BLASTX nr result
ID: Zingiber24_contig00023923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00023923
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 88 1e-15
ref|XP_002312419.1| RING-H2 zinc finger protein RHA2a [Populus t... 84 3e-14
ref|XP_002892849.1| ring-H2 finger A2A [Arabidopsis lyrata subsp... 81 2e-13
ref|XP_006468778.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 80 3e-13
ref|XP_006448343.1| hypothetical protein CICLE_v10016906mg [Citr... 80 3e-13
ref|XP_006416944.1| hypothetical protein EUTSA_v10008995mg [Eutr... 79 8e-13
gb|EOX99992.1| RING-H2 finger A2A, putative [Theobroma cacao] 79 8e-13
ref|XP_006303368.1| hypothetical protein CARUB_v10010511mg [Caps... 78 1e-12
gb|EXB65574.1| E3 ubiquitin-protein ligase RHA2A [Morus notabilis] 78 1e-12
ref|XP_002314830.2| hypothetical protein POPTR_0010s12800g, part... 78 1e-12
ref|XP_004300948.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 78 1e-12
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm... 76 4e-12
ref|NP_172962.1| E3 ubiquitin-protein ligase RHA2A [Arabidopsis ... 76 5e-12
ref|XP_006344186.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 75 9e-12
ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi... 75 1e-11
gb|ESW35613.1| hypothetical protein PHAVU_001G249600g [Phaseolus... 74 2e-11
ref|XP_004239405.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 74 2e-11
gb|EPQ28375.1| hypothetical protein PFL1_04202 [Pseudozyma flocc... 74 3e-11
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 74 3e-11
ref|XP_757391.1| hypothetical protein UM01244.1 [Ustilago maydis... 73 4e-11
>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
Length = 162
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
++L +R F + G A + C VCLC L DGD+VRR+ C HVFH++C DGWL L
Sbjct: 71 EQLNLNRVFSYRYGEDGGAASD---CVVCLCRLRDGDQVRRLACRHVFHKECFDGWLDHL 127
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N +CPLCR LV+ E A RR+G
Sbjct: 128 NFNCPLCRSPLVSDERVALTQRRVG 152
>ref|XP_002312419.1| RING-H2 zinc finger protein RHA2a [Populus trichocarpa]
gi|222852239|gb|EEE89786.1| RING-H2 zinc finger protein
RHA2a [Populus trichocarpa]
Length = 168
Score = 83.6 bits (205), Expect = 3e-14
Identities = 34/60 (56%), Positives = 43/60 (71%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 1
C VCLC L DGD+VR++ C HVFH++C DGWL LN +CPLCR+ LV+ E RR+G
Sbjct: 99 CVVCLCTLRDGDQVRKLDCRHVFHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVG 158
>ref|XP_002892849.1| ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]
gi|297338691|gb|EFH69108.1| ring-H2 finger A2A
[Arabidopsis lyrata subsp. lyrata]
Length = 146
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
D+L+ +R F + G ++ C VCL L +G+ VR++ C HVFH+ CL+GWL QL
Sbjct: 64 DQLSLNRLFSYRCGDGGGSD-----CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQL 118
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N +CPLCR LV+ + + RR+G
Sbjct: 119 NFTCPLCRSALVSDDCVSKTQRRVG 143
>ref|XP_006468778.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Citrus sinensis]
Length = 179
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 1
C VCLC L DG+ VR++ C HVFH+DCLDGWL LN +CPLCR +V+ E RR+G
Sbjct: 110 CMVCLCTLRDGELVRKLDCRHVFHKDCLDGWLHHLNFNCPLCRSPVVSEERVWNTRRRVG 169
>ref|XP_006448343.1| hypothetical protein CICLE_v10016906mg [Citrus clementina]
gi|567912061|ref|XP_006448344.1| hypothetical protein
CICLE_v10016906mg [Citrus clementina]
gi|557550954|gb|ESR61583.1| hypothetical protein
CICLE_v10016906mg [Citrus clementina]
gi|557550955|gb|ESR61584.1| hypothetical protein
CICLE_v10016906mg [Citrus clementina]
Length = 178
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 1
C VCLC L DG+ VR++ C HVFH+DCLDGWL LN +CPLCR +V+ E RR+G
Sbjct: 109 CMVCLCTLRDGELVRKLDCRHVFHKDCLDGWLHHLNFNCPLCRSPVVSEERVWNTRRRVG 168
>ref|XP_006416944.1| hypothetical protein EUTSA_v10008995mg [Eutrema salsugineum]
gi|557094715|gb|ESQ35297.1| hypothetical protein
EUTSA_v10008995mg [Eutrema salsugineum]
Length = 153
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
D+L +R F + G +E C VCL L +G+ VR++ C HVFH+ CL+GWL L
Sbjct: 64 DQLNLNRLFSYRCGDEGGSE-----CVVCLSKLKEGEEVRKLECRHVFHKQCLEGWLHHL 118
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N CPLCR LVA + RR+G
Sbjct: 119 NFICPLCRSALVADGCVSRTQRRVG 143
>gb|EOX99992.1| RING-H2 finger A2A, putative [Theobroma cacao]
Length = 164
Score = 78.6 bits (192), Expect = 8e-13
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 1
C VCLC L DG++VR++ C HVFH+DC DGWL LN +CPLCR L + RR+G
Sbjct: 95 CVVCLCTLRDGEQVRKLDCCHVFHKDCFDGWLDHLNFNCPLCRSPLKTDQRVKTTPRRVG 154
>ref|XP_006303368.1| hypothetical protein CARUB_v10010511mg [Capsella rubella]
gi|482572079|gb|EOA36266.1| hypothetical protein
CARUB_v10010511mg [Capsella rubella]
Length = 160
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
D+L+ +R F + + G C VCL L +G+ VR++ C HVFH+ CL+GWL L
Sbjct: 66 DQLSLNRLFSYRCDADGGGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKQCLEGWLHHL 125
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N +CPLCR LV+ + RR+G
Sbjct: 126 NFTCPLCRSALVSDLSVSKTQRRVG 150
>gb|EXB65574.1| E3 ubiquitin-protein ligase RHA2A [Morus notabilis]
Length = 161
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
++L +R F + S G C VCL L GD+VRR+ C HVFH+DC DGWL L
Sbjct: 64 EQLNLNRVFSYRYSDGGAGGGSD--CVVCLSTLTPGDQVRRLSCRHVFHKDCFDGWLGHL 121
Query: 75 NLSCPLCRYRLVAPELRAAADRRI 4
N SCPLCR LV+ AAAD +
Sbjct: 122 NFSCPLCRSPLVS---AAAADESV 142
>ref|XP_002314830.2| hypothetical protein POPTR_0010s12800g, partial [Populus
trichocarpa] gi|550329677|gb|EEF01001.2| hypothetical
protein POPTR_0010s12800g, partial [Populus trichocarpa]
Length = 135
Score = 77.8 bits (190), Expect = 1e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPE 31
C VCLC L GD+VRR+ C HVFH++C DGWL LN +CPLCR+ LV+ E
Sbjct: 85 CVVCLCTLRHGDQVRRLDCCHVFHKECFDGWLDHLNFNCPLCRWPLVSDE 134
>ref|XP_004300948.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Fragaria vesca
subsp. vesca]
Length = 170
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
++L + F + E P C VCL + DGDRVR + C H+FH+ C DGWL QL
Sbjct: 74 EQLNLNSLFSYRYDHSRHREGAVPDCIVCLSAMKDGDRVRMLHCRHLFHKHCFDGWLDQL 133
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N SCP+CR LV E RR+G
Sbjct: 134 NFSCPICRSPLVHEERVNQTRRRVG 158
>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
gi|223534385|gb|EEF36093.1| conserved hypothetical
protein [Ricinus communis]
Length = 183
Score = 76.3 bits (186), Expect = 4e-12
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVA 37
C VCLC L+DGD+VR++ C HVFH+DC D WL QL +CPLCR LV+
Sbjct: 114 CVVCLCALSDGDQVRKLDCRHVFHKDCFDDWLRQLKFNCPLCRSPLVS 161
>ref|NP_172962.1| E3 ubiquitin-protein ligase RHA2A [Arabidopsis thaliana]
gi|50401214|sp|Q9ZT50.1|RHA2A_ARATH RecName: Full=E3
ubiquitin-protein ligase RHA2A; AltName: Full=RING-H2
zinc finger protein RHA2a
gi|5103808|gb|AAD39638.1|AC007591_3 Identical to
gb|AF078822 RING-H2 finger RHA2a protein from
Arabidopsis thaliana. ESTs gb|N37587, gb|T04684,
gb|AA394318, gb|Z35014 and gb|AA713343 come from this
gene [Arabidopsis thaliana] gi|3790569|gb|AAC68671.1|
RING-H2 finger protein RHA2a [Arabidopsis thaliana]
gi|19715570|gb|AAL91611.1| At1g15100/F9L1_3 [Arabidopsis
thaliana] gi|20334914|gb|AAM16213.1| At1g15100/F9L1_3
[Arabidopsis thaliana] gi|21593875|gb|AAM65842.1|
putative RING-H2 zinc finger protein [Arabidopsis
thaliana] gi|66865898|gb|AAY57583.1| RING finger family
protein [Arabidopsis thaliana]
gi|332191143|gb|AEE29264.1| E3 ubiquitin-protein ligase
RHA2A [Arabidopsis thaliana]
Length = 155
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
D+L+ +R F + G + C VCL L +G+ VR++ C HVFH+ CL+GWL Q
Sbjct: 64 DQLSLNRLFSYRCGDGGGGGSD---CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQF 120
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N +CPLCR LV+ + + R +G
Sbjct: 121 NFTCPLCRSALVSDDCVSKTQRSVG 145
>ref|XP_006344186.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Solanum
tuberosum]
Length = 169
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRI 4
C VCL L DGDRVR++ C HVFH +CLDGW LN +CPLCR V+ E A RR+
Sbjct: 100 CVVCLNRLGDGDRVRKLACRHVFHMECLDGWFNTLNFNCPLCRSTSVSGERVVRARRRV 158
>ref|XP_003638419.1| RING finger protein [Medicago truncatula]
gi|355504354|gb|AES85557.1| RING finger protein
[Medicago truncatula] gi|388513305|gb|AFK44714.1|
unknown [Medicago truncatula]
Length = 164
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = -1
Query: 255 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 76
D+L+ + F + A+ R C C + +GD VR++PC HVFHR CL+GW +
Sbjct: 72 DQLSLNNQFFYKYEDAASADNHR--CVFCQSNFENGDHVRKLPCRHVFHRHCLNGWFHRF 129
Query: 75 NLSCPLCRYRLVAPELRAAADRRIG 1
N +CPLCR L + E A +RR+G
Sbjct: 130 NFNCPLCRCSLHSDERVALTERRVG 154
>gb|ESW35613.1| hypothetical protein PHAVU_001G249600g [Phaseolus vulgaris]
Length = 165
Score = 74.3 bits (181), Expect = 2e-11
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPEL 28
C VCLC+L +G++VR++ C H+FHRDCLD WL Q +CPLCR ++V P++
Sbjct: 74 CRVCLCELEEGEKVRKLQCHHMFHRDCLDKWLQQYWATCPLCRKQVVPPDV 124
>ref|XP_004239405.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Solanum
lycopersicum]
Length = 171
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRR 7
C VCL L DGDRVR++ C HVFH +CLDGW LN +CPLCR VA E R +RR
Sbjct: 102 CVVCLNRLGDGDRVRKLACRHVFHTECLDGWFNTLNFNCPLCRSTSVAGE-RVVRERR 158
>gb|EPQ28375.1| hypothetical protein PFL1_04202 [Pseudozyma flocculosa PF-1]
Length = 669
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = -1
Query: 246 AADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLS 67
+A+R+ FL R CA+CLCD DGDRVR +PCGH+FHR +D WL+++
Sbjct: 536 SANRSHSFLPPGRTYFSTDE--CAICLCDFVDGDRVRVLPCGHIFHRQEIDDWLVRVKKL 593
Query: 66 CPLCRYRLVAP 34
CP+C+ + P
Sbjct: 594 CPICKRDITVP 604
>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
Length = 169
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/60 (51%), Positives = 37/60 (61%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 1
C VC DGD+VR +PC HVFHR C DGWL +CPLCR L + E A +RR+G
Sbjct: 100 CVVCQATFEDGDQVRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLG 159
>ref|XP_757391.1| hypothetical protein UM01244.1 [Ustilago maydis 521]
gi|46096618|gb|EAK81851.1| hypothetical protein
UM01244.1 [Ustilago maydis 521]
Length = 653
Score = 72.8 bits (177), Expect = 4e-11
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = -1
Query: 180 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAP 34
CA+CLCD DGDRVR +PCGH+FHR +D WL+++ CP+C+ + P
Sbjct: 535 CAICLCDFVDGDRVRVLPCGHIFHRQEVDDWLVRVKKLCPICKRDITVP 583