BLASTX nr result

ID: Zingiber24_contig00024186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00024186
         (302 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloro...    93   3e-17
gb|AFK38022.1| unknown [Medicago truncatula]                           92   5e-17
ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatu...    92   5e-17
gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma ca...    91   1e-16
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]            91   2e-16
ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin...    91   2e-16
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...    90   3e-16
ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citr...    90   4e-16
gb|ESW16632.1| hypothetical protein PHAVU_007G172400g [Phaseolus...    88   1e-15
ref|XP_006838265.1| hypothetical protein AMTR_s00103p00070570 [A...    88   1e-15
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro...    87   2e-15
ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloro...    87   2e-15
ref|XP_006658715.1| PREDICTED: ribosome-recycling factor, chloro...    87   2e-15
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro...    87   2e-15
ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group] g...    87   2e-15
ref|XP_002302112.2| Ribosome recycling factor family protein [Po...    87   3e-15
dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgar...    87   3e-15
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]       87   3e-15
ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [S...    86   4e-15
emb|CBI28691.3| unnamed protein product [Vitis vinifera]               85   9e-15

>ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cicer
           arietinum]
          Length = 265

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 49/64 (76%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTDDY+KKVDAI KQKEKE
Sbjct: 202 EEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYIKKVDAIYKQKEKE 261

Query: 183 LLTV 194
           LLTV
Sbjct: 262 LLTV 265


>gb|AFK38022.1| unknown [Medicago truncatula]
          Length = 262

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 48/64 (75%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTDDY+KKVDA+ KQKEKE
Sbjct: 199 EEGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKE 258

Query: 183 LLTV 194
           LLTV
Sbjct: 259 LLTV 262


>ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatula]
           gi|217072182|gb|ACJ84451.1| unknown [Medicago
           truncatula] gi|217072782|gb|ACJ84751.1| unknown
           [Medicago truncatula] gi|355479687|gb|AES60890.1|
           Ribosome-recycling factor [Medicago truncatula]
          Length = 262

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 48/64 (75%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTDDY+KKVDA+ KQKEKE
Sbjct: 199 EEGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKE 258

Query: 183 LLTV 194
           LLTV
Sbjct: 259 LLTV 262


>gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
          Length = 277

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 47/64 (73%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTD+YMKK+D+I KQKEKE
Sbjct: 214 EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIFKQKEKE 273

Query: 183 LLTV 194
           LLTV
Sbjct: 274 LLTV 277


>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
          Length = 278

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 48/64 (75%), Positives = 50/64 (78%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTD+YMKKVD I KQKEKE
Sbjct: 215 EEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKE 274

Query: 183 LLTV 194
           LLTV
Sbjct: 275 LLTV 278


>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
           gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 48/64 (75%), Positives = 50/64 (78%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTD+YMKKVD I KQKEKE
Sbjct: 198 EEGKVALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKE 257

Query: 183 LLTV 194
           LLTV
Sbjct: 258 LLTV 261


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 46/64 (71%), Positives = 49/64 (76%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTDDYMKK+D + KQKEKE
Sbjct: 215 EEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKE 274

Query: 183 LLTV 194
           LL V
Sbjct: 275 LLKV 278


>ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
           gi|568852089|ref|XP_006479713.1| PREDICTED:
           ribosome-recycling factor, chloroplastic-like [Citrus
           sinensis] gi|557546326|gb|ESR57304.1| hypothetical
           protein CICLE_v10021605mg [Citrus clementina]
          Length = 276

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 46/64 (71%), Positives = 50/64 (78%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTD+YMKK+D+I KQKEKE
Sbjct: 213 EEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQKEKE 272

Query: 183 LLTV 194
           LL V
Sbjct: 273 LLKV 276


>gb|ESW16632.1| hypothetical protein PHAVU_007G172400g [Phaseolus vulgaris]
          Length = 266

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/64 (71%), Positives = 49/64 (76%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKD SSDLQKLTDDY+KKV+ I KQKEKE
Sbjct: 203 EEGKVALRNIRRDALKAYDKLEKEKKLSEDNVKDFSSDLQKLTDDYIKKVETILKQKEKE 262

Query: 183 LLTV 194
           LLTV
Sbjct: 263 LLTV 266


>ref|XP_006838265.1| hypothetical protein AMTR_s00103p00070570 [Amborella trichopoda]
           gi|548840733|gb|ERN00834.1| hypothetical protein
           AMTR_s00103p00070570 [Amborella trichopoda]
          Length = 273

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/64 (70%), Positives = 50/64 (78%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLSSDLQK+TD Y+KK+D+I KQKEKE
Sbjct: 210 EEGKVAIRNIRRDAIKAYEKLEKEKKLSEDNVKDLSSDLQKVTDGYVKKIDSIYKQKEKE 269

Query: 183 LLTV 194
           L+TV
Sbjct: 270 LMTV 273


>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
           tuberosum]
          Length = 267

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/64 (70%), Positives = 49/64 (76%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLSSDLQK+TD+YMKK+D + KQKEKE
Sbjct: 204 EEGKVAIRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDTVFKQKEKE 263

Query: 183 LLTV 194
           LL V
Sbjct: 264 LLKV 267


>ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloroplastic-like
           [Brachypodium distachyon]
          Length = 266

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/64 (71%), Positives = 50/64 (78%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLS+DLQKLTD+YMKKV+AIQKQKE+E
Sbjct: 203 EEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVEAIQKQKEQE 262

Query: 183 LLTV 194
           L  V
Sbjct: 263 LSKV 266


>ref|XP_006658715.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Oryza
           brachyantha]
          Length = 242

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLS+DLQK+TD+YMKK++AIQKQKE+E
Sbjct: 179 EEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQE 238

Query: 183 LLTV 194
           L+ +
Sbjct: 239 LMKI 242


>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
           [Solanum lycopersicum]
          Length = 267

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 45/64 (70%), Positives = 49/64 (76%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLSSDLQK+TD+YMKK+D + KQKEKE
Sbjct: 204 EEGKVAIRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDIVFKQKEKE 263

Query: 183 LLTV 194
           LL V
Sbjct: 264 LLKV 267


>ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group]
           gi|158513666|sp|A2YMU2.2|RRFC_ORYSI RecName:
           Full=Ribosome-recycling factor, chloroplastic;
           Short=RRF; AltName: Full=Protein OsL8; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor gi|158513703|sp|A3BLC3.2|RRFC_ORYSJ RecName:
           Full=Ribosome-recycling factor, chloroplastic;
           Short=RRF; AltName: Full=Protein OsL8; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor gi|34394208|dbj|BAC84660.1| putative Ribosome
           recycling factor, chloroplast precursor [Oryza sativa
           Japonica Group] gi|113611583|dbj|BAF21961.1|
           Os07g0570700 [Oryza sativa Japonica Group]
           gi|218199871|gb|EEC82298.1| hypothetical protein
           OsI_26546 [Oryza sativa Indica Group]
           gi|222637311|gb|EEE67443.1| hypothetical protein
           OsJ_24808 [Oryza sativa Japonica Group]
          Length = 266

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLS+DLQK+TD+YMKK++AIQKQKE+E
Sbjct: 203 EEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQE 262

Query: 183 LLTV 194
           L+ +
Sbjct: 263 LMKI 266


>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
           gi|550344331|gb|EEE81385.2| Ribosome recycling factor
           family protein [Populus trichocarpa]
          Length = 286

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/64 (71%), Positives = 49/64 (76%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTD+YMKK+D I KQKEKE
Sbjct: 223 EEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKE 282

Query: 183 LLTV 194
           LL V
Sbjct: 283 LLKV 286


>dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326512904|dbj|BAK03359.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 266

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/64 (70%), Positives = 50/64 (78%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVAIRNIRRDA KAY           DNVKDLS+DLQK+TD+YMKKV+AIQKQKE+E
Sbjct: 203 EEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKITDEYMKKVEAIQKQKEQE 262

Query: 183 LLTV 194
           L  V
Sbjct: 263 LSKV 266


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/64 (71%), Positives = 49/64 (76%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKLTD+YMKK+D I KQKEKE
Sbjct: 223 EEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKE 282

Query: 183 LLTV 194
           LL V
Sbjct: 283 LLKV 286


>ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
           gi|241941260|gb|EES14405.1| hypothetical protein
           SORBIDRAFT_07g001230 [Sorghum bicolor]
          Length = 265

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 42/64 (65%), Positives = 51/64 (79%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           E+GKVAIRNIRRDA KAY           DNVKDLS+DLQK+TD+YMKK+D+IQKQKE+E
Sbjct: 202 EDGKVAIRNIRRDAIKAYDKLQKEKKLSEDNVKDLSADLQKVTDEYMKKIDSIQKQKEQE 261

Query: 183 LLTV 194
           L+ +
Sbjct: 262 LMKI 265


>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/64 (68%), Positives = 48/64 (75%)
 Frame = +3

Query: 3   EEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKE 182
           EEGKVA+RNIRRDA KAY           DNVKDLSSDLQKL D+YMKK++ I KQKEKE
Sbjct: 211 EEGKVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKE 270

Query: 183 LLTV 194
           LL V
Sbjct: 271 LLKV 274


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