHGFAPNTIT 697
Query: 410 YRSMVEGFGRTDNYEEA---LWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLE 580
M++ +G++ +++A LW K + + ++ T+I + D+ T+
Sbjct: 698 LNVMLDVYGKSRLFKKARKVLWLARKRGLV----DVISYNTIIAAYGQSKDLKKMLSTVR 753
Query: 581 DMRIAGCQYS-SIVSSLLQAYEKAGRIESVPQIL 679
M+ G S + + +L +Y K G+IES +L
Sbjct: 754 QMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVL 787
>ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer
[Oryza sativa Japonica Group] gi|50726131|dbj|BAD33652.1|
putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa
Japonica Group] gi|125605742|gb|EAZ44778.1| hypothetical
protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 293 bits (750), Expect = 4e-77
Identities = 139/238 (58%), Positives = 185/238 (77%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQ+ L +AEF F MR+ +KC+ AYS+M+T+ TRL + KSE++I +MN +++
Sbjct: 304 LMGLYQRIGNLPEAEFTFAKMRKCGIKCVNAYSAMVTLYTRLGHFAKSEEVITLMNNDEV 363
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENWLVRLNAYCQQGK EEAE VLKS+++ G+ N++AYNT+ITGYG+V++M+ A
Sbjct: 364 VPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAME 423
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F LKS GL PDETTYRSM+EGFGR D Y++A+ YY KL++ GF PN+SNFYT+INL A
Sbjct: 424 VFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLA 483
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLDA 715
++ D G T+ LEDMR AGCQ SSIV+ L++AY GR+ V QIL+A FY+KIL DA
Sbjct: 484 RHDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDA 541
Score = 61.6 bits (148), Expect = 2e-07
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Frame = +2
Query: 104 MITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETG 283
++ I + L++K+E + +M ++ + D ++ + A+ + G ++ M E G
Sbjct: 758 LLDIYGKAGLFNKAEKVF-LMARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAG 816
Query: 284 MPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEAL 463
P ++ AYN ++ YG+ ++ + Q ++ G D TY M+ +GR E
Sbjct: 817 FPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVA 876
Query: 464 WYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAG-----CQYSSIVSSL 628
+LKS G P+ ++ TLI G + +++MRI G Y++++++L
Sbjct: 877 NVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAAL 936
Score = 60.8 bits (146), Expect = 4e-07
Identities = 43/176 (24%), Positives = 82/176 (46%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K ++AE F R+ + I +Y+++I + + ++ M E
Sbjct: 758 LLDIYGKAGLFNKAEKVFLMARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGF 817
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY + G+ EE AVL+ M G + YN +I YGR ++ +
Sbjct: 818 PVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVAN 877
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LKS G PD +Y ++++ +G E+A+ ++++ G + + LI
Sbjct: 878 VLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLI 933
>gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 293 bits (750), Expect = 4e-77
Identities = 139/238 (58%), Positives = 185/238 (77%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQ+ L +AEF F MR+ +KC+ AYS+M+T+ TRL + KSE++I +MN +++
Sbjct: 304 LMGLYQRIGNLPEAEFTFAKMRKCGIKCVNAYSAMVTLYTRLGHFAKSEEVITLMNNDEV 363
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENWLVRLNAYCQQGK EEAE VLKS+++ G+ N++AYNT+ITGYG+V++M+ A
Sbjct: 364 VPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAME 423
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F LKS GL PDETTYRSM+EGFGR D Y++A+ YY KL++ GF PN+SNFYT+INL A
Sbjct: 424 VFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLA 483
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLDA 715
++ D G T+ LEDMR AGCQ SSIV+ L++AY GR+ V QIL+A FY+KIL DA
Sbjct: 484 RHDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDA 541
Score = 61.6 bits (148), Expect = 2e-07
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Frame = +2
Query: 104 MITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETG 283
++ I + L++K+E + +M ++ + D ++ + A+ + G ++ M E G
Sbjct: 758 LLDIYGKAGLFNKAEKVF-LMARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAG 816
Query: 284 MPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEAL 463
P ++ AYN ++ YG+ ++ + Q ++ G D TY M+ +GR E
Sbjct: 817 FPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVA 876
Query: 464 WYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAG-----CQYSSIVSSL 628
+LKS G P+ ++ TLI G + +++MRI G Y++++++L
Sbjct: 877 NVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAAL 936
Score = 60.8 bits (146), Expect = 4e-07
Identities = 43/176 (24%), Positives = 82/176 (46%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K ++AE F R+ + I +Y+++I + + ++ M E
Sbjct: 758 LLDIYGKAGLFNKAEKVFLMARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGF 817
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY + G+ EE AVL+ M G + YN +I YGR ++ +
Sbjct: 818 PVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWIEGVAN 877
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LKS G PD +Y ++++ +G E+A+ ++++ G + + LI
Sbjct: 878 VLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLI 933
>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315195|gb|EFH45618.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 906
Score = 292 bits (748), Expect = 6e-77
Identities = 143/237 (60%), Positives = 179/237 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEFAF HMR+ ++ C AYSSMITI TRLRLY K+E++I +M ++++
Sbjct: 253 LMGLYQKNWNVDEAEFAFSHMRKFEIVCESAYSSMITIYTRLRLYEKAEEVINLMKQDRV 312
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
ENWLV LNAY QQGK E+AE+VL SM G PNIIAYNTLITGYG+V+ M+AAK
Sbjct: 313 RLKLENWLVMLNAYSQQGKMEQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKS 372
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF L +GL PDET+YRSM+EG+GR DNYEEA YY++LK G+ PNSSN +TLINLQA
Sbjct: 373 LFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRCGYKPNSSNLFTLINLQA 432
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KYGD G +T+EDM GCQY SI+ +LQAYEK G+I+ VP +L+ SF+ I L+
Sbjct: 433 KYGDRDGAIKTIEDMTSIGCQYPSILGIILQAYEKVGKIDVVPYLLKGSFHNHIRLN 489
Score = 74.7 bits (182), Expect = 3e-11
Identities = 37/136 (27%), Positives = 74/136 (54%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY++++ + + K I++ M + PD + + +N Y +QG +E VLK
Sbjct: 770 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLK 829
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E+G+ P++ +YNTLI YG ++ A L + ++ + PD+ TY ++V + D
Sbjct: 830 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTALRKND 889
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 890 EFLEAIKWSLWMKQMG 905
Score = 56.6 bits (135), Expect = 8e-06
Identities = 35/165 (21%), Positives = 75/165 (45%)
Frame = +2
Query: 95 YSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSML 274
++ ++ + + +L+ K ++ + ++ D ++ + AY + + +K+M
Sbjct: 704 FNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDFTNMSSAIKNMQ 762
Query: 275 ETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYE 454
G ++ AYNTL+ YG+ M+ + + + +K PD TY M+ +G +
Sbjct: 763 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 822
Query: 455 EALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMR 589
E ++LK G P+ ++ TLI G V +++MR
Sbjct: 823 EVAGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 867
>ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutrema salsugineum]
gi|557113835|gb|ESQ54118.1| hypothetical protein
EUTSA_v10024344mg [Eutrema salsugineum]
Length = 916
Score = 290 bits (743), Expect = 2e-76
Identities = 142/237 (59%), Positives = 181/237 (76%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEFAF HMRR + C AYS+MIT+ TRLRLY K+E++I +M E+++
Sbjct: 263 LMGLYQKNRNVDEAEFAFTHMRRFGIVCESAYSAMITLYTRLRLYGKAEEVIHLMKEDRV 322
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+ ENWLV LNAY QQGK E+AE+VL SM G PNIIAYNT+ITGYG+V+ M+AA+
Sbjct: 323 RLNLENWLVVLNAYSQQGKMEQAESVLISMEAAGFSPNIIAYNTIITGYGKVSKMEAAQS 382
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF L +GL PDET+YRSM+EG+GR DNY+EA YY++LK LG+ PNSSN +TLINLQA
Sbjct: 383 LFNRLCDIGLEPDETSYRSMIEGWGRADNYKEAKCYYQELKRLGYKPNSSNLFTLINLQA 442
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KYGD G +T+EDM GCQYSSI+ +LQAYEK G+I+ VP +L+ SF+ I L+
Sbjct: 443 KYGDNDGAIKTIEDMVNVGCQYSSILGIILQAYEKVGKIDEVPYVLKGSFHNHIRLN 499
Score = 74.7 bits (182), Expect = 3e-11
Identities = 39/136 (28%), Positives = 73/136 (53%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+SM+ + + K I+ M + D + + +N Y +QG +E VL+
Sbjct: 780 LEAYNSMLDAYGKDKQMEKFRSILNRMKKSTCETDHYTYNIMINIYGEQGWIDEVTDVLR 839
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E+G+ P++ +YNTLI YG ++ A L + ++ G+ PD+ TY ++V R D
Sbjct: 840 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRVKGITPDKVTYTNLVTALRRND 899
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 900 EFLEAIKWSLWMKQMG 915
>gb|EOY31499.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 916
Score = 289 bits (740), Expect = 5e-76
Identities = 144/237 (60%), Positives = 178/237 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK S+AEF F MR + C AYS+MITI TRL LY K+EDII M ++K+
Sbjct: 263 LMGLYQKGWNASEAEFTFSQMRNSGIVCQSAYSAMITIYTRLSLYDKAEDIIGFMRKDKV 322
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+ + ENWLV LNAY Q+GK EEAE VL SM E G PNI+AYNTLITGYG+ +NM AA+
Sbjct: 323 ILNLENWLVMLNAYSQRGKLEEAEQVLVSMQEAGFSPNIVAYNTLITGYGKSSNMDAAQL 382
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F +++ VGL PDETTYRSM+EG+GR DNY+E WYY++LK LGF PNSSN YTLI LQA
Sbjct: 383 VFLSIQQVGLEPDETTYRSMIEGWGRADNYKEVKWYYKELKQLGFKPNSSNLYTLITLQA 442
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
K+GD G T+TL+DM CQ+SSI+ ++LQAYE+ GRI+ VP IL SFY+ +L D
Sbjct: 443 KHGDEEGATKTLDDMLKMRCQHSSILGTVLQAYERVGRIDKVPLILIGSFYEHVLKD 499
Score = 69.7 bits (169), Expect = 9e-10
Identities = 36/136 (26%), Positives = 69/136 (50%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+ M+ + K +++ M E D + + +N Y +Q +E AVL
Sbjct: 780 LEAYNCMLDTYGKDGQMEKFRSVLQRMKESNCALDRYTYNIMINIYGEQRWIDEVAAVLT 839
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E G+ P++ +YNTLI YG ++ A L + ++ G+ PD TY +++ + D
Sbjct: 840 ELKECGLGPDLCSYNTLIKAYGIAGMVEDAVGLIKEMRENGVEPDNITYNNLITALRKND 899
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 900 KFLEAVKWSLWMKQMG 915
>ref|XP_006857035.1| hypothetical protein AMTR_s00065p00020910 [Amborella trichopoda]
gi|548861118|gb|ERN18502.1| hypothetical protein
AMTR_s00065p00020910 [Amborella trichopoda]
Length = 903
Score = 287 bits (734), Expect = 3e-75
Identities = 140/237 (59%), Positives = 181/237 (76%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM+LYQK L +AEF G MR L C AYS+M+TI TRL LY KSE+I++ M E+++
Sbjct: 245 LMSLYQKGGNLEEAEFTLGQMRTHGLHCCVAYSAMMTIYTRLGLYEKSEEILKTMREDRV 304
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
P+ ENWLV+LN Y QQGK EEAE VL SM +G+ PNIIAYNTLITGYG++ +A++
Sbjct: 305 PPNLENWLVQLNVYSQQGKLEEAELVLLSMKRSGISPNIIAYNTLITGYGKMGKTEASRR 364
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F++L + G PDETTYRSM+EG+GR D Y+EA+WYY++LK GF PNSSNF+T+INLQ
Sbjct: 365 VFRDLCNNGFEPDETTYRSMIEGYGRADEYKEAIWYYQELKHKGFCPNSSNFFTVINLQG 424
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
K+ D GT QTL+DMR G QYSSI+ SLL+AYE+ R++ VP IL+ASFY+ +L D
Sbjct: 425 KHMDDEGTVQTLKDMREMGGQYSSILGSLLRAYERVERVDKVPLILKASFYESLLSD 481
Score = 60.1 bits (144), Expect = 7e-07
Identities = 33/136 (24%), Positives = 68/136 (50%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
+ AY++M+ + K +++ M E D + + +N Y ++G E+ AVL
Sbjct: 762 LAAYNAMLDAYGKGGEIDKFREVLEQMKEANCALDHYTYNIMINIYGKKGWIEDVVAVLG 821
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ + + P++ +YN LI YG ++ A +L + ++ G+ PD+ TY +++
Sbjct: 822 ELKKHELEPDLWSYNALIEAYGIARMVEEAVYLVKEMRDNGIEPDQVTYVNVIRALKNNG 881
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K LG
Sbjct: 882 HVLEAIKWSLWMKQLG 897
Score = 59.7 bits (143), Expect = 9e-07
Identities = 40/186 (21%), Positives = 82/186 (44%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K +A RR K+ +Y+++IT + + + + + + M
Sbjct: 699 LIDVYTKAGLFKRARKVLWMARRRKMVDAISYNTIITAYGKDKQFRRMKSASKQMQYAGF 758
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+ L+AY + G+ ++ VL+ M E + YN +I YG+ ++
Sbjct: 759 PVSLAAYNAMLDAYGKGGEIDKFREVLEQMKEANCALDHYTYNIMINIYGKKGWIEDVVA 818
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+ LK L PD +Y +++E +G EEA++ ++++ G P+ + +I
Sbjct: 819 VLGELKKHELEPDLWSYNALIEAYGIARMVEEAVYLVKEMRDNGIEPDQVTYVNVIRALK 878
Query: 542 KYGDVM 559
G V+
Sbjct: 879 NNGHVL 884
>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 955
Score = 285 bits (730), Expect = 8e-75
Identities = 141/237 (59%), Positives = 180/237 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEF F MR + C AYS+MITI TRL LY+K+E+II +M E+K+
Sbjct: 302 LMGLYQKGWNVEEAEFVFSKMRSFGIICQSAYSAMITIYTRLSLYNKAEEIIGLMGEDKV 361
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+ ENWLV LNAY QQG+ EEAE VL M E PNI+A+NTLITGYG+++NM AA+
Sbjct: 362 AMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQR 421
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF ++++ GL PDETTYRSM+EG+GRT NY+EA WYY++LK LG+ PNSSN YTLINLQA
Sbjct: 422 LFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGYMPNSSNLYTLINLQA 481
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
K+ D G TL+DM GCQ+SSI+ +LL+AYEKAGRI VP +L+ SFYQ +L++
Sbjct: 482 KHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINKVPLLLKDSFYQHVLVN 538
Score = 69.3 bits (168), Expect = 1e-09
Identities = 36/136 (26%), Positives = 70/136 (51%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+ M+ + ++++ M + D + + +N Y +QG +E VL
Sbjct: 819 LEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLT 878
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E G+ P++ +YNTLI YG ++ A L + ++ G+ PD+ TY +++ + D
Sbjct: 879 ELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKND 938
Query: 446 NYEEALWYYEKLKSLG 493
Y EA+ + +K LG
Sbjct: 939 KYLEAVKWSLWMKQLG 954
Score = 64.3 bits (155), Expect = 4e-08
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Frame = +2
Query: 95 YSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSML 274
++ M+ + + +L++K++++ M ++ L D ++ + AY + + +++M
Sbjct: 753 FNVMLDVYGKAKLFNKAKELFW-MARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQ 811
Query: 275 ETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYE 454
G ++ AYN ++ GYG+ M+ +++ Q +K D TY M+ +G +
Sbjct: 812 FDGFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWID 871
Query: 455 EALWYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSIV-SSLL 631
E +L+ G P+ ++ TLI G V +++MR G + I S+L+
Sbjct: 872 EVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLI 931
Query: 632 QAYEK 646
A +K
Sbjct: 932 TALQK 936
Score = 57.4 bits (137), Expect = 5e-06
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ +Y K ++A+ F R+ L + +Y+++I + + +R M +
Sbjct: 756 MLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGF 815
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+ Y ++G+ E VL+ M ++ + YN +I YG +
Sbjct: 816 SVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAG 875
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNS---SNFYTLIN 532
+ L+ GL PD +Y ++++ +G E+A+ ++++ G P+ SN T +
Sbjct: 876 VLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQ 935
Query: 533 LQAKY 547
KY
Sbjct: 936 KNDKY 940
>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 285 bits (728), Expect = 1e-74
Identities = 138/235 (58%), Positives = 177/235 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQKK + ++EFAF MR + C AY+SMITI R+ LY K+E++I++M E+K+
Sbjct: 241 LMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKV 300
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENW+V LNAYCQQGK EEAE V SM E G NIIAYNTLITGYG+ +NM A+
Sbjct: 301 IPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQR 360
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF +K+ G+ PDETTYRSM+EG+GR NY+ A WYY++LK G+ PNSSN +TLINLQA
Sbjct: 361 LFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQA 420
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKIL 706
K+ D GT +TL DM GC+ SSIV ++LQAYEKA R++SVP +L SFY+K+L
Sbjct: 421 KHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVL 475
Score = 63.5 bits (153), Expect = 6e-08
Identities = 34/137 (24%), Positives = 66/137 (48%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+ M+ + +++ M E D + + +N Y +QG +E VL
Sbjct: 758 LEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLT 817
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ G+ P++ +YNTLI YG ++ A L + ++ + PD TY +M+ R D
Sbjct: 818 ELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRND 877
Query: 446 NYEEALWYYEKLKSLGF 496
+ EA+ + +K + +
Sbjct: 878 QFLEAVKWSLWMKQMKY 894
Score = 60.8 bits (146), Expect = 4e-07
Identities = 38/176 (21%), Positives = 80/176 (45%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
++ +Y K ++A FG ++ L +Y++MI++ + + + ++ M
Sbjct: 695 MLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGF 754
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY ++ + E +VL+ M ET + YN +I YG +
Sbjct: 755 SVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAE 814
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LK+ GL PD +Y ++++ +G EEA ++++ P+ + +I
Sbjct: 815 VLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMI 870
>ref|XP_004975413.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like isoform X1 [Setaria italica]
Length = 957
Score = 283 bits (724), Expect = 4e-74
Identities = 139/238 (58%), Positives = 175/238 (73%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK LS+AEF F MR +KC+ AYS+MIT+ TRL L+ KSED I +MN + +
Sbjct: 297 LMGLYQKTGNLSEAEFTFAKMRNYNIKCVNAYSAMITLYTRLGLFAKSEDAIALMNNDGV 356
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENWLVRLN YCQQGK EEA+ V +SM++ G N++AYNTLITGYG+ +++ AK
Sbjct: 357 VPNMENWLVRLNVYCQQGKMEEAKLVFQSMVDEGFTLNVVAYNTLITGYGKSTDVQKAKE 416
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F +L S GL PDETTYRSMVEGFGR D YEEA+ YY +LKS GF PN+SNFYT+INL A
Sbjct: 417 VFDSLGSAGLVPDETTYRSMVEGFGRADKYEEAILYYRQLKSAGFRPNASNFYTMINLLA 476
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLDA 715
++ D G + LE MR AGCQ SSIV+ L++AY GR+ V IL+A Y+K L DA
Sbjct: 477 RHDDNEGAAEILEGMRAAGCQCSSIVTVLVRAYGTVGRMHKVLPILKACLYKKFLFDA 534
Score = 65.5 bits (158), Expect = 2e-08
Identities = 35/136 (25%), Positives = 68/136 (50%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+ M+ + + +++ M K D + + +N Y ++G E+ VL
Sbjct: 814 LEAYNCMLDAYGKAGQLEEFAAVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVANVLA 873
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ G+ P++ +YNTLI YG + A L Q ++ G++PD TY +++ R +
Sbjct: 874 ELKSRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYTNLIAALQRNE 933
Query: 446 NYEEALWYYEKLKSLG 493
N+ EA+ + +K G
Sbjct: 934 NFLEAVKWSLWMKQTG 949
Score = 63.9 bits (154), Expect = 5e-08
Identities = 44/176 (25%), Positives = 82/176 (46%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K ++AE F R+ L I Y+++I + + I+ M +
Sbjct: 751 LLDIYGKAGLFTRAEKVFLMARKQGLVDIITYNTIIAAYAKSGNFRSMNYFIQKMQDAGF 810
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY + G+ EE AVL+ M + YN +I YGR ++ +
Sbjct: 811 PVSLEAYNCMLDAYGKAGQLEEFAAVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVAN 870
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ LKS G+ PD +Y ++++ +G E+A+ ++++ G P+ + LI
Sbjct: 871 VLAELKSRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYTNLI 926
Score = 62.8 bits (151), Expect = 1e-07
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKA-YSSMITICTRLRLYHKSEDIIRVMNEEK 178
++ YQK L + + + + +++C + Y+ +I C R + I M ++
Sbjct: 681 MLRTYQKCGLLEKLADTYYWILKSQVECDEVMYNCIINCCGRAIPVDELSRIFDEMIQQG 740
Query: 179 ILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAK 358
L +T V L+ Y + G AE V + G+ +II YNT+I Y + N ++
Sbjct: 741 HLTNTVTLNVLLDIYGKAGLFTRAEKVFLMARKQGLV-DIITYNTIIAAYAKSGNFRSMN 799
Query: 359 HLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQ 538
+ Q ++ G Y M++ +G+ EE +K+K + + +IN+
Sbjct: 800 YFIQKMQDAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMKRAKCKFDHYTYNIMINIY 859
Query: 539 AKYGDVMGTTQTLEDMRIAGCQ---YSSIVSSLLQAYEKAGRIESVPQILE 682
+ G + L +++ G + YS ++L++AY A E ++++
Sbjct: 860 GRRGWIEDVANVLAELKSRGVEPDLYS--YNTLIKAYGIARMPEDAVKLMQ 908
>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 283 bits (723), Expect = 5e-74
Identities = 140/237 (59%), Positives = 177/237 (74%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEFAF HMR+ + C AYSSMITI TRLRLY K+E++I +M ++++
Sbjct: 251 LMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRV 310
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
ENWLV LNAY QQGK E AE++L SM G PNIIAYNTLITGYG++ M+AA+
Sbjct: 311 RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 370
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF L ++GL PDET+YRSM+EG+GR DNYEEA YY++LK G+ PNS N +TLINLQA
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQA 430
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KYGD G +T+EDM GCQYSSI+ +LQAYEK G+I+ VP +L+ SF+ I L+
Sbjct: 431 KYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLN 487
Score = 73.6 bits (179), Expect = 6e-11
Identities = 38/136 (27%), Positives = 74/136 (54%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY++++ + + K I++ M + PD + + +N Y +QG +E VLK
Sbjct: 768 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLK 827
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E+G+ P++ +YNTLI YG ++ A L + ++ + PD+ TY ++V R D
Sbjct: 828 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRND 887
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 888 EFLEAIKWSLWMKQMG 903
Score = 56.6 bits (135), Expect = 8e-06
Identities = 37/176 (21%), Positives = 79/176 (44%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K + F +R + + +Y+++I + + Y I+ M +
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 764
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY + + E+ ++LK M ++ P+ YN +I YG +
Sbjct: 765 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 824
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ + LK GL PD +Y ++++ +G EEA+ ++++ P+ + L+
Sbjct: 825 VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
>emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|7269983|emb|CAB79800.1|
puative protein [Arabidopsis thaliana]
Length = 1075
Score = 283 bits (723), Expect = 5e-74
Identities = 140/237 (59%), Positives = 177/237 (74%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEFAF HMR+ + C AYSSMITI TRLRLY K+E++I +M ++++
Sbjct: 422 LMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRV 481
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
ENWLV LNAY QQGK E AE++L SM G PNIIAYNTLITGYG++ M+AA+
Sbjct: 482 RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 541
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF L ++GL PDET+YRSM+EG+GR DNYEEA YY++LK G+ PNS N +TLINLQA
Sbjct: 542 LFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQA 601
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KYGD G +T+EDM GCQYSSI+ +LQAYEK G+I+ VP +L+ SF+ I L+
Sbjct: 602 KYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLN 658
Score = 73.6 bits (179), Expect = 6e-11
Identities = 38/136 (27%), Positives = 74/136 (54%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY++++ + + K I++ M + PD + + +N Y +QG +E VLK
Sbjct: 939 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLK 998
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E+G+ P++ +YNTLI YG ++ A L + ++ + PD+ TY ++V R D
Sbjct: 999 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRND 1058
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 1059 EFLEAIKWSLWMKQMG 1074
Score = 56.6 bits (135), Expect = 8e-06
Identities = 37/176 (21%), Positives = 79/176 (44%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K + F +R + + +Y+++I + + Y I+ M +
Sbjct: 876 LLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 935
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY + + E+ ++LK M ++ P+ YN +I YG +
Sbjct: 936 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 995
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLI 529
+ + LK GL PD +Y ++++ +G EEA+ ++++ P+ + L+
Sbjct: 996 VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 1051
>gb|EMT06657.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 923
Score = 282 bits (722), Expect = 7e-74
Identities = 136/238 (57%), Positives = 180/238 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK L +AEFAF MR +KC+ AYS+MIT+ TR RL+ KSE++I +M ++ +
Sbjct: 268 LMGLYQKTGSLKEAEFAFAKMRECNVKCVNAYSAMITLYTRSRLFDKSEEVITLMKDDGV 327
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P+ ENWLV+LNAY QQGK EEAE VL+SM + G+ PN++A NT+ITGYG+V+ M+ AK
Sbjct: 328 VPNMENWLVQLNAYSQQGKMEEAELVLQSMEDGGVSPNVVACNTVITGYGKVSEMQKAKE 387
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F L+S GL PDETTYRSM+EGFGR D ++EA+ YY+KLKS GF PN+SNFYT+INL A
Sbjct: 388 VFHRLESSGLAPDETTYRSMIEGFGRADKHQEAISYYKKLKSSGFQPNASNFYTMINLIA 447
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLDA 715
++ D + L DMR AGCQ SSIV+ L++AY GR+ V IL++ FY+K+L DA
Sbjct: 448 RHDDSESAAEILRDMRAAGCQCSSIVTILVRAYGTVGRMHKVLPILQSCFYKKVLYDA 505
Score = 64.7 bits (156), Expect = 3e-08
Identities = 38/163 (23%), Positives = 77/163 (47%)
Frame = +2
Query: 104 MITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETG 283
++ I + L++++E + + ++ L DT ++ + AY Q G ++ M + G
Sbjct: 722 LLDIYGKAGLFNRAEKVFSMARKQG-LADTISYNTIIAAYAQSGNYRSMNYFVQKMQDAG 780
Query: 284 MPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEAL 463
P ++ AYN ++ YG+ ++ + Q ++ + D TY M+ +GR E
Sbjct: 781 FPVSLEAYNCMLNAYGKSGQLEEFSAVLQKMRRARCDFDHYTYNIMMNIYGRKGWIEGVA 840
Query: 464 WYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRI 592
+ +LKS G P+ ++ TLI G + +++MRI
Sbjct: 841 YVLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI 883
Score = 63.2 bits (152), Expect = 8e-08
Identities = 39/161 (24%), Positives = 76/161 (47%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K ++AE F R+ L +Y+++I + Y ++ M +
Sbjct: 722 LLDIYGKAGLFNRAEKVFSMARKQGLADTISYNTIIAAYAQSGNYRSMNYFVQKMQDAGF 781
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + LNAY + G+ EE AVL+ M + YN ++ YGR ++ +
Sbjct: 782 PVSLEAYNCMLNAYGKSGQLEEFSAVLQKMRRARCDFDHYTYNIMMNIYGRKGWIEGVAY 841
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLK 484
+ LKS G+ PD +Y ++++ +G E+A+ ++++
Sbjct: 842 VLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMR 882
Score = 61.6 bits (148), Expect = 2e-07
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKA-YSSMITICTRLRLYHKSEDIIRVMNEEK 178
++ YQK L + + + + +++C +A Y+ +I C + I M +
Sbjct: 652 MLRTYQKCGLLEKLTDTYYRILKSEVECDEAMYNCIINCCGPAIPVDELSRIFDEMIQLG 711
Query: 179 ILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAK 358
L T V L+ Y + G AE V + G+ + I+YNT+I Y + N ++
Sbjct: 712 HLASTVTLNVLLDIYGKAGLFNRAEKVFSMARKQGLA-DTISYNTIIAAYAQSGNYRSMN 770
Query: 359 HLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQ 538
+ Q ++ G Y M+ +G++ EE +K++ + + ++N+
Sbjct: 771 YFVQKMQDAGFPVSLEAYNCMLNAYGKSGQLEEFSAVLQKMRRARCDFDHYTYNIMMNIY 830
Query: 539 AKYGDVMGTTQTLEDMRIAGCQ---YSSIVSSLLQAYEKAGRIESVPQILE 682
+ G + G L +++ G + YS ++L++AY AG E ++++
Sbjct: 831 GRKGWIEGVAYVLSELKSRGVEPDLYS--YNTLIKAYGIAGMPEDAVKLMQ 879
>ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Capsella rubella]
gi|482554241|gb|EOA18434.1| hypothetical protein
CARUB_v10006977mg [Capsella rubella]
Length = 907
Score = 281 bits (720), Expect = 1e-73
Identities = 137/237 (57%), Positives = 178/237 (75%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQK + +AEFAF MR+ + C AYS+MITI TRLRLY K+E++I +M ++++
Sbjct: 255 LMGLYQKNWNVDEAEFAFSQMRKFGIVCESAYSAMITIYTRLRLYVKAEEVIDLMKKDRV 314
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
ENWLV LNAY QQGK E+AE+VL SM G NIIAYNTLITGYG+V+ M+AA+
Sbjct: 315 RLKLENWLVMLNAYSQQGKMEQAESVLTSMEAAGFSQNIIAYNTLITGYGKVSKMEAAQS 374
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
LF +G+ PDET+YRSM+EG+GR DNY+EA YY++LK LG+ PNSSN +TLINLQA
Sbjct: 375 LFHRFYDIGIEPDETSYRSMIEGWGRADNYDEAKHYYQELKQLGYKPNSSNLFTLINLQA 434
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLD 712
KYGD G +T++DM GCQYSSI+ +LQAYEK G+++ VP +LE SF+ IL++
Sbjct: 435 KYGDKDGAIKTIKDMVNIGCQYSSILGIILQAYEKVGKLDVVPYVLEGSFHNHILIN 491
Score = 66.2 bits (160), Expect = 1e-08
Identities = 38/136 (27%), Positives = 72/136 (52%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+SM+ + + K I++ M + D + + +N Y +QG +E VL
Sbjct: 772 LEAYNSMLDAYGKDKQMEKFRSILKRM-KSTCGSDHYTYNIMINIYGEQGWIDEVTEVLT 830
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ E+G+ P++ +YNTLI YG ++ A L + ++ + PD+ TY ++V R D
Sbjct: 831 ELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKKIIPDKVTYTNLVTALRRND 890
Query: 446 NYEEALWYYEKLKSLG 493
+ EA+ + +K +G
Sbjct: 891 EFLEAIKWSLWMKQMG 906
Score = 61.6 bits (148), Expect = 2e-07
Identities = 53/246 (21%), Positives = 110/246 (44%), Gaps = 9/246 (3%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKA-YSSMITICTRLRLYHKSEDIIRVMNEEK 178
++ LYQK + + + +R+ + + Y+ +I C R + M
Sbjct: 639 MLRLYQKCGLQDKLQLLYYRIRKSGIHWDQEMYNCVINCCARALPLDELSSTFEEMIRNG 698
Query: 179 ILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAK 358
P+T + V L+ Y + E+ + G+ ++I+YNT+I YG+ + K
Sbjct: 699 FTPNTVTFNVLLDVYGKAKLFEKVNGLFLLAKRHGVV-DVISYNTIIAAYGQNKDFKNMS 757
Query: 359 HLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYT---LI 529
+N++ G + Y SM++ +G+ E+ +++KS S+ YT +I
Sbjct: 758 SAIKNMQFDGFSVSLEAYNSMLDAYGKDKQMEKFRSILKRMKS----TCGSDHYTYNIMI 813
Query: 530 NLQAKYGDVMGTTQTLEDMRIAG-----CQYSSIVSSLLQAYEKAGRIESVPQILEASFY 694
N+ + G + T+ L +++ +G C Y ++L++AY G +E +++
Sbjct: 814 NIYGEQGWIDEVTEVLTELKESGLGPDLCSY----NTLIKAYGIGGMVEEAVGLVKEMRG 869
Query: 695 QKILLD 712
+KI+ D
Sbjct: 870 KKIIPD 875
>ref|XP_006660637.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Oryza brachyantha]
Length = 952
Score = 280 bits (716), Expect = 3e-73
Identities = 135/238 (56%), Positives = 178/238 (74%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
LM LYQ+ L +AEF F MR +KCI AYS+MIT+ TR L+ KSE++I +M +++
Sbjct: 298 LMGLYQRTGNLPEAEFTFAKMRNCSIKCINAYSAMITLYTRAGLFAKSEEVITLMKYDEV 357
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
+P ENWLVRLNAY QQGK EEAE VL+SM++ G+ +++AYNTLITGYG+V++M+ A
Sbjct: 358 VPSKENWLVRLNAYSQQGKMEEAELVLRSMVDEGIDLDVVAYNTLITGYGKVSDMQKAME 417
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+F LKS GL PDETTYRSMVEG GR D Y++++ YY+KL+ GF PN+SNFYT+INL A
Sbjct: 418 VFNRLKSAGLAPDETTYRSMVEGLGRADKYKDSILYYQKLRKSGFKPNASNFYTMINLLA 477
Query: 542 KYGDVMGTTQTLEDMRIAGCQYSSIVSSLLQAYEKAGRIESVPQILEASFYQKILLDA 715
++ D G + LEDMR AGCQ SSIV+ L++AY GR+ V QIL+A FY+ +L DA
Sbjct: 478 RHDDSEGAKEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHRVLQILQACFYKNVLFDA 535
Score = 64.3 bits (155), Expect = 4e-08
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Frame = +2
Query: 104 MITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETG 283
++ I + L++++E + +M ++ L D ++ + AY + G ++ M E G
Sbjct: 752 LLDIYGKAGLFNRAEKVF-LMARKQGLADIISYNTIIAAYAKNGDFRSMTYFVQRMQEAG 810
Query: 284 MPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEAL 463
P ++ AYN ++ YG+ ++ + Q ++ + D TY M+ +GR E
Sbjct: 811 FPVSLEAYNCMLDAYGKTGQLEEFAAVLQKMERARCDLDHYTYNIMINIYGRRGWIEGVA 870
Query: 464 WYYEKLKSLGFHPNSSNFYTLINLQAKYGDVMGTTQTLEDMRIAGCQYSSIV-SSLLQAY 640
+LKS G P+ ++ TLI + G + +++MR+ G I ++L+ A
Sbjct: 871 NVLAELKSRGLEPDLYSYNTLIKVYGIAGMPEDAVKLMQEMRLKGISADRITYTNLIAAL 930
Query: 641 EKAG 652
++ G
Sbjct: 931 QRNG 934
Score = 62.8 bits (151), Expect = 1e-07
Identities = 45/186 (24%), Positives = 86/186 (46%)
Frame = +2
Query: 2 LMALYQKKSCLSQAEFAFGHMRRLKLKCIKAYSSMITICTRLRLYHKSEDIIRVMNEEKI 181
L+ +Y K ++AE F R+ L I +Y+++I + + ++ M E
Sbjct: 752 LLDIYGKAGLFNRAEKVFLMARKQGLADIISYNTIIAAYAKNGDFRSMTYFVQRMQEAGF 811
Query: 182 LPDTENWLVRLNAYCQQGKTEEAEAVLKSMLETGMPPNIIAYNTLITGYGRVANMKAAKH 361
E + L+AY + G+ EE AVL+ M + YN +I YGR ++ +
Sbjct: 812 PVSLEAYNCMLDAYGKTGQLEEFAAVLQKMERARCDLDHYTYNIMINIYGRRGWIEGVAN 871
Query: 362 LFQNLKSVGLNPDETTYRSMVEGFGRTDNYEEALWYYEKLKSLGFHPNSSNFYTLINLQA 541
+ LKS GL PD +Y ++++ +G E+A+ ++++ G + + LI
Sbjct: 872 VLAELKSRGLEPDLYSYNTLIKVYGIAGMPEDAVKLMQEMRLKGISADRITYTNLIAALQ 931
Query: 542 KYGDVM 559
+ G+ +
Sbjct: 932 RNGNFL 937
Score = 57.4 bits (137), Expect = 5e-06
Identities = 33/136 (24%), Positives = 65/136 (47%)
Frame = +2
Query: 86 IKAYSSMITICTRLRLYHKSEDIIRVMNEEKILPDTENWLVRLNAYCQQGKTEEAEAVLK 265
++AY+ M+ + + +++ M + D + + +N Y ++G E VL
Sbjct: 815 LEAYNCMLDAYGKTGQLEEFAAVLQKMERARCDLDHYTYNIMINIYGRRGWIEGVANVLA 874
Query: 266 SMLETGMPPNIIAYNTLITGYGRVANMKAAKHLFQNLKSVGLNPDETTYRSMVEGFGRTD 445
+ G+ P++ +YNTLI YG + A L Q ++ G++ D TY +++ R
Sbjct: 875 ELKSRGLEPDLYSYNTLIKVYGIAGMPEDAVKLMQEMRLKGISADRITYTNLIAALQRNG 934
Query: 446 NYEEALWYYEKLKSLG 493
N+ EA+ + +K G
Sbjct: 935 NFLEAVKWSLWMKQTG 950