BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024289
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006645273.1| PREDICTED: nuclear polyadenylated RNA-bindin...    76   5e-12
gb|EEE55939.1| hypothetical protein OsJ_04632 [Oryza sativa Japo...    70   3e-10
gb|EEC72088.1| hypothetical protein OsI_05033 [Oryza sativa Indi...    70   3e-10
dbj|BAD88165.1| unknown protein [Oryza sativa Japonica Group] gi...    70   3e-10
ref|XP_004971154.1| PREDICTED: unconventional prefoldin RPB5 int...    68   1e-09
ref|NP_001169771.1| hypothetical protein [Zea mays] gi|224031579...    65   1e-08
tpg|DAA55997.1| TPA: hypothetical protein ZEAMMB73_930543 [Zea m...    63   5e-08
ref|XP_003567428.1| PREDICTED: uncharacterized protein LOC100828...    59   1e-06
gb|EMT25816.1| RNA polymerase II subunit 5-mediating protein-lik...    58   1e-06
gb|EMS59612.1| RNA polymerase II subunit 5-mediating protein-lik...    56   6e-06
emb|CBI21871.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_006645273.1| PREDICTED: nuclear polyadenylated RNA-binding protein 3-like [Oryza
           brachyantha]
          Length = 292

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
 Frame = -1

Query: 509 KLKDPLQKASDQKVLSSFISRQTGNISKQQLK-EEAFSNSRMQFPVE-AHSFSN-KELSV 339
           +LK  L+K   +++L S     + +        + +  NS +Q PV+ A SF +  + +V
Sbjct: 149 QLKSALKKPGGREILKSASFTPSSSTPHSVFPGQTSIINSEIQLPVKKAVSFQDDNKHTV 208

Query: 338 GKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLDPQPVQSSKN 159
              K+   P G + S S +E S   T      I+SSG+KAF+GSI+E D +   +Q SK+
Sbjct: 209 DPSKSLPLPRGPKHSSSILEVSSDNTKSHDRKIISSGQKAFTGSIIEHDDNIATLQPSKS 268

Query: 158 TNLSQSSAQSSTKPVSRFKMQKGNR 84
            +L Q+ A SS++PVSRFKMQKG R
Sbjct: 269 DSL-QNPASSSSRPVSRFKMQKGGR 292


>gb|EEE55939.1| hypothetical protein OsJ_04632 [Oryza sativa Japonica Group]
          Length = 408

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
 Frame = -1

Query: 509 KLKDPLQKASDQKVLSSFISRQTGNISKQQLKEEAFS-NSRMQFPVE-AHSFSNKEL-SV 339
           +LK  L+K   +++L S     + +        +  + N  +Q P++ A SF +    +V
Sbjct: 265 QLKSALKKPGGREILKSASFAPSASTPHSVFPGQTSTINPGIQLPLKKAVSFQDDNRHTV 324

Query: 338 GKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLDPQPVQSSKN 159
           G  K+   P G + S   ++ S    T     I+SSG+KAF+GSI+E D +   +Q SK+
Sbjct: 325 GPSKSLPLPQGPKHSSPILQVSSDNPTSHDRKIMSSGQKAFTGSIIEHDDNISTLQPSKS 384

Query: 158 TNLSQSSAQSSTKPVSRFKMQKGNR 84
             L Q+ A SS++PVSRFKMQKG R
Sbjct: 385 AAL-QNPASSSSRPVSRFKMQKGGR 408


>gb|EEC72088.1| hypothetical protein OsI_05033 [Oryza sativa Indica Group]
          Length = 408

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
 Frame = -1

Query: 509 KLKDPLQKASDQKVLSSFISRQTGNISKQQLKEEAFS-NSRMQFPVE-AHSFSNKEL-SV 339
           +LK  L+K   +++L S     + +        +  + N  +Q P++ A SF +    +V
Sbjct: 265 QLKSALKKPGGREILKSASFAPSASTPHSVFPGQTSTINPGIQLPLKKAVSFQDDNRHTV 324

Query: 338 GKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLDPQPVQSSKN 159
           G  K+   P G + S   ++ S    T     I+SSG+KAF+GSI+E D +   +Q SK+
Sbjct: 325 GPSKSLPLPQGPKHSSPILQVSSDNPTSHDRKIMSSGQKAFTGSIIEHDDNISTLQPSKS 384

Query: 158 TNLSQSSAQSSTKPVSRFKMQKGNR 84
             L Q+ A SS++PVSRFKMQKG R
Sbjct: 385 AAL-QNPASSSSRPVSRFKMQKGGR 408


>dbj|BAD88165.1| unknown protein [Oryza sativa Japonica Group]
           gi|215687030|dbj|BAG90876.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 295

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
 Frame = -1

Query: 509 KLKDPLQKASDQKVLSSFISRQTGNISKQQLKEEAFS-NSRMQFPVE-AHSFSNKEL-SV 339
           +LK  L+K   +++L S     + +        +  + N  +Q P++ A SF +    +V
Sbjct: 152 QLKSALKKPGGREILKSASFAPSASTPHSVFPGQTSTINPGIQLPLKKAVSFQDDNRHTV 211

Query: 338 GKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLDPQPVQSSKN 159
           G  K+   P G + S   ++ S    T     I+SSG+KAF+GSI+E D +   +Q SK+
Sbjct: 212 GPSKSLPLPQGPKHSSPILQVSSDNPTSHDRKIMSSGQKAFTGSIIEHDDNISTLQPSKS 271

Query: 158 TNLSQSSAQSSTKPVSRFKMQKGNR 84
             L Q+ A SS++PVSRFKMQKG R
Sbjct: 272 AAL-QNPASSSSRPVSRFKMQKGGR 295


>ref|XP_004971154.1| PREDICTED: unconventional prefoldin RPB5 interactor-like [Setaria
           italica]
          Length = 401

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
 Frame = -1

Query: 509 KLKDPLQKASDQKVLSSFISRQTGNISKQQLK-EEAFSNSRMQFPVEAHSFSNKELSVGK 333
           +LK  L+K   +++L       + + S      + + +NS ++   +A SF + +  VG 
Sbjct: 260 QLKSALKKPGGEELLRGISHAPSAHTSHSVFPGQSSITNSEVRVR-KAVSFEDDKHVVGS 318

Query: 332 EKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLDPQPVQSSKNTN 153
            K+ S P          + S      +   I+SSGR+AF+GSI+ERD +  P+Q    ++
Sbjct: 319 SKSPSLPPDPSHPAPGFKGSSDPAPSRERKIISSGRQAFTGSIIERDDNLLPIQPPVGSS 378

Query: 152 LSQSSAQSSTKPVSRFKMQKGNR 84
            ++    +S++P+SRFKMQKG R
Sbjct: 379 SAKPGTSASSRPMSRFKMQKGER 401


>ref|NP_001169771.1| hypothetical protein [Zea mays] gi|224031579|gb|ACN34865.1| unknown
           [Zea mays] gi|413951412|gb|AFW84061.1| hypothetical
           protein ZEAMMB73_620659 [Zea mays]
          Length = 400

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
 Frame = -1

Query: 506 LKDPLQKASDQKVLSSFISRQTGNISKQQLK-EEAFSNSRMQFPVEAHSFSNKELSVGKE 330
           +K  L+K    ++L     + + + S      + + +NS ++   +A +F + +  V   
Sbjct: 259 IKSALKKPGGDEMLIGISHKPSSHTSHLAFPGQTSATNSDVRVHTKAVTFEDDKYVVSSS 318

Query: 329 KTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLDPQPVQSSKNTNL 150
           K+      +  S   +++S      +   I+SSGRKAF+GSI+E D +   ++ S  ++L
Sbjct: 319 KSPPLLLDSIQSDPVLKNSSDPALSRDRKIISSGRKAFTGSIIEHDDNVSTIEPSVASSL 378

Query: 149 SQSSAQSSTKPVSRFKMQKGNR 84
           ++    +S++PVSRFKMQKG R
Sbjct: 379 AKPGTCASSRPVSRFKMQKGGR 400


>tpg|DAA55997.1| TPA: hypothetical protein ZEAMMB73_930543 [Zea mays]
          Length = 585

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = -1

Query: 365 SFSNKELSVGKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIVERDLD 186
           SF + +  V   K+ +   G+  S   ++ S   T      I+SSGRKAF+GSIVE D D
Sbjct: 471 SFEDDKFVVSSSKSPTLLVGSIQSDPGLKSSSDPTPSCDRKIISSGRKAFTGSIVEHDDD 530

Query: 185 P-QPVQSSKNTNLSQSSAQSSTKPVSRFKMQKGNR 84
               +Q S   +L++    +S++P+S+FKMQKG R
Sbjct: 531 DLSTIQPSAGNSLAKPGTSASSRPMSKFKMQKGGR 565


>ref|XP_003567428.1| PREDICTED: uncharacterized protein LOC100828079 [Brachypodium
           distachyon]
          Length = 373

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 55/99 (55%)
 Frame = -1

Query: 380 PVEAHSFSNKELSVGKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIV 201
           P  + S  N E+ V   K  S     +  VS ++ SP     +  NI+SS +KAF+GSIV
Sbjct: 276 PSASTSKINSEVQVPFRKAVSFKDDNRHVVSSLK-SPSLAPSRDRNIISSRQKAFTGSIV 334

Query: 200 ERDLDPQPVQSSKNTNLSQSSAQSSTKPVSRFKMQKGNR 84
           E D     +Q  ++ +  ++ + + ++PVSRFKMQKG R
Sbjct: 335 EHDDSLSAIQPPRSNDSGKAVSDAPSRPVSRFKMQKGGR 373


>gb|EMT25816.1| RNA polymerase II subunit 5-mediating protein-like protein
           [Aegilops tauschii]
          Length = 379

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
 Frame = -1

Query: 542 DHKYEVIEPKQKLKDPLQKASDQKVLS--SFISRQTGNISKQ---QLK--------EEAF 402
           D   E  E  ++  D L   ++   +S  + +S   GN  +Q   QLK        +EA 
Sbjct: 212 DEDAETSEDGEENGDTLSYGNEHDNVSFGASVSGSGGNDQRQGNGQLKSALKKLGEKEAL 271

Query: 401 SNSRMQFPVEAHSFSNKELSVGKEKTAS--SPFGAQSSVSKIEDSPHETTGQTLNIVSSG 228
             S +  P  + S +N E+     K  S     G   S S+    P  ++ +   I+  G
Sbjct: 272 QGSSLA-PSGSTSITNSEVQASLRKAVSFKDENGQIVSSSRYSSGPKVSSSRDRKILPGG 330

Query: 227 RKAFSGSIVERDLDPQPV-QSSKNTNLSQSSAQSSTKPVSRFKMQKGNR 84
           +KAF+GSIVE D     + Q   N +   +S+ SS++P+SRFKMQKG R
Sbjct: 331 QKAFTGSIVEHDEGLSAIEQPRSNDSEKAASSASSSRPMSRFKMQKGGR 379


>gb|EMS59612.1| RNA polymerase II subunit 5-mediating protein-like protein
           [Triticum urartu]
          Length = 381

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
 Frame = -1

Query: 380 PVEAHSFSNKELSVGKEKTAS--SPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGS 207
           P  + S +N E+     K  S     G   S S+    P  ++ +   I+  G+KAF+GS
Sbjct: 280 PSGSTSITNSEVQASLRKAVSFKDENGQIVSSSRYSSGPKVSSSRDRQILPGGQKAFTGS 339

Query: 206 IVERDLDPQPV-QSSKNTNLSQSSAQSSTKPVSRFKMQKGNR 84
           IVE D     + Q   N +   +S+ SS++P+SRFKMQKG R
Sbjct: 340 IVEHDEGLSVIEQPRSNDSEKPASSASSSRPMSRFKMQKGGR 381


>emb|CBI21871.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
 Frame = -1

Query: 542 DHKYEVIEPKQKLKDPLQKASDQKVLSSFISRQTGNISKQQLKEEAFSNSRMQ------F 381
           DH    +E +Q ++ PL  + D+   +  +      +SKQ  +E+  +  +++       
Sbjct: 246 DHVLGSLEERQ-VRKPLHHSKDEYATTEEL------LSKQHFEEDFANQLKLEGLKEQSV 298

Query: 380 PVEAHSFSNKELSVGKEKTASSPFGAQSSVSKIEDSPHETTGQTLNIVSSGRKAFSGSIV 201
           P ++   S+ + S     T SS  G + ++  +  S  ET+ Q+    +   KAF+GSIV
Sbjct: 299 PKDSDDVSHGK-SFANRATQSSSHG-KDNIQALPTSKAETSVQSSKPATDSLKAFTGSIV 356

Query: 200 ERDLDPQPVQSSKNTNLSQSSAQSSTKPVSRFKMQK 93
           E   + Q     +  + SQSS    TKPVSRFKMQ+
Sbjct: 357 EHTRNIQMNPREQAASSSQSSGSQPTKPVSRFKMQR 392