BLASTX nr result

ID: Zingiber24_contig00023964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00023964
         (968 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDI75298.1| hypothetical protein EPH_0004900 [Eimeria praecox]     66   2e-08
ref|XP_001008644.1| Bifunctional endo-1,4-beta-xylanase xylA pre...    57   8e-06

>emb|CDI75298.1| hypothetical protein EPH_0004900 [Eimeria praecox]
          Length = 174

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 41/127 (32%), Positives = 53/127 (41%)
 Frame = -3

Query: 438 EQIQNCRSALNQSCRRQNHQNGQNLNHRSPRNC*SALSQSHWNLQIDRNWSHQSPQNCQS 259
           +Q Q+ +    Q  + Q HQN Q   H+  +N      Q H   Q  +   HQ  QN Q 
Sbjct: 33  QQQQHQQHQNQQPQQHQQHQNQQQQQHQQHQN-----QQQHQQHQNQQQQQHQQHQNQQQ 87

Query: 258 VPNQSRQNLQIDQNWNHQRNQNGLIPSHQNCLNVHQNHGNDHKNHQCFRHDQSLNHPSDH 79
             +Q  QN Q  Q+  HQ  Q      HQN     Q H   H+N Q  +H Q  N     
Sbjct: 88  QQHQQHQNQQQQQHQQHQNQQQQQHQQHQN--QQQQQHQQQHQNQQQQQHQQHQNQQQQQ 145

Query: 78  HHLHKNQ 58
           H  H+NQ
Sbjct: 146 HQQHQNQ 152



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
 Frame = -3

Query: 438 EQIQNCRSALNQSCRRQNHQNGQNLNHRSPRNC*SALSQSHWNLQIDRNWSHQSPQNCQS 259
           +Q Q+ +    Q  + Q HQN Q   H+  +N      Q H N Q  ++  HQ+ Q  Q 
Sbjct: 11  QQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQPQQHQQHQNQQQQQHQQHQNQQQHQQ 70

Query: 258 VPNQSRQNLQIDQN---WNHQRNQNGLIPSHQNCLNVHQNHGNDHKNHQCFRHDQS-LNH 91
             NQ +Q  Q  QN     HQ++QN     HQ   N  Q     H+N Q  +H Q   N 
Sbjct: 71  HQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQQHQNQ 130

Query: 90  PSDHHHLHKNQ 58
               H  H+NQ
Sbjct: 131 QQQQHQQHQNQ 141



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
 Frame = -3

Query: 393 RQNHQNGQNLNHRSPRNC*SALSQSHWNLQIDRNWSHQSPQNCQSVPNQSRQNLQIDQNW 214
           +Q  QN Q   H+  +N      Q H N Q  ++  HQ+ Q  Q   +Q++Q  Q  Q+ 
Sbjct: 4   KQQQQNEQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQPQQHQQHQNQQQQQHQQHQ 63

Query: 213 N---HQRNQNGLIPSHQNCLNVHQNHGNDHKNHQCFRHDQSLNHPSDHHHLHKNQ 58
           N   HQ++QN     HQ   N  Q     H+N Q  +H Q  N     H  H+NQ
Sbjct: 64  NQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQ 118



 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
 Frame = -3

Query: 408 NQSCRRQNHQNGQNLN-HRSPRNC*SALSQSHWNLQIDRNWSHQSPQNCQSVPNQSRQNL 232
           +Q+ ++Q HQ  QN   H+  +N      Q H N Q  ++  HQ+ Q  Q   +Q++Q  
Sbjct: 51  HQNQQQQQHQQHQNQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQ 110

Query: 231 QIDQNWNHQRNQNGLIPSHQNCLNVHQNHGNDHKNHQCFRHDQSLNHPSDHHHLHKNQ 58
           Q  Q+ N Q+ Q+      Q   N  Q     H+N Q  +H Q  N     H  H+NQ
Sbjct: 111 QHQQHQNQQQQQH-----QQQHQNQQQQQHQQHQNQQQQQHQQHQNQQQQQHQQHQNQ 163


>ref|XP_001008644.1| Bifunctional endo-1,4-beta-xylanase xylA precursor, putative
           [Tetrahymena thermophila] gi|89290411|gb|EAR88399.1|
           hypothetical protein TTHERM_00163900 [Tetrahymena
           thermophila SB210]
          Length = 563

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
 Frame = -3

Query: 429 QNCRSALNQSCRRQNHQNGQNLNHRSPRNC*SALSQSHWNLQIDRNWSHQSPQNCQSVPN 250
           QN ++  NQ+  +QN+QN QN N  + +N  +   Q +   Q ++N + Q+ QN Q+   
Sbjct: 305 QNNQNQNNQNNNQQNNQNSQNNNQNNNQN--NQNGQQNNQNQNNQNNNQQNNQNSQNNNQ 362

Query: 249 QSRQNLQIDQ------NWNHQRNQNGLIPSHQNCLNVHQNHGNDHKNHQCFRHDQSLNHP 88
            + QN Q +       N N+Q NQ        N  N +QN+ N+ +N+Q  +++   N+ 
Sbjct: 363 NNNQNNQQNNQNGQNNNQNNQNNQQNNQNGQNNNKNNNQNNQNNQQNNQNGQNNNQNNNQ 422

Query: 87  SDHHHLHKNQN 55
           +D ++   NQN
Sbjct: 423 NDQNNQQNNQN 433


Top