BLASTX nr result
ID: Zingiber24_contig00024286
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00024286
(255 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [A... 89 8e-16
ref|XP_006662144.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [A... 82 6e-14
gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati... 76 4e-12
gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japo... 76 4e-12
gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indi... 74 2e-11
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
emb|CBI24516.3| unnamed protein product [Vitis vinifera] 59 5e-07
>ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Brachypodium distachyon]
Length = 926
Score = 92.0 bits (227), Expect = 7e-17
Identities = 45/83 (54%), Positives = 61/83 (73%)
Frame = -1
Query: 249 QPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPD 70
+P LA KL+EAR+MLFRLLPQ K S+E+K++ A NI++ +V++GMMPD
Sbjct: 659 RPSLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPD 718
Query: 69 LHFYNGILNGLCRAKMIPDAYDL 1
LH YNG+LNGLCRA+ + DAY+L
Sbjct: 719 LHIYNGMLNGLCRAQKMDDAYNL 741
>ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [Amborella trichopoda]
gi|548862789|gb|ERN20145.1| hypothetical protein
AMTR_s00066p00081840 [Amborella trichopoda]
Length = 992
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = -1
Query: 225 EEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPDLHFYNGIL 46
E+AR MLF LLPQK + + S+E+K+E ALN+MR ++D+G+MPDLH YNG++
Sbjct: 734 EDARKMLFNLLPQKTMEPSRLEQRFLCNSSEEKIELALNLMRDMIDDGLMPDLHIYNGMI 793
Query: 45 NGLCRAKMIPDAYDL 1
NG CRA M+ DAYDL
Sbjct: 794 NGFCRADMMGDAYDL 808
>ref|XP_006662144.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like, partial [Oryza brachyantha]
Length = 852
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/83 (51%), Positives = 59/83 (71%)
Frame = -1
Query: 249 QPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPD 70
+P L KL+EAR+MLFRLLPQ + K Y S E+K++ A +I++ + ++GMMPD
Sbjct: 586 RPSLPKKLKEARYMLFRLLPQI-IDTRKGKQKDKYISTEEKIQAAQSIIQDLTESGMMPD 644
Query: 69 LHFYNGILNGLCRAKMIPDAYDL 1
LH YNG+LNGLCRA + DAY+L
Sbjct: 645 LHIYNGMLNGLCRANKMDDAYNL 667
>ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [Amborella trichopoda]
gi|548862790|gb|ERN20146.1| hypothetical protein
AMTR_s00066p00082400 [Amborella trichopoda]
Length = 992
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = -1
Query: 237 AHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPDLHFY 58
A + E+AR MLF LLPQK + + S +K+E AL++MR ++D+G+MPDLH Y
Sbjct: 730 AKRNEDARKMLFNLLPQKTMEPSRLEQRFSCNSFVEKIELALSLMRDMIDDGLMPDLHIY 789
Query: 57 NGILNGLCRAKMIPDAYDL 1
NG++NG CRA M+ +AYDL
Sbjct: 790 NGMINGFCRADMMGNAYDL 808
>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
gi|31429883|gb|AAP51872.1| hypothetical protein
LOC_Os10g02650 [Oryza sativa Japonica Group]
Length = 949
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = -1
Query: 249 QPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPD 70
+P LA KL+EAR+MLFR+LPQ + + E+ ++ A I++ + +NGM+PD
Sbjct: 663 RPSLAKKLKEARYMLFRMLPQI-IDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPD 721
Query: 69 LHFYNGILNGLCRAKMIPDAYDL 1
LH YNG++NGLCRA + DAY L
Sbjct: 722 LHIYNGMINGLCRANKMDDAYSL 744
>gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
Length = 906
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = -1
Query: 249 QPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPD 70
+P LA KL+EAR+MLFR+LPQ + + E+ ++ A I++ + +NGM+PD
Sbjct: 640 RPSLAKKLKEARYMLFRMLPQI-IDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPD 698
Query: 69 LHFYNGILNGLCRAKMIPDAYDL 1
LH YNG++NGLCRA + DAY L
Sbjct: 699 LHIYNGMINGLCRANKMDDAYSL 721
>gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
Length = 481
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = -1
Query: 249 QPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEYALNIMRIVVDNGMMPD 70
+P L KL+EAR+MLFR+LPQ + + E+ ++ A I++ + +NGM+PD
Sbjct: 215 RPSLDKKLKEARYMLFRMLPQI-IDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPD 273
Query: 69 LHFYNGILNGLCRAKMIPDAYDL 1
LH YNG++NGLCRA + DAY L
Sbjct: 274 LHIYNGMINGLCRANKMDDAYSL 296
>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Vitis vinifera]
Length = 1101
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 RRQPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEY-ALNIMRIVVDNGM 79
RR ++ R +L LL Q V + + N+L + + +K++Y ALN+M+ + +
Sbjct: 743 RRWYHVKSGSARVREILLHLLHQSFV-IPRENNLSFPRGSPRKIKYFALNLMQKIKGSSF 801
Query: 78 MPDLHFYNGILNGLCRAKMIPDAYD 4
MP+L+ YNGI++G CRA MI DAY+
Sbjct: 802 MPNLYLYNGIISGFCRANMIQDAYN 826
>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
Length = 970
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 RRQPYLAHKLEEARHMLFRLLPQKHVFLGKANHLHHYQSAEKKVEY-ALNIMRIVVDNGM 79
RR ++ R +L LL Q V + + N+L + + +K++Y ALN+M+ + +
Sbjct: 623 RRWYHVKSGSARVREILLHLLHQSFV-IPRENNLSFPRGSPRKIKYFALNLMQKIKGSSF 681
Query: 78 MPDLHFYNGILNGLCRAKMIPDAYD 4
MP+L+ YNGI++G CRA MI DAY+
Sbjct: 682 MPNLYLYNGIISGFCRANMIQDAYN 706