BLASTX nr result

ID: Zingiber24_contig00023992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023992
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76536.1| unknown [Picea sitchensis]                              70   2e-10
ref|XP_006846953.1| hypothetical protein AMTR_s00017p00033560 [A...    69   5e-10
ref|XP_002962574.1| hypothetical protein SELMODRAFT_78419 [Selag...    60   4e-07

>gb|ADE76536.1| unknown [Picea sitchensis]
          Length = 389

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
 Frame = +2

Query: 23  SSGCLVVAEKFEGGQFVSDLLSRT---VTPIAPMSFHSYILSLVEDEASTEFKIVSSSKN 193
           S G L+VAE  +G   V +L ++T   + P+  M+    +  +V  E  +E++I+  S  
Sbjct: 142 SGGGLLVAENRKGFFVVCNLFTKTHKILPPMISMNSPFVVAMVVYPERDSEYQILVVS-- 199

Query: 194 VIDGGILRPSDCQVYNSSSRRWESSGQFPHHYAMLGNAILLNGMLFVLGRDPDHLLAFDL 373
            +DG        QVY+S S  W+  G F   +A++GN+  L+G LF L   PDHLLAFD+
Sbjct: 200 TVDG-----ITSQVYDSRSDSWKICGSFDGRFAVVGNSAHLDGFLFCLTHGPDHLLAFDV 254

Query: 374 KTRMWSVVD 400
               W +V+
Sbjct: 255 DAGTWDLVE 263


>ref|XP_006846953.1| hypothetical protein AMTR_s00017p00033560 [Amborella trichopoda]
           gi|548849982|gb|ERN08534.1| hypothetical protein
           AMTR_s00017p00033560 [Amborella trichopoda]
          Length = 380

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
 Frame = +2

Query: 23  SSGCLVVAEKFEGGQFVSDLLS---RTVTPIAPMSFHSYILSLVEDEASTEFKIVSSSKN 193
           S G L++AE  +G   + +  +   RT+ P+ PM +   +  +   ++S +   +S++  
Sbjct: 133 SHGGLILAEDRKGSLVLFNPFTKTCRTLPPMMPMKWPYVVAMMGSYDSSFKILAISTTDK 192

Query: 194 VIDGGILRPSDCQVYNSSSRRWESSGQFPHHYAMLGNAILLNGMLFVLGRDPDHLLAFDL 373
           +           QVY+     WE SG+F   +AM+G+A  LNG LF L   PD+LLA+D+
Sbjct: 193 I---------SSQVYDYGRNLWEMSGEFDGRFAMIGSAACLNGFLFCLSHGPDYLLAYDI 243

Query: 374 KTRMWSVVD 400
           +   W +V+
Sbjct: 244 RMGTWDLVN 252


>ref|XP_002962574.1| hypothetical protein SELMODRAFT_78419 [Selaginella moellendorffii]
           gi|300169435|gb|EFJ36037.1| hypothetical protein
           SELMODRAFT_78419 [Selaginella moellendorffii]
          Length = 399

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
 Frame = +2

Query: 32  CLVVAEKFEGGQFVSDLLSRTVTPIAPMSFHS--YILSLVEDEASTEFKIVSSSKNVIDG 205
           CL       G  FVS+ ++R    +  M      Y++ +V D+    +KI+ +     DG
Sbjct: 155 CLEGTGSQSGTMFVSNPITRVYKKLPRMIAMKSPYVVGMVVDDEMKSYKILVAQ----DG 210

Query: 206 GILRPSDCQVYNSSSRRWESSGQFPHHYAMLGNAILLNGMLFVLGRDPDHLLAFDLKTRM 385
             L     QVY+SS+ RW  +G +    A+L  A   NG+LF L   P+ LLAFDL+   
Sbjct: 211 ETLAS---QVYDSSTNRWSLTGVYHRRTAILAGATFYNGLLFCLTFSPNGLLAFDLERGQ 267

Query: 386 W 388
           W
Sbjct: 268 W 268


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